Girardinichthys multiradiatus (darkedged splitfin): 124871068
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Entry
124871068 CDS
T08099
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmu03037
]
124871068 (ift88)
Cilium and associated proteins [BR:
gmu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124871068 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
TPR_19
TPR_14
TPR_6
TPR_7
TPR_16
TPR_11
TPR_9
ANAPC3
SNAP
TPR_17
TPR_CcmH_CycH
ARM_TT21_5th
TPR_10
TPR-S
ARM_TT21_C
DUF2225
ARM_TT21_4th
MIT
TPR_15
TPR_MalT
ARM_TT21_N
HEAT_Nup120
HAT_PRP39_C
ARM_TT21_2nd
Consortin_N
SHPRH_helical-1st
NatA_aux_su
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
124871068
NCBI-ProteinID:
XP_047225995
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All DBs
Position
7:complement(12746250..12777636)
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AA seq
893 aa
AA seq
DB search
MENVHLAVEDDDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTAIGG
RPLASSFGSRIPMASSMGRPMTGAVQDGAARPMTAVRAAGYSSLMTRGSTFDPLGQSRGP
APPLEAKNDDTVEEKIKILEKKVNDLIEESCMAQSIDALQLALEKAKEAGRKERALIRQR
EQSGNTEHINLDLTYSGEIVEQGTDLASRAESFMTQQCRQRKAVLLNLANQYANNEMYPE
ALNSYQVIVKNKMFSNAGRLKVNMANIYFKQKNYPKAIKFYRMALDQISNAHKEMRIKIM
QNIGVVFVRLGQYSDAITSFEHIMSDSPNIKTGFNLILCYYAIGDRERMKKAFQKLISVP
LGIDDEDKYIPTSDDPSSNMVIEAIKNDKLHQMERNLKVLAEKYIMTAAKLIAPAIETSF
ASGFDWCVDMVKSSQYVELANDLEINKAITYLRQKDFNQVEAVETLKTFEKKDSRVKSVA
ATNLSFLYFLEKDYDQADRYADLAMNADRYNPAALINKGNTVFVKKDYEKAAEFYKEALR
NDSSCTEALYNLGLTYKTLNRLEEALDCFLKLHAILRNSAQVMYQLAYLYEPLGDPQQAI
EWLMQVISVTPTDPHVLAKLGKLHDDEGDKSQAFQYYSESFRYFPSNIDVIEWLGAYYIE
TQFCEKAIQYFERATLIQPTQVKWQLIVASCYRRSGNYQKALETYKEIHRRFPENVECLR
FLVRLSTDMGLKEVQEYATKLKKVEKMKEIREQRIKSGRENSGRGRREGREGSTGSAAVI
STSALTSSKKSSITDIVKAESQPEPKQFSPLLDPERDSGRSSSSSSKGERLSAKMKSLPG
SNEPYENSSPKELDASYVDPLGPQIERPKTGAKKLVDDDDFADEDLGDDLLPE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtgcacctggccgtagaggatgatgacctttattcgggttacaacgactat
aaccccacatttgactccgaggagttggagaacgatgtgggcttccagcaggcagtgagg
accagtcatggaaggagacccccgatgacggcaaagtttccaggcactgccattggaggt
cgacctttagcatcatccttcggttcccgcatccccatggcttcatcaatgggcagaccc
atgactggagctgtgcaggatggtgctgctcgcccgatgactgctgtcagagctgcgggg
tactcgtccttaatgacccgaggctcaacctttgaccctctgggccagtccagggggcct
gcgcctccactggaagcaaagaatgacgacacggtggaagagaagatcaagatcttggag
aagaaagtgaatgacctgatagaggagagctgcatggcgcagagcattgacgccttacag
ctggctcttgaaaaagccaaagaggcagggaggaaggaacgagcgctgatccgacagagg
gaacagtctggcaacacagaacacatcaacttagacctcacttactctggggagatagta
gaacagggaacagatttggcttccagagcagaaagctttatgactcagcaatgcaggcag
agaaaagctgttctgctcaaccttgctaaccagtatgcaaacaacgaaatgtacccggag
gctttgaacagctaccaggtcattgtgaaaaacaagatgttcagtaacgcaggccgcctc
aaagtcaacatggccaacatctacttcaaacagaagaactaccctaaagctatcaagttc
taccgcatggcgctggatcagatctccaacgctcataaggaaatgaggatcaagatcatg
cagaatatcggagtagtgtttgtccgcttgggccagtactcagacgccataacgtccttc
gagcacatcatgagtgacagtcccaacataaagactggcttcaaccttatcctgtgctac
tatgccattggagacagagagaggatgaagaaggcctttcagaagctcatctctgttcca
ctgggtattgatgatgaagataagtacatccctacaagtgatgatcccagttcaaatatg
gtcattgaggccattaaaaatgacaagcttcaccagatggaaaggaatctgaaagtcctg
gctgagaaatacatcatgactgcagccaagctcattgctccagccatcgagacttccttt
gctagcggatttgactggtgtgttgacatggtgaagagctctcagtatgttgagcttgcc
aacgatctggagatcaacaaagccatcacatacctcagacagaaggactttaaccaggtc
gaggcagtggaaacactgaaaacatttgagaagaaggacagcagagtgaaaagtgttgca
gccactaacctttcttttctctatttcttggagaaggattatgaccaggctgaccgatac
gctgacctcgcaatgaacgctgatcgttacaatcccgcagcccttatcaacaagggcaac
acagtgtttgtcaaaaaggactatgaaaaagctgccgagttctacaaagaggccctgagg
aatgactcctcatgcactgaggccctctacaacctgggtttgacgtataaaacactgaac
agactggaagaggccctagactgcttcctgaagcttcatgccattctgaggaacagcgcg
caggtcatgtatcagctggcttacctctacgagccgctaggagatcctcaacaggcaatc
gagtggctgatgcaggtcatcagtgtcactcccacggatccacacgtactggccaaactg
ggaaagctgcatgatgacgagggggacaagtcccaagctttccagtactatagtgagtct
ttcaggtactttccctccaacattgatgtgatcgaatggctcggggcttactatattgag
acccagttctgtgagaaggctatccagtactttgaacgagcaactctcatacagccgacc
caggtgaagtggcagctaatagtcgcaagctgttatagaagaagtggaaactatcagaaa
gctctggaaacctataaagagatccatcggaggtttccagaaaacgtggaatgcttgcgc
ttcctggttaggctctcaacagacatggggctgaaggaagtccaggaatatgccaccaag
ctgaagaaggtagagaagatgaaggagatcagagagcagaggataaagtcgggccgggag
aacagtgggagaggtcgcagagaaggcagggagggcagcacagggagtgctgcagtcatc
tccacatctgccctcacctcttctaagaagtccagcattactgatattgtcaaagcagaa
tctcaacctgagcccaaacagttcagtccactgctggacccagagcgagacagcggccgc
agcagcagcagcagctctaaaggagagcgtctcagcgccaagatgaagtcacttcctggt
tcaaatgagccctatgaaaacagcagcccaaaagaacttgatgcctcatatgtggacccg
ctggggcctcagattgaaagaccaaagacgggggccaagaagctggtggatgatgatgac
tttgcagatgaagacctgggagatgatctactaccagaatag
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