Girardinichthys multiradiatus (darkedged splitfin): 124871223
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Entry
124871223 CDS
T08099
Symbol
itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04145
Phagosome
gmu04148
Efferocytosis
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04810
Regulation of actin cytoskeleton
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124871223 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124871223 (itgb5)
04148 Efferocytosis
124871223 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124871223 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124871223 (itgb5)
04810 Regulation of actin cytoskeleton
124871223 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124871223 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124871223 (itgb5)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124871223 (itgb5)
Cell adhesion molecules [BR:
gmu04515
]
Integrins
Integrin beta subunits
124871223 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
124871223
NCBI-ProteinID:
XP_047226309
LinkDB
All DBs
Position
7:4917086..4992204
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AA seq
797 aa
AA seq
DB search
MWSPGRAALCWMLLETFLRSAGGLNICMSGSATSCEECLLIHPSCAWCAQEDFGKHRSLT
SRCDFKENLQKRGCEPRFIEYPRSTTSVLKNLPLSTKGSGPAQYDVVQIMPQKISLSLRP
GDQTWFSLQVREVEDYPVDLYYLMDLSLSMKDDLDTMLNLGTKLAEEMGKLTSNFRLGFG
SFVDKNMSPFSYTAPKYLENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQKQMVS
RNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVRPHDGRC
HLNDQNEYSASTKMDYPSLALLGEKLAENNIVLIFAVTKRLYVIYKNFTALLPGTTVEIL
DQDSKNVIQLIITAYNNIRSKVELTVSDHPEDISLSFTATCQDGKPLPGFRKCEDLKIGD
TVSFHVSAEARSCPPRGTDQTFTIKPVGFKDRLEVAVDYQCDCVCSQMAQINSSICSSIG
TYNCGTCHCEPGYLGAHCECQEGEASSMYLSACREGEGKQICSGRGECSCNQCLCYESEF
GKIYGSFCECDDFSCARHKGILCSGHGECHCGLCKCHAGYVGDNCNCSTETSFCFSDDGK
MCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQTCQR
LCKDKIITVEILKKEEPGAVLCLYKTENDCVMKFTYSEHASGRSILTALKEPECSSGPNA
LTVLLAVVGTILLVGVVLLATWKLVITIHDRREFARFQSARIRARYHMASNPLYKNSVST
HSAEMETFEKSYNGGLH
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccggggagagcagctctgtgctggatgctgctggagacgtttctgcgctct
gctggaggtctcaacatatgcatgagtggcagcgctacgtcctgtgaggaatgcctcctg
atacaccccagctgtgcctggtgcgcacaagaggactttgggaagcaccgttctctgaca
tcacgatgcgatttcaaggaaaacttgcaaaagaggggctgtgagccacgctttatcgaa
tacccgagaagcacgacctccgtcttgaagaacttacccctgagcactaaaggatcagga
ccagcacagtacgacgtcgtccagattatgcctcagaagatctctctcagcctgcggcca
ggagaccagacgtggttcagcctgcaggtgcgggaggtggaagattacccagtggatctc
tactacctgatggacctctcactctccatgaaagacgacctggacacaatgcttaacctt
ggtaccaagctggcagaggaaatggggaagctcaccagcaacttccgtctgggctttggg
tcctttgtggataaaaacatgtcacccttctcctacactgcacccaagtacctggagaat
ccctgcaacggatacaagctcttccctaattgtgtccctacgtttggttttcgccacatc
ctctctctgacggataaagtggaccgtttcaatgaggaggtgcagaaacagatggtgtct
cggaaccgagacgctccggagggcgggtttgacgccatcctgcaggccgctgtctgcaag
gaggaaatcggctggaggaaggaggcctaccacctgctggtgtttgccacagacgacgtg
ccgcacctcgcattggatggccggctgggagggctcgtccggcctcacgacggtcgctgt
cacctcaatgatcagaacgagtatagcgcctccacaaagatggactatccgtctctcgct
ctgcttggagagaaactggcagaaaataacatcgtcctcatctttgccgtaaccaaacgg
ctctacgttatttataagaatttcacagctctcctccctggaacgacagttgaaatcttg
gaccaggactccaagaatgtcattcagctgattataactgcttacaataacatacgctcc
aaagtggagctgacggtgtcggatcatcccgaggacatcagcctgtccttcactgccacc
tgccaggatggaaagccgctgccaggcttccggaagtgtgaagacttgaagataggagac
actgtgtccttccacgtgagcgcagaggcaaggagctgtccaccccgtggcaccgaccag
accttcacaataaagccggtggggtttaaggaccgcctggaggtggctgtggattatcag
tgtgactgtgtctgcagccaaatggcacagatcaacagcagcatctgcagctccatcggc
acgtacaactgcggcacctgtcattgcgagcctggctacctgggcgcccactgtgaatgc
caggagggcgaggccagcagcatgtacctcagtgcctgcagggaaggcgagggcaagcag
atctgcagtggaagaggcgagtgcagctgcaaccagtgtctctgctacgagtcggagttt
gggaagatctatggcagcttctgcgagtgcgatgacttctcctgcgcgaggcataaaggc
atcctctgctctggtcatggagaatgccactgtgggctgtgcaaatgccacgccggttat
gttggcgacaactgtaactgttccacagagacgtcattctgcttctcagatgatgggaag
atgtgtagcgggcgaggaaactgcgtgtgcggccgctgtcagtgcaccgagccaggggcg
tttggagatacctgtgaaaaatgccccacctgccccgatgcctgcggtaccaagagggaa
tgtatcgagtgtcggcttttcaactcggggcggctcgcagacaaccagacctgccagcgc
ttgtgcaaggataaaatcataactgtggagatcctcaaaaaagaagagcctggagcggtc
ctctgcctatataagacagaaaacgactgtgtgatgaagttcacatactctgagcacgcc
agcggccggtccatactcaccgcgctcaaagagccggagtgcagcagtggcccaaacgcc
ttaacagtgttactggctgtagttggcaccatcttgctggtgggagtggttctgctggcc
acctggaaactggtcatcaccatacacgaccgaagagagtttgctcgcttccagagcgca
cgcatacgcgcccgataccatatggcttccaaccctctgtacaagaactccgtctccaca
cattctgcagaaatggaaactttcgagaagtcctacaatggcgggctccactga
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integrated database retrieval system
