Girardinichthys multiradiatus (darkedged splitfin): 124871102
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Entry
124871102 CDS
T08099
Symbol
si:ch211-214p13.3
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03266
Virion - Herpesvirus
gmu04514
Cell adhesion molecules
gmu04520
Adherens junction
gmu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
124871102 (si:ch211-214p13.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124871102 (si:ch211-214p13.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124871102 (si:ch211-214p13.3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124871102 (si:ch211-214p13.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124871102 (si:ch211-214p13.3)
04090 CD molecules [BR:
gmu04090
]
124871102 (si:ch211-214p13.3)
Cell adhesion molecules [BR:
gmu04515
]
Immunoglobulin superfamily
Nectin family
124871102 (si:ch211-214p13.3)
CD molecules [BR:
gmu04090
]
Proteins
124871102 (si:ch211-214p13.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
I-set
V-set
Ig_2
ig
V-set_CD47
Ig_4
Motif
Other DBs
NCBI-GeneID:
124871102
NCBI-ProteinID:
XP_047226060
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All DBs
Position
7:23212097..23273138
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AA seq
424 aa
AA seq
DB search
MSYKLVLFVFALVRTRDVQDVAGQSATADLRGTAILPCKLTRKLTTDEVLEQISWQRKTK
GKPQTDNFLTITKEKDNFVNGHDKRFQRIGTFADNNGTLRLSDVNLQDDGTYSCIFSIFP
TGTVRMDIPLHVLVTPKTSIDDALPRLGEAEVPLATCTSAGSKPPAKVAWDTGALKDKVR
ATNNSTLHDNGTTTTVSTLMGKPTKEIYRRRLQCVISTEKLNTTISFEIQIYFCCRWEGC
GISCRLYMNASGTNQRDIKTGEKKADPPLEVNITEGPMKDQVTCEADANPKADITWHRSD
NPLLPSVTAEGATLTFKSKTSDLTTGSYQCKAINRYGSKESTLYVQHRGSCKDGWIAFSL
LLAIVAIMAIVAAVALYKHGVLKLPRLLVFEREQVPTSSPAELAGEDVPDHREGGTSRQQ
NAEV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaagctggtactgtttgtctttgcactcgtccggaccagagatgtgcaagat
gttgcaggtcagagtgccaccgcggacctcagaggtaccgccatcttaccctgcaagcta
acacggaaactaacaacagacgaggtccttgaacagatttcctggcagagaaagacgaaa
ggaaaaccgcagacggacaatttcttgaccatcacgaaagagaaagataattttgttaac
ggacacgataagagatttcagcgtattgggacatttgctgacaacaatgggactctccgg
ctctctgacgtaaacctgcaggatgatggaacctactcttgcatcttttccatttttcct
accggaactgtcaggatggatatacctctacatgttcttgtaactccaaaaacaagcata
gacgatgccctacccagacttggagaagcagaggttcctcttgcgacctgcacctctgct
ggctccaagccgcctgccaaggtggcttgggacaccggtgctctcaaagacaaagtgaga
gcgacaaacaactcaactttacatgacaacggcacaaccaccacagtcagcacgctgatg
ggaaagcccaccaaagaaatctacagacgtcggctccagtgtgtcatctccaccgagaaa
ctaaacacaaccatatccttcgaaatacagatctacttctgttgtagatgggaaggctgt
ggtatttcctgcagactttatatgaatgcatcagggaccaaccagagggacataaaaaca
ggagaaaaaaaggcagatccacctctggaggtgaacattacagaaggaccaatgaaggac
caggttacatgtgaggctgatgcaaacccaaaggcagacattacctggcacaggtcagac
aaccctctgcttccatccgtcacagcagagggggcaacgctgacgtttaaaagcaagacc
tctgatctgacaactggctcctaccagtgtaaggcgattaacagatatggaagcaaggaa
agcacactctatgttcaacaccgaggaagctgcaaagatggttggatcgctttttctctt
cttctggccattgtggctattatggccattgttgctgcggtcgctctgtacaaacatgga
gttctgaaactcccgagacttttagtgtttgaaagagaacaggtaccaacatcttcacca
gcagaacttgctggtgaagatgtgccagaccatagggaaggagggacatcaaggcaacaa
aacgctgaagtatag
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