Girardinichthys multiradiatus (darkedged splitfin): 124871004
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Entry
124871004 CDS
T08099
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124871004 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124871004 (xrcc5)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
124871004 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF4599
Motif
Other DBs
NCBI-GeneID:
124871004
NCBI-ProteinID:
XP_047225878
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All DBs
Position
7:complement(30885671..30898855)
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AA seq
725 aa
AA seq
DB search
MAGGKSALVLCMDVGFSMSNSAPGEEPPFALAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNPLDQDGQYQNITVHRHLTVPDFDLLEEIEHQIHPENQQADWLDALVVCMDLLQTET
QGKKCDRLNIVFLTDLSTEASSDNLDVIIENVKKAGITLQFFLPFPLEDKEEGDGERTGS
GDPGRGKGLSREQRSGLEMVKHIMLSLDEEDGLDEIYTFRNAVEQLCMFKRIERRPMTWP
CQLTIGSSLSIRIVGYKAVTEEKLKKMWITVDAQTNKKDDVKRETVYCLDDDNETEVQKE
DIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKKNLVLRHQFMGTQVVKIFCAR
DDEHAGVAMSALIRGLDELNMVAIVRYTYDRRSNPQVGAAFPCIKPEYECLLYIQLPFME
DLYGRQHMFPSLENNKKIAPSETQLSVVDSLIDSMMLVADDENEELRDLFKPHHLPNPAF
QRHFQCLHHRAVHPDSPLPPMESWLEAALDRPEVIKERCQAPLEEIKKLFPLTEVEKKKK
LKTSAQIFGKDSEEPDAKKAKEDEAEEEFNLADIAEGSVTSVGSVNPARDFRALIKQKTL
PFGEVCQQLTHRIEQLLSNKNMQYYMKSITCIQAFREQSVKQGNADLFNSYLQSLKRSIP
SRALEVFWDLLVQDAVTLISKDEVEGSAVSKNEASQFLLAEERKEQPAPELVEDTGDVDD
LLDMM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaggaaaatcagccttggttctctgcatggatgtgggcttctccatgtccaac
tctgccccaggtgaagaacctccctttgcactggccaaaaaggtcatccagaagtttgtc
cagcgccaggtttttgcagagactaaggatgaactggctttggttctgtttggcacggat
tctaccaaaaaccctcttgaccaggatgggcaataccagaacatcacagtgcatcgtcat
cttacggtgccagactttgacctgctggaggagattgaacatcagatccaccctgagaat
cagcaggctgactggctggatgctcttgtagtctgcatggatcttcttcagacagaaacc
caagggaagaaatgcgatcgcctcaatatcgtcttcctgactgacctgagcactgaagcc
agttcagacaatctggatgttattattgagaacgtgaaaaaagctggaatcaccctgcag
ttctttttgccttttccattggaggataaagaagagggtgatggagaaagaacaggttct
ggtgaccccggtaggggcaaaggcctctctagggaacagcgtagtggcctggaaatggtt
aaacacatcatgctgagtctggatgaggaggatggtctggatgaaatttacacattcagg
aatgctgtggagcagctgtgcatgtttaaacgcattgagaggagacccatgacctggccc
tgtcagctcaccatcggcagctctctgtccatccgtattgttggctacaaagcagtgact
gaggagaaactgaagaaaatgtggatcacagtcgacgctcaaaccaacaagaaagatgac
gtgaagagagagactgtttactgcctggacgacgacaacgagacagaggtgcagaaggaa
gacattattcaaggtttccgttacggaagtgacattgttcctttctccaaagtggatcag
gaccagatgaaatacaagcatgacgggaagtgctttgctgttctgggattcactaaaaag
aacctggttcttcgccaccagtttatgggaacacaggttgtcaagatattttgtgcgcga
gatgatgagcatgcaggcgtcgccatgtcggctctgatccgtggtctggatgaactcaac
atggttgccatcgtgcggtacacctacgaccggcgcagcaatcctcaagtgggagctgcg
ttcccgtgtatcaagccggagtatgagtgcctgttatacatccagttgcccttcatggaa
gatctttatggaagacagcacatgtttccttctcttgaaaacaataagaagatcgctcca
tcagagacgcagctgtcagtcgtagactctctcatagactctatgatgcttgtagcagac
gatgaaaatgaagaactaagggatctgttcaagccccaccatcttcccaaccctgctttc
cagagacacttccagtgtctgcaccacagggctgtacaccctgactctcctcttcccccc
atggagtcgtggctggaggctgctctcgaccgccctgaggtcattaaggagcgctgccaa
gctccactggaggagataaagaagctgtttccgctcaccgaagtagagaagaaaaagaag
ctgaagacaagtgctcagatttttggcaaagactctgaggaaccagatgccaagaaagca
aaagaagacgaagcagaggaagagttcaacctggcagacatcgctgaaggatctgttact
tctgtgggaagcgttaatccggcccgggatttccgtgctctgatcaaacagaaaactctt
ccgttcggagaagtctgtcagcagctgactcacaggatagagcagctgcttagcaacaag
aacatgcaatactacatgaaaagcatcacctgtatccaggctttcagagagcagtctgtt
aagcaggggaatgctgatctgttcaacagttacctccaatccctgaaaaggagtattccc
agcagagccctcgaggttttctgggacctgcttgttcaagacgctgtgactttgatcagc
aaggacgaggtggaaggaagcgctgtgtcgaaaaatgaagccagtcagtttctgttggct
gaggagaggaaagagcaaccagctcctgaactggtggaagatactggagatgttgatgac
ttgctggacatgatgtaa
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