Girardinichthys multiradiatus (darkedged splitfin): 124870242
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Entry
124870242 CDS
T08099
Symbol
ptch2
Name
(RefSeq) protein patched homolog 1
KO
K11101
patched 2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124870242 (ptch2)
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Ortholog
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GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
YmdA
Motif
Other DBs
NCBI-GeneID:
124870242
NCBI-ProteinID:
XP_047224756
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All DBs
Position
6:complement(22641711..22671244)
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AA seq
1488 aa
AA seq
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MASDRGVPGSGVFGDLPPSYKRSQPPAHPDLQRRPSYCHAAFALKQISKGKAVGQKAPLW
IRARFQALLFSLGCHIQSHCGKVLFIGLLVFGALSVGLRVAAIETNIEQLWVEAGSRVST
ELRYTREKQGEESVFTSQMLIQTPKEEGTNILTQEALLVHMEAALSASKVQVSLFGKSWD
LNKICYKSGVPIIENVMIERMIDKLFPCMIITPLDCFWEGAKLQGGSAYLPGMPDIQWMN
LDPVKLMEELGQYTSLEGFKEMLDKAQVSHAYMDRPCLDPSDTDCPLSAPNKEQEETPDI
AGRLQGGCHGFSQKFMHWQEELILGGRVKSSQDTLLSAEALQTMFLLMSPKQLYEHFKDD
YEIHDINWNEEKATAILESWQRKFVEVVHQSIPGNSSQSIHAFSTTTLNDIMKSFSDVSV
IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVMLVALSVAAGLGLCSLLGLSFNAAT
TQVLPFLALGIGVDDMFLLAHSFTETGSNIPFKERTGDCLRRTGTSVALTSINNMIAFFM
AALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCLYSPCANR
VIHLSAQELSEAGEQSHTPGAGTTHAHQYTAGPTITTSTQITTTVQAFTQCDAAGQHIVT
ILPPTSQISTSSPSIIVCPTTQTHAVSPSPTTTSVPDPYGSQLFTPTSSSTRDLLAQVED
SKSGKKCVPLPFLHWNLSIFAREKYAPLLLKPKSKVAVVVLFLGLLSLSLYGTTMVHDGL
YLTDIVPRDTKEYDFIDAQFKYFSFYNMYLVTMDGFDYAQSQRLLVQLHNAFNSVRYVVR
DSDNKLPRMWLHYFQDWLKGLQAAFDADWQAGRITADSYRNGTEDGALAYKLLIQTGSKK
EPFNRSQLTSRRLVDAEGLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYD
TTGENLRIPSAEPLEFAQFPFYLNGLRQASDFVEAIESVRAICDEFSRKGVLNYPNGHPF
LFWEQYIGLRHWFLLSISVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIG
IKLSAIPVVILIASVGIGVEFTVHIALGFLTAIGNRNKRSAVALEHMFAPVVDGAISTLL
GVLMLAGSEFDFIMRYFFAVLAILTVLGMLNGLVLLPVLLSMMGPPAEVTPVDNASCMPT
PSPEPPLPPPMAHHGYFTGLNHPRSSRPQAFSESSDSEYYSELTTTSGIGEEDYKYCDRS
AYQASHTAAPSATSHILVEASKNPSFPKLTVLKPFRENAAGGRVEPICESTHNMQSPPQV
TCWDGNKQEQQSDLQRLQAQSAHGLPSDKANFPGRTYQSGPRLQNSRGPLPNRTKGQSYG
HSNSSLPTQQGPTGGPVTMVTATASVTVAVHPTLPGATYQGYMHEGFDMDSELDCFEAAK
RTCGDKAKYSSCNRDSLELQDLEATRVQTEYQLGKSQGGLRIQASKDC
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggatcgcggggtcccagggtccggcgtctttggagatttacccccgagctat
aagcgctcccagccgcctgcgcacccagacctgcagcggagacccagctactgccatgcc
gctttcgcacttaaacagatctcaaagggaaaggcagtaggtcagaaagctcctctgtgg
atccgggcgaggttccaggccttgctgttctctctgggctgccacatccagagccactgc
gggaaggtcctctttattggactcttggtgttcggggctttgtctgtgggactccgggtg
gcagctatcgaaaccaacattgagcagctgtgggtggaagctggcagccgggtgagcaca
gagcttcgctacaccagggagaagcagggagaagagtcagtatttacctcgcagatgctc
atccagacccccaaagaagagggcactaatattctaacacaggaggctttgctggttcac
atggaggcggcgctgtctgccagcaaggtgcaggtgtcgctgtttggaaaatcatgggat
ctcaataagatatgctacaaatccggagttcctattatagaaaatgtcatgattgaaagg
atgattgacaagcttttcccatgtatgataatcaccccattggactgtttctgggaaggg
gccaaactacaaggaggttctgcctatttaccgggcatgccagatatccagtggatgaat
ttagatcctgtcaagctgatggaagaactgggccagtacacgtccctggaaggttttaaa
gagatgctggacaaagcccaggtgagtcacgcctacatggacagaccatgcctcgacccg
tcagacaccgactgtcccctcagtgctcccaataaggaacaggaagagactccggacatt
gctgggcgtctccagggtggatgccacggcttcagtcagaagttcatgcactggcaggag
gagctcattctgggagggcgggtcaaaagcagccaggatactctactaagtgcggaggct
ctccaaactatgttcctgttgatgagtcccaagcagctctatgaacacttcaaagacgac
tacgagatccacgacatcaactggaacgaggaaaaggccaccgccatccttgagtcctgg
cagaggaagtttgtggaggtcgtccaccagagtattcctggtaattccagtcagtccatc
cacgccttctccacaaccaccctcaatgacatcatgaagtcgttctctgacgtcagtgtc
atcagggtggctggaggatacttgctcatgttggcctacgcctgtgtgacgatgctcagg
tgggactgtgccaagtcgcagggggctgttggactggcaggggtgatgctagtagccctg
tcggtggcagcaggactgggtctctgctccctacttggcctctccttcaatgctgcaact
acgcaggtgcttcccttcctggcgctagggattggtgtggatgacatgtttctgttggct
cactccttcacagagacaggaagtaatatcccctttaaggagcgaacaggagactgcttg
cgtcgcaccggcaccagcgtggctctgacttccataaacaacatgatcgcgttcttcatg
gctgccctggtgcccatcccggccttgcgagcattctctctacaggcggccattgtggtt
gtatttaatttcgccatggtgctgctcatcttccctgccatcctcagcttggacctccac
aggcgtgaggacaagcgtttggacattctctgctgcctgtacagcccctgtgccaatcgc
gtcattcacctctcggcacaggagctttcggaagccggcgagcagtctcacacgcctggg
gcgggcacgactcatgcacaccagtatactgccggaccgacaatcaccaccagcacccag
atcaccacaacagtgcaggcatttacacagtgtgatgcagcaggccagcatattgtcaca
attctgccaccgacttcacagatctccacaagctctccctccatcattgtctgccccact
acacagactcacgctgtctcaccttctccaaccaccacctctgtgccagacccttacggc
tcccagctcttcactccaacctccagctccacgcgggacctcctagcccaggtggaagac
tccaaatcggggaagaaatgcgtcccactccccttccttcactggaacctgtccatcttc
gcccgggaaaagtacgcccccctgctcttgaagcccaagagcaaagttgcagtggtggtc
ctcttcctggggctgctgagccttagcctatacgggaccactatggtccacgatggcctc
tatctgaccgacatcgtgccccgcgacaccaaggaatacgactttatcgacgcacagttc
aagtacttctccttctacaacatgtacctggtgaccatggatgggttcgactacgcccag
tctcaaaggctgctggttcagctgcacaatgctttcaactctgtcagatatgtggtcaga
gatagcgacaacaagctgccccgcatgtggttgcactatttccaggactggctgaaaggt
cttcaggctgcttttgatgctgactggcaggctggccggattacagctgacagctatagg
aacggcacagaagatggagctctggcgtacaagctgctcatccagacaggctccaagaaa
gagcctttcaaccgcagccagctgacctctcgccggctggtggatgccgagggtttgatc
cccccagaggtgttttacatttacctgaccgtgtgggttagtaacgatcctctgggctat
gccgcatcccaggccaacttctaccctcaccccagagagtggattcatgacaagtatgac
accacaggagaaaatctgcgcatcccatcagcggagcctctggagtttgcccagtttccc
ttctacctgaacggccttcggcaggcgagtgactttgtggaggccatcgagagcgtgcgt
gccatttgtgatgagttcagccgcaagggcgtgctcaactaccctaacggacaccccttc
ctgttctgggagcagtacatcggcctccgtcactggttcttgctgtcgattagtgttgtg
ctggcctgtaccttcctggtctgtgccattctcctgcttaacccctggactgctggcatc
attgtgtttattttggccatgatgactgtggagttgtttggcatcatgggcctaattggc
atcaagctcagtgccattcctgtggtcatcctgattgcatcggtgggcatcggcgtggag
tttacggttcacatagccctgggcttcctgacagcaattggcaacaggaacaagcgttca
gcggtggccctggaacatatgtttgccccagtggtcgacggtgcaatctccacgttgctg
ggtgttcttatgctggcaggatcagagtttgacttcatcatgaggtatttttttgccgtg
cttgccattctgactgtgttggggatgctgaatggcttagttctcctcccagtcctcctc
tccatgatgggccctccagctgaagtcaccccggtcgacaacgctagctgcatgccgaca
ccttcccccgagcccccgctgcctcctccaatggcccaccacggatacttcacgggcctc
aaccacccacgctcatcccggccacaagcattttctgagtcgtcagattctgaatattac
tctgagttgacgacgacatctgggatcggggaggaggattataagtactgtgacaggagc
gcgtaccaagcgtcgcacactgcagctccatctgcaacgtctcatatactggtggaagcc
agcaagaatccaagcttccccaaactgacggtgctgaagccgtttagagaaaacgcagca
ggtgggagggttgaaccaatatgtgaatccacccacaatatgcaatcacctccccaggtg
acgtgctgggatggaaacaagcaggagcagcagagtgaccttcagagactgcaggctcag
tcagctcacggcttacccagcgacaaagctaattttcctgggaggacttatcaaagtggc
cccaggctgcagaacagcagagggcctctgccaaacaggactaaagggcagagctatggt
cacagcaactcttccctgccaacgcaacaaggccccactgggggccctgttaccatggtc
acggccacggcctctgtcacagtggccgtgcatccgaccctaccgggggccacctatcaa
ggctacatgcatgaaggttttgacatggacagcgagttggactgttttgaagctgctaaa
aggacttgtggtgacaaagcaaaatattcttcatgcaacagagactctctagagctccaa
gacttggaggcaacacgggtccagacagaatatcaactaggcaagtcacaaggtgggctg
aggatccaagcatccaaagactgctaa
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