Girardinichthys multiradiatus (darkedged splitfin): 124871132
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Entry
124871132 CDS
T08099
Symbol
ddx3xa
Name
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124871132 (ddx3xa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124871132 (ddx3xa)
03041 Spliceosome [BR:
gmu03041
]
124871132 (ddx3xa)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124871132 (ddx3xa)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124871132 (ddx3xa)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124871132 (ddx3xa)
mRNA cycle factors
Common to processing body (P body) and stress granule
124871132 (ddx3xa)
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124871132 (ddx3xa)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124871132 (ddx3xa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
124871132
NCBI-ProteinID:
XP_047226113
LinkDB
All DBs
Position
7:complement(8095372..8110325)
Genome browser
AA seq
774 aa
AA seq
DB search
MSHVVIDNPHGLDQQLAALDLNSEGQGGGTGRRYIPPHLRNKDAAKNAGNSYSAGKQCGY
SVAPVNFYAPKQCAQPWQAQCQQTQGNSCSSGWDDCTMGYPRLASQELAFYHAYSGGWRN
RCDSPGWDEGRTNGFVNGFHDNRTNGGFGGRGPPRNDRGGRGAYRGNRGGGSFNQPLQST
AGFGGYENKDGGWGGAPRDAAYNSFGGRNDRSKSAFNDRGAGSRGRYERGGFAGGGNSRW
VEDSREDDWSKPTAPNERLENELFAGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVDM
GEIIMGNINLTRYTRPTPVQKHAIPIIKIRRDLMACAQTGSGKTAAFLLPVLSQIYTDGP
GDALQASKNSGQENGRYSRRKQYPISLVLAPTRELALQIYDEARKFAYRSHVRPCVVYGG
ADIGQQIRELERGCHLLVATPGRLVDMMERGKIGLDHCNYLVLDEADRMLDMGFEPQIRR
IVEQDTMPPKGMRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVE
ENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEA
LHHFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATS
FFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQHKSTNRGRSKRSSGCFGARDYRQT
SGGSGGFNSNRSGRGAGGHGGNRGFGGGGFGGNFYSDGYGGNYNHSGSVDWWGN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcattgataatccacacggtctagatcagcagcttgctgccctagac
ttgaactctgaaggtcaaggcggaggaactggcagacgctacattccacctcacttgagg
aacaaagatgcagccaaaaacgcaggaaattcttattccgctggtaaacagtgcggttat
tcagtggcaccagtaaatttctatgcccctaagcagtgcgcccaaccatggcaagctcaa
tgtcagcaaacacagggaaatagctgttcttctggatgggatgactgtacgatgggttac
ccaagactggcctctcaagagcttgccttttaccatgcctacagtggtggttggcgaaac
agatgcgattcacctggatgggatgaaggacgcaccaatggatttgtgaatggtttccat
gacaaccgtacaaatgggggtttcggaggacgtggaccccctcgcaatgacagaggtggg
cgtggcgcctaccgtggtaacaggggcggaggctcgtttaatcaaccattgcaaagtaca
gcagggtttggaggctatgaaaacaaagatggaggctggggaggagctcctagagatgct
gcctacaacagctttggagggcgtaatgatcggtcaaagtctgccttcaatgaccgtggg
gcaggctccaggggaagatacgagcgcggaggatttgctggtggaggaaatagccgctgg
gtggaggactccagagaagatgactggtccaagcccaccgcacccaatgagcgtctggaa
aatgagctttttgctggaagcaacactgggataaacttcgagaaatacgacgatattcct
gtggaggcgactggaagcaactgcccaccacacattgagagtttccatgatgtggacatg
ggggagatcatcatggggaacatcaacctgactcgttacactcggcccactccagtccag
aagcacgccattcctatcattaagatcaggagagaccttatggcctgtgcccagactggt
tctggtaagactgctgccttcctgttgccagttctgagtcagatctacacagatgggcca
ggagacgctctccaggcctcaaagaacagtggacaggagaacgggaggtacagccgacgt
aagcagtacccaatctcccttgttttggctccaaccagagaactggctttgcagatctat
gatgaagcaaggaagtttgcctaccgctcccatgtgcgtccctgcgtggtatacggtggc
gcagacattggccaacagatcagggaactggaaagaggctgtcatctactggtggccaca
ccaggacgtttggttgacatgatggagaggggcaagatcggcctggaccattgcaactac
ttggtcctggatgaggctgatcgcatgttggacatgggatttgagccgcagatcaggcgc
attgtggagcaagacacaatgccaccaaagggcatgcgccagaccatgatgttcagtgcc
accttccccaaagagattcagatccttgctcgtgacttcctggaggactacattttcctg
gcagtgggtcgtgtcggttccacttcagagaacatcacacagaaggtggtctgggtagaa
gagaatgacaaaagatcttttcttcttgacctgctcaatgccacaggtaaagactccctg
actctggtgtttgtggaaacaaagaaaggagctgacgctctggaggacttcctgtaccgg
gagggttacgcctgcaccagcattcatggagatcgatctcagagggacagagaagaagct
ctgcatcatttccgatctggacgctgcccaatcctggtggctacagctgtggctgctcga
ggtctggacatcagcaatgtaaagcatgtgatcaacttcgatctgcccagtgacattgag
gagtacgttcaccgtatcggccgtacgggacgtgtgggcaaccttggtctggccacgtcg
ttctttaacgacaaaaacagcaacataaccaaagatttgctggacatcctggttgaggcc
aagcaggaggttccctcctggcttgagagcctggcctatgaacaccagcacaagagcacc
aaccgtggacgctctaagaggtcctcaggttgttttggagctagagattaccgccagaca
tcaggtggctctgggggctttaacagcaaccgttcagggcgcggcgctggaggtcatgga
ggaaaccgtggctttggtggaggtggctttggtggcaacttctacagcgacggctacgga
ggaaattacaaccactctggtagtgtagattggtgggggaactag
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