Girardinichthys multiradiatus (darkedged splitfin): 124871154
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Entry
124871154 CDS
T08099
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124871154 (pms1)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124871154 (pms1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124871154
NCBI-ProteinID:
XP_047226173
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All DBs
Position
7:complement(48011866..48031614)
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AA seq
921 aa
AA seq
DB search
MKHGTSQGIMKQLPPDTVRLLSSSQVITSVVNVVKELMENSLDAGASSIDIKLENFGLDR
TEVRDNGCGIKAVDAPVMAVRHFTSKICSHEDLGHLETYGFRGEALGSICAVAEVAVTTK
TEEDDISTLYTLDFTGNIVSQRPSHLGQGTSVNVMKLFKNLPVRRQYYSSTKKCKEELKK
VQDLLMAYAIIKPELRLMLVHNKVVVWQKPRVADNRSALVATLGPSAVTNLLSCHQEQPE
MVLDSFLPKPGADLLSTSSSTPDKTFIFINNRPVQQKEILKLLRQHYSAQYSDDAARHRY
PVLMLKITVSPSSVDVNLTPDKTQVLLDNKEAVLTAVEALLVSLYGFRPGPSQPAEKQLN
LETLPPLSNCLENDASPLENKESRKIGVASHDEGFHTEEPKHGDTGQSAANSDASLQRQA
SNCSSSSSMADDWIVNQIPAELQSDLSLCDDEMTRSRSQITQTSSASISPEKPGDCDVPA
AETRKMQISAEDWSRGTALTDPTSGEPLQPVVILRPLKLGHPSPEEDMSKKPINAITEKR
AVLTAYNMISNRAMRAPLSPASLFEKEARSEVLREQPAASLQEISTAVQERWKNLREEDR
KKYEEKAKKNQDLHDQRTKLASDEGPKDPTEKTPRSKIQGQKRKVPLSNQQLLDELFSAQ
PQKKMKTPASKPSQPLPCSMAALRRQLQRLSSQNDTGPRGLHLVNRLASQSSWVLLCGQR
LMLLNPFRVQEALLFRRLEESNILPAVSLQNPVLLTDGNLGGPEYVDTLCSMKKQAAELD
GSIFFSDPRLVASGFKIKLTPGLMSAKRHLEVTAMADCVPFLGVEDLREVLTAVLHRKAS
KVQECRPLKVTNYLKAEAVRLARQLPSNLCHRDVEELVQRMERQLGGTNRTCIHGRPFFQ
HLTDIPSTDREAKALFRPLEL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacggtaccagccaaggaatcatgaagcagcttcctccagacacggtgcggctg
ctgtccagctcccaggtcatcacttctgtggtgaatgttgtgaaagaactgatggagaat
tccctggatgctggagcctcaagcatcgacataaaactggagaattttggcctggatcgg
acagaagttcgtgacaacggttgtgggatcaaagctgtggatgctccagtgatggccgtc
cgacatttcacctccaagatctgcagccacgaagacctggggcatctggaaacatacggc
ttcaggggggaggcgctgggctccatctgtgctgtggctgaggtagctgttaccacaaaa
acggaggaagacgacatcagcaccctgtacacactggacttcactggaaacatcgtttct
cagaggccgtcccacctgggtcaaggtacgtccgtgaatgtgatgaagctttttaagaat
ctcccagtgagacggcagtactattcttctacaaagaagtgtaaggaggagctgaagaag
gttcaggacctgttgatggcctatgccattataaaaccagagctcagactgatgctagtg
cataataaggtggtggtctggcagaagcccagagtggctgacaacaggagcgccctcgtt
gctacgcttgggcccagcgctgtcactaacctgctgtcgtgccaccaagaacaaccggag
atggttctggacagctttcttcccaagcctggagctgatctcctctccacaagctcctcc
actccagataaaaccttcatattcattaataaccggcctgtccagcaaaaagaaattctg
aagctgctgcgtcagcactactctgctcagtattctgatgatgcggctcggcatcgctac
cctgtcctcatgcttaaaattactgtctccccttcatcagtggatgtaaatctgacacct
gacaaaacccaagtcctgcttgataacaaggaggcggtgttgactgcggtcgaggctctg
ctggtttctctttatggttttcggccgggtccaagccaaccagctgaaaaacagctgaac
cttgagactcttcctcctctatctaattgtttggagaatgacgcttcacccctggaaaat
aaggaaagcaggaaaattggtgtcgccagccatgatgaaggcttccacacagaagaaccg
aaacacggtgacacaggtcagtcagcagcaaactctgatgcttccctgcagcgccaggcc
tccaactgtagctcctcatcctctatggcagacgactggattgtcaaccagattcccgcc
gagcttcagtccgacctctctctttgcgatgatgaaatgactcggagtcgctcccaaata
acacaaactagttctgcaagcatatctccagagaaacccggggactgtgatgttccagct
gcagaaacaagaaagatgcaaatatcggccgaggactggagtcgaggtacagctctgact
gacccgacgtcaggagaacctctgcagcccgtcgtaatcctccgacccttaaagctcggt
catcccagcccggaggaggacatgagtaaaaagccaatcaacgctataacagagaaacga
gctgttctgacggcctacaacatgatcagcaaccgcgctatgagggcaccactgtctccc
gcctccctgttcgagaaggaggcccgatcggaggtcctgagggagcagcctgcggccagc
ctgcaggagatcagcaccgctgttcaggagaggtggaaaaatctgagggaggaagacaga
aagaagtatgaggaaaaggcaaagaaaaaccaggatctccatgaccagaggaccaagttg
gcctcagacgagggccccaaagacccaacagaaaagaccccgaggtccaaaatccagggt
cagaaacgtaaagtgccactgtccaaccagcagctactggatgaactcttctctgctcag
ccccagaagaagatgaagactccagcctctaagccttcgcagcccctcccctgcagcatg
gcggccctccgccggcagcttcagcgcctctcatcccagaacgacacagggccccggggc
ctccatcttgtaaaccgactggcttctcagagctcctgggtccttctgtgtggtcagagg
ctgatgttgttaaacccgtttcgagtgcaggaagccttgttgtttaggaggcttgaggag
agtaatattcttccagcagtgagtctgcagaacccggttctgttaacagatgggaatctg
ggaggacctgagtacgttgacacgttgtgcagcatgaagaaacaagcagcagagctggat
ggaagtatcttcttctctgaccccagacttgttgccagcggctttaaaatcaaactcaca
ccaggtctcatgtcagcaaagagacatctggaagtgacggccatggcggactgcgtgccg
ttcctcggcgtggaggacctcagggaggttctgactgcagttcttcacaggaaggcctcc
aaagtgcaagagtgccgtccacttaaagtcacaaactacctaaaagctgaggcagtccga
ctggcccgccagctgccttcaaatttatgtcacagagatgtggaggaacttgttcaacgg
atggaacggcagctgggtggaaccaaccggacctgcatccacggacggccgtttttccaa
cacctgaccgacatcccctctacagacagggaagcgaaggctctgttcaggcctttggag
ctttga
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