KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124870555
Entry
124870555         CDS       T08099                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120  Ubiquitin mediated proteolysis
gmu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124870555
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    124870555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmu04121]
    124870555
   03400 DNA repair and recombination proteins [BR:gmu03400]
    124870555
Ubiquitin system [BR:gmu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     124870555
DNA repair and recombination proteins [BR:gmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124870555
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 124870555
NCBI-ProteinID: XP_047225270
LinkDB
Position
6:21134091..21148280
AA seq 766 aa
MSNLKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLDGRSVYEEDFEGPFLDMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVNMLKNGKTEDLACMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDHFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLGRRLLSNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQYIQSISASLSGVDLTVRVLTTGYWPTQSATPKCTIPPAPREAYEVFRRFYLAK
HSGRQLTLQHHMGVADLNATFYGAIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKCTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtcgaacctcaaaggcggcaccaagaaggacaccaagatgaggatacgagcttttcct
atgacgatggatgagaaatatgtaaataacatctgggaccttctgaagaatgccatccag
gagattcagaggaagaacaacagtgggctgagctttgaagagctgtacagaaatgcctac
actatggtgctccacaagcacggagagaagctctacacaggcctgagggaggtggtcaca
gagcacctcatcaacaaagtaagggaagatgttctaaactccttaaataataattttctg
caaactctgaaccaggcctggaatgaccatcaaactgccatggttatgatcagagacatc
cttatgtacatggatagggtttatgttcagcaaaacaacgtggagaatgtatacaacctc
ggcctaatcatattcagggaccaggtggtgcgctacggctgcattcgggaccacctccga
cagacgttgctggacatgattgcacgggaaagaaagggggaagttgtagacaggggtgcc
atcagaaacgcctgccaaatgctgatgattctaggtctggacggtagatctgtgtatgag
gaggactttgaagggcccttcttagacatgtcagctgagttcttccagatggagagccaa
aagttcctggcagaaaacagtgccagtgtctacataaagaaggttgaggctagaatcaat
gaagagattgagcgagttatgcactgcttagataagtcaactgaagagccgattgttaag
gtagtggaaagggagcttatttcgaaacatatgaaaaccattgtggaaatggagaattct
ggcttggttaatatgctcaagaatgggaagacagaagacctggcttgcatgtacaagctg
ttcagtcgagtgccaaatggcctgaaaacaatgtgcgagtgtatgagctcctatttgagg
gaacaaggcaaagctctggtgtcagaggagggagagggcaagaaccctgttgactacatc
cagggtctgctagacttaaaaacacgatttgatcatttcctcctcgagtctttcaacaat
gacagactctttaaacaaaccattgctggtgactttgagtatttcctcaacctcaactcg
cgctcgccggagtacctgtcactgtttatagatgataagctcaagaagggagtaaaaggg
ctgacagaacaggaggtggagtctattctcgacaaggccatggtgctgttcaggtttatg
caggagaaggacgttttcgaaagatactacaagcagcatctgggtcgtcggcttctcagc
aacaagagcgtctcagatgattcagagaaaaacatgatctctaagctgaagacagaatgt
ggctgtcagttcacctccaaactggaagggatgttcagagacatgagcatctcaaacact
actatggatgagttcaggcaatacatacagagcatatcggcttctttaagtggtgtagac
ctaacagtaagggtcctcaccactggttactggcctacgcagtctgcaacacctaagtgc
accatcccccctgctcctagagaagcatatgaagtcttcagaaggttttaccttgctaag
cacagtggaaggcagctcacactacagcaccatatgggggtagcagacctaaacgcaact
ttctatggagctattaaaaaggaggatggttcagaggtgggtgtcggcggagcacaggta
accggttctaacacccgtaagcacatcttgcaggtctccaccttccagatgaccatcctc
atgctcttcaataacagggaaaagtgcactttcgaggagattcagcaagagacagatatc
cccgagagagagttggtgcgggcgctgcagtctttagcctgtggaaaacctacacagagg
gttctaacaaaagagccaaagtcaaaagagatcgaaaatggccatgtgtttacagtcaac
gatcagtttacctccaaactgcacagagtcaaaatccagacagttgctgctaaacaaggg
gaatcagatcctgaaagaaaggagacgcgacagaaagtcgatgatgacaggaagcatgag
atcgaggcagccatcgtccgcatcatgaagtcgaggaagaagatgcagcacaatgtccta
gtagcagaggtgacccagcagctccgagcacggtttcttcccagtcctgtggtaatcaaa
aagcgcattgaaggactgatagaaagagaataccttgcacggacgccggaggatcgtaaa
gtgtacacctatgtggcgtag

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