Girardinichthys multiradiatus (darkedged splitfin): 124870506
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Entry
124870506 CDS
T08099
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124870506 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124870506 (chd8)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124870506 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
124870506
NCBI-ProteinID:
XP_047225190
LinkDB
All DBs
Position
6:complement(12307351..12336712)
Genome browser
AA seq
2608 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQGSSDPVEEALKLALGQAVPTGEPESTPDLAVSS
SLGVPVAAPVISDPAPVHVPTQQPVPVAPVQTVSVAPAIEAGAATFMTSAPVPVETVPQL
QAQSTIPVASNTSGVSSTTVLLSSPLTVSSSPATTTTATTQQLTQITHQLTPQQLAAITQ
QAGGKIVILKGPQGQAQVLQAVSGTTGQTGGKVIRLLSGTTLKPGMSILQGGTVLNQASP
GQTQVKVGATGVQRLLQSANGPVKQVLLTSMPQQTHGQSVQVQIPAQAQMSQGQTTVQVQ
PQAQIQIQPQAQIQIQAQAAQIQVQPPGQAAQTQVQTQGQVQLQPAMQGQAQGGEAKRIT
LVLQQPSQAGSATPGGQAVTAQQQVTPGGQQQQTQTPARLVLGQLPSGKLVLQGSQLAAL
TQARAAGQAGGQPKVLTIQLQVQQQPNQQGGVKYQLVSGTGGTGGPQVLQISQGQGGQRV
AVPLKMLLQPQTSSATSSGGTVSVVKVINPSTAAPSATTTSPSQAIRITKAPGEPAAVRR
VEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELPTTQTSPEMGGVLTVVSAAKKK
SSCGGSKKKSPVSGGPIPKIIVGTDKKGKVLKISGGTIAVSGGPVIPGAGNKSKSKVKAN
TITLVGAKKRKRNASSDVSDGELSPPSPVALEDDMIMKRRSNRVVKRKKYTEDLDIKITD
DEDEQEDVDVTTTAAAVASISGGAAAQLKQEVELDGDGLPSMQFFVENPSEEDAAIVDKV
LSMRIIKKEVSPSHYTTAEEFFVKYKNYSYLHCEWATLEQLEKDKRIHQKIKRFKTKHAQ
MRHLFQEDEEPFNPDYVEVDRILDVSHSVDKDNGEPVIYYLVKWCSLPYEDATWELKEDV
DEGKVEEFGKIQNRQPRLKRTARPAASAWKKLEETREYKNGNTLREYQLEGVNWLLFNWY
NRQNCILADEMGLGKTIQSITLLSEVYATGIQGPFLVIAPLSTITNWEREFSTWTHMNAI
VYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMVLSDCPELREIAWRCVII
DEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLR
EFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDIQKKYYRAILER
NFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIVAELREKYDPLAPDFHLQ
ALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGN
LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRI
GQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDSNVNGLQQFSKKEIED
LLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRTD
IALDDPEFWQKWAKKADIDMDSFNQKNTLVIDTPRIRKQTRQYSSLRGEGGDLSDLDSDD
EYPPANSRHSRSSRRSDRHSGGGYGRTDCFRVEKHLLVYGWGRWRDILAHARCKRRLSER
DVETICRVILVFCLMHYRGDENIKSFIWELITPPENGREPQTLLNHSGLSIPVPRGRKGK
RVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHA
DSVLKGADIRDVDIWMPEMEQQEVPAAWWDSDADRSLLAGVFKHGYEMYTTMRADPCLCF
VERVGRPDDKAIDAEQHTGDAELGDDADFDKFSEDPEFKPASRLSKDLFDEPDSMNVDDE
ISVEDKTIPVGTESATSQSGVCEWPSSSSLTARLRRLITAYQRSYRQEQLKIEAEAKGDR
RRRRCEQASKLKEIARQERQQRWTRREESDFYRVVSTFGVEKIKKEPGVSEEREAEFDWT
RFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRPGREDSSELTQTVAPITEERASRTLY
RISLLRRLRERVLPHPSLEEHLLLAPRSSELPAWWTMPDHDRQLMLGAALHGVSRTELSI
FSDPQFTFSSARDEFIQNQQALPPPPPPPPIMTFSQPKSELELPGVKVEGTDESPQLFGG
GISTALQSTPLSHLGSKLQGQDWSFKSSRESTEKPGRKGDGGSDSDSDSDSGSSSSERSG
SSDESGDSDEEVEGGAMKVGNVDEENSLLSMTPSQNSILPPEPIRLDWPKDRVLINRLDN
LCNLVLTGQWPSGRRYIPEAQLHQSSELVGEEMAYTRVIRKPSSTPGGIGAEGEDGEFTV
KLLKEEGLKLTFSKQALMPNGSGGEGSGRKKRKDQELSELDGIHDPLERTPRRRDPPTWL
KENPDYEVEGDMLELLVNRSKRKRRRRANKPLTGTEKVKVINMLTGKKVGAAFCPMLQDL
KEYLEENPNIAVAPDWSETVQKSGLLPESLFHRLLTENSEIPKKSHRRRHHHHHHHHHHH
YHTPEPTPEDPNLDGVEEETLVSDGAYMMDEEDLETSHHFLTSPDFDVKMEGGDSLSQGD
YDSSDQEALLDDVIMAQKDSDSSSSSED
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccattatggacctctttgaggacactcccctgtttaacctggacgccctg
ccggatgactccttctctcagggttcctctgacccggttgaggaagctctaaagctggcc
ttgggtcaggccgtcccaacaggggagccagagtctactcctgaccttgccgtcagttcc
agccttggcgttcctgtagcagctccagtcatctcagaccccgctcctgttcacgttccc
acccagcagccggtgccagtggcgcctgttcagactgtttctgttgctccagcaatcgaa
gccggagctgcaactttcatgacctcagctcctgtcccagttgagactgtgccacagttg
caggcccagtcaaccatccctgttgccagcaacaccagtggggtttccagtaccactgtc
ctgctgagctcacctctgactgtttccagctctccagctaccaccaccactgccaccacg
cagcagctgactcagataacccaccagctcactcctcagcagttagccgccatcacacag
caagctggtgggaaaatcgttattctcaaaggtccgcagggtcaggcccaggtgctgcag
gctgtatcaggaacaacggggcagacgggcggtaaggtcatccgtctgttgtctggcacc
acactcaagcctggtatgtccatactgcagggaggtacagttttaaatcaggctagccca
ggacaaacccaagtcaaggtgggtgctacaggggtgcagcgactgctgcagtctgccaac
gggcctgtcaaacaagtgttgctgacatccatgccccagcagacgcacggtcagtcagta
caggtgcagattccagcccaggcacagatgtcccaaggtcagactactgtccaggttcaa
cctcaggcccagatccagatccaaccccaggcccagatccagatccaagcccaagctgcc
caaatccaggtccaacctccaggccaggcagctcagacccaggtccagacacagggtcag
gtgcagctccagcctgccatgcagggccaggcacagggtggcgaagcaaagcgcatcacc
ctggttctccagcagccgtcgcaagccggttctgccacaccagggggtcaagctgtcact
gctcaacagcaagtcacaccaggaggtcaacagcagcaaacacagacccctgcaagacta
gtgctgggtcagctcccgagtggcaaactggtgctccagggaagccaactagcggcgctg
acccaggctcgggctgcaggtcaggccggagggcagcccaaagtcctcacaattcagctg
caagtacaacagcagcccaaccaacaaggtggagttaagtaccagctggtatcgggaact
ggcggcactggcggccctcaggtgttgcagatatcccagggccaaggaggacagagggtg
gctgtacctctcaaaatgcttctccagccgcagacaagttcagccacgtcttctggcggc
accgtctccgtggtgaaggtcatcaacccttcgacagcagccccctctgctacaaccacc
tctccatcgcaggccatccgcatcaccaaggctcccggcgagcctgcggctgtccgacgc
gtggagattctttgcaagcaggagaaggcgaatcgaatagtggctgaagccatagctcgg
gccaaagcacgtggcgagaagaacctacccagagtcctgaatcaggacgagcttccgact
acacaaacctcaccggagatgggaggggtcctgactgtagtgtctgccgctaagaaaaaa
agcagctgtggggggagcaaaaagaaaagtccagtatctggaggacccatacccaaaatt
attgtagggactgacaagaagggcaaagtgttgaagatatcaggaggaactattgcagta
agtggtggtccagttatacctggagctgggaacaaaagcaaaagcaaggttaaagcaaac
actataaccctggtaggagcaaagaaaagaaaaagaaacgcatcttcagatgtctctgat
ggggagctgagcccaccttcacctgtcgcgctggaggatgacatgattatgaagaggcgc
tccaaccgggtggtgaagaggaagaagtacacggaagacttggacattaaaataaccgat
gacgaggacgagcaggaagacgtagacgtaaccacgaccgcagcagctgtcgcctcgatt
agtggaggggccgcagctcagctgaaacaggaagttgagctcgatggcgacggactgccc
agcatgcagttctttgtggaaaatccgagtgaggaagatgccgccatcgtagacaaagtc
ttgtcaatgaggataatcaagaaggaggtgtctccaagccattatactactgctgaggag
ttctttgttaaatacaaaaactattcatacttgcattgtgagtgggccactttggagcag
ctggagaaagataagaggatccatcaaaagatcaagaggttcaagaccaagcacgcacag
atgaggcatttattccaggaggatgaggagccttttaacccagactacgtagaagttgac
cggatcctcgatgtgtcccacagtgtggacaaagacaacggcgagcccgtcatctactac
ttggtgaagtggtgctctctgccatatgaagacgctacctgggagctgaaagaggatgtc
gatgagggaaaagttgaagagttcggcaaaatccaaaacaggcagcctcgcctgaagaga
acggcccggcctgctgccagtgcatggaagaagttagaggagacccgagagtacaagaac
ggcaacacactaagagagtatcagctggaaggagtcaactggctgctatttaactggtac
aacaggcaaaactgcatcctggcagacgagatgggtctggggaagaccatccagtccatt
acgctgctgtcagaggtatacgctactggaatccaaggccccttcttggttattgctccc
ctatccaccatcaccaactgggagcgggagttctccacatggacccacatgaatgccatt
gtgtaccatggaagcctcgccagccgacaaatgatccagcaatatgagatgtactgcaaa
gatgacaagggacatttaatcccaggtgcgtacaagttcgacgccctcatcacaacgttt
gagatggttctctccgactgcccagagctgagggagatcgcctggcgctgcgtgatcatc
gatgaggcgcaccgtcttaaaaaccggaactgcaagctgttggacagcttgaagatgctg
gacctggagcacaaagtgctgttgaccggcactcctcttcagaacaccgtagaggaactt
tttagtcttcttcatttcctggagccagctcagtttccctctgaaattgaatttcttaga
gagtttggagacctcaaaacagaggaacaggtccagaaactccagtccattttaaaacct
atgatgttgcgcagactcaaagaagacgtggagaagaacttggcccccaagcaggagacc
attattgaggtggagttgactgatatccagaagaagtactaccgggccattctggagagg
aacttcagcttcctgagtttaggagccaacagtaacagcaacgtccccaacctgctcaac
acaatgatggagctccgaaagtgctgcaaccacccctacctcattaatggtgcggaagag
aagattgtggcagagttgcgagaaaagtatgaccccctggcccccgactttcatttgcag
gccctaattcggtccgctggcaaactggtgctacttgataaactgctgcctcgcctcaag
gctggtggccataaagtgctcatcttctctcagatggtgcgctgtttagacattctagag
gactacctcatcaacaagagatacctttatgagcgaattgatggaagagtgcgagggaac
ctgagacaggcagccatcgatcgcttcagcaagccagattccgatcgttttgtcttcctc
ctttgtacccgtgccggcggtctgggtattaacctgactgctgctgacacctgtgtcata
tttgactcggactggaatcctcaaaatgacctgcaggcccaagcaagatgtcatcgtatc
ggtcagtcaaaggcagtcaaggtctaccgtctcatcacaaggaattcctatgagagagag
atgctggacaaagcaagcctgaagcttggtttggaccgtgctgttctgcaaagcatgagt
ggcaacaaggacagcaacgtcaatgggctccagcagttctccaagaaggaaatcgaggac
ctcttgaggaaaggagcttatgccgccatcatggatgaaaacgatgaaggcagtcggttc
tgtgaggaagatattgaccagatccttcagcgacgagccactacaattactattgagagc
gaaggcaagggttctactttctccaaagccagcttcgtcgcatctgagaaccgcactgac
attgctctggatgaccctgagttctggcaaaagtgggccaagaaagccgatatcgacatg
gattcctttaatcaaaagaacactcttgtgattgacactcccagaattcggaaacagacc
cgtcagtactccagtttacgcggcgaaggaggagacctgtctgatttggacagtgacgac
gagtatccgcctgccaattccagacactcgcggtcttctcgccgctccgatcgccacagc
gggggaggctatggccgtaccgactgtttccgggtggagaaacacctgcttgtctatgga
tggggccgctggagggacatcttggcccatgccagatgtaagaggcgtctgagtgaacgt
gacgtagaaaccatctgccgtgtcatcctggtgttttgtctaatgcactatcgtggcgac
gagaacataaagagtttcatctgggagctcattactccaccagagaatggtcgtgaaccc
caaacactactaaaccactctggcctttctatcccggttccaagaggtaggaaaggtaag
agagtcaaggcccagagtacatttgatgttcagaaggtggagtggatccgcaagtacaac
cctgacactctgctgcttgatgatagctaccgcaaacacctgaagcaccagtgcaacaaa
gtgttgctcagggtccgcatgctctactacctaaaacaggaggtcattggtgaacatgca
gattctgtcctgaagggggctgatatcagggatgttgatatctggatgccagagatggaa
cagcaggaggtgcctgctgcttggtgggactctgatgcagaccgctcactgctcgctggt
gtcttcaaacatggttatgagatgtacactaccatgcgggcggatccctgcctctgcttc
gtagagagagttggtcggccagacgacaaggccattgatgctgagcagcacactggggat
gctgagctgggagatgacgctgactttgataagttctcagaggatccagagttcaagcca
gcatctagactctccaaagatctttttgatgagcctgactctatgaacgtggatgacgag
atttcagtggaagataagactataccagtggggacagaaagcgcaacgagtcagagtgga
gtgtgcgagtggccctccagctcatcgctaacggcacgattaaggcgactgatcaccgcg
tatcaacgcagctacagacaggaacagctgaagatcgaagctgaggccaaaggcgaccgc
aggcgcaggaggtgcgaacaagccagcaaactaaaggaaattgcacggcaggagcgacag
caaagatggacccggagagaagagagcgatttctaccgtgtggtatctacgtttggagtg
gagaagatcaagaaggagcctggtgtttccgaggagagagaggcggagttcgattggacc
cgtttccgaacgtttgcccgtctggataaaaaaaccgacgagagcctaagtcgatacttc
cgttcatttgtcgcgatgtgccggagggtgtgccacctccgcccaggtcgggaggattcg
tcagagctaactcagactgtggctcccatcacagaggaacgtgcctcccgtactctttac
cgcatcagccttctgcgacgccttcgtgagcgagtccttccccacccctccctggaggag
cacctcctcctggccccacgcagctctgagttgcccgcttggtggaccatgccagaccac
gatcggcagctaatgctcggcgctgcgttgcacggtgtaagccgcactgagctctccatc
ttctcagacccacaattcactttcagctcggcacgtgacgagttcatccagaatcagcag
gctctacctccaccgccaccccctccacccatcatgacatttagccagcccaagtctgag
ttggaactacctggagtgaaggtggagggaaccgatgagagtccccaactgtttggggga
gggatcagtactgcgctgcagagtacacccttgagtcacctcggcagcaaactgcaaggt
caggactggagcttcaaaagcagcagggaatcaacagaaaaaccaggaaggaaaggtgac
ggagggtctgattcagattcagattctgactcaggctcatcatcctcggagcgatcaggg
agcagcgatgaaagtggggacagtgacgaggaggtggaaggaggggctatgaaggttgga
aatgtggatgaagaaaatagtttactctccatgactccatctcagaatagcatacttcca
cctgaaccaatcagacttgactggcccaaggaccgtgtgctgatcaaccgcctggacaac
ctgtgtaacctcgtgctgaccggtcagtggccctcggggcggcgttacattcccgaagct
cagctccaccagagctcggagctggtgggagaggagatggcttacaccagggtcatccgt
aaacccagcagcacaccaggcggcatcggagctgagggagaagacggagagttcactgta
aaacttctcaaggaggagggcctgaagctgacgttctccaagcaggctctgatgcccaat
gggtcaggaggagagggcagcgggcgcaagaaacgcaaagaccaagagttatccgagcta
gacggaatccatgatccgctggagcgtactcctcgacgaagggaccctcccacgtggttg
aaagagaatccagattatgaggtggaaggagacatgttggagctgctggtgaacaggagc
aagaggaagaggaggcggcgagcaaataaacccctgacaggcactgagaaggtcaaggtc
attaacatgctgacaggaaagaaggttggagctgctttctgtccgatgctgcaggatctg
aaggagtatctggaggagaatcctaacattgctgttgcacctgactggtctgaaacagtt
caaaaatctggtttgttgcccgagtccctcttccaccggctgctgacggagaattcggag
attccgaagaaaagtcatcggcggcgtcaccaccaccatcaccaccaccatcaccatcat
taccacactcctgagcccacacctgaagacccaaacctggacggagtagaagaagagacc
ttggtttcggatggagcctatatgatggacgaggaggacttggagacgtcccaccacttc
ctcaccagcccagactttgacgttaaaatggagggtggcgacagcctctcccaaggtgac
tatgacagctcggatcaagaagcgctgctggatgacgtcatcatggcgcagaaggactct
gactcttcatcaagctcggaggactga
DBGET
integrated database retrieval system
