Girardinichthys multiradiatus (darkedged splitfin): 124871343
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Entry
124871343 CDS
T08099
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04382
Cornified envelope formation
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04514
Cell adhesion molecules
gmu04810
Regulation of actin cytoskeleton
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124871343 (itga6a)
04514 Cell adhesion molecules
124871343 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124871343 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124871343 (itga6a)
04810 Regulation of actin cytoskeleton
124871343 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124871343 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124871343 (itga6a)
04515 Cell adhesion molecules [BR:
gmu04515
]
124871343 (itga6a)
04090 CD molecules [BR:
gmu04090
]
124871343 (itga6a)
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124871343 (itga6a)
Exosomal proteins of breast milk
124871343 (itga6a)
Cell adhesion molecules [BR:
gmu04515
]
Integrins
Integrin alpha subunits
124871343 (itga6a)
CD molecules [BR:
gmu04090
]
Proteins
124871343 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
DUF4529
Motif
Other DBs
NCBI-GeneID:
124871343
NCBI-ProteinID:
XP_047226552
LinkDB
All DBs
Position
7:26330571..26391774
Genome browser
AA seq
1077 aa
AA seq
DB search
MVLLQQRRPSAVQAALFLLILLLEPSGLRGFNLDTSHVIRKDGEPGALFGFSLALHQQIN
PNKVLLLIGAPKARALKNQRSNFTGGLFKCEITESDNCERVEFDNNEDPDQESKEDQWMG
VSVQSQGPGGKVVTCAHRYQKRHAGSQSVLGRCYFFSQDLTIDLSSDLDGGDWKLCEGRF
GDTDHEMFGMCQQGLGVTFTKDYHYVVFGAPGAKNWQGIVHVAQQNNTLLERGIYDDGPY
EFMETKPVLIPAHSYLGFSLDTGHNIMRSRNLTVVAGAPRAQHKGVVVLLKKESDHLLVE
HLLNGPGLASSFGYDVAVVDLNGDGWEDIVVGAPHFYMKSTDIGGAVYVYINEAGQWDGV
TPTRLNGTKDSMFGLAVENMGDVNQDSFNDIAVGAPQDDEGAGKVYIYHGSAQGIKTNPA
QILSGKEHSIRLFGYSLAGNMDLDGNSYPDLAAGSLSDAALIYRARPVVNIRKHVTVSPE
EIDLSLGCDNSFCFTVKACFKYTANPTSYSQRLIISYSIEADGERRKQGLNSRVIFLTKS
NAESDFQFNDNLELKDQNRESCVPINAGLKDNIKDKMRSILIEVSAEIIEAKGKKIKNGL
PPLMPVLDAAQPSRAVAEVNFLKEGCKNKRICYSNLQMDHSLHYKQISQDAFSQLPTSAH
NVPQFVLSYEKKDLALKVTVTNKNGDDAYEAKLVGKFPDALSYSGVRPITQILCTANQNG
SEAECELGNPFNRNSEVTFYIILSTMGITLDSTEIEIDLQLQTTSSQDISPVKVTSEVIT
EFPLTLSGEAKPSQVSFGGVVKAETAMKTEEEAGSLINFTFRINNLWKPLVPPLSASLHI
HWPRYNKDGKWLLYLVKVTSHGPDNIICSPQSEFHSLKNIWESSPSRTKRENVEKERKLG
RKVAFLSSKNKVLSCERENKCVVLKCPLQGIDGTAVELRSRLWNSTFIEDYASFPTIALD
VKTSLVLSSQAQNIILKSPEVTVRVLVTPDSEVAQFGVPWWIILMAVLAGILILALMVFL
LWKWGFFKRSKQDDSVPRHHAVRVEKETPGYVDGKVEPEVLEKKQWMTTWIDSDSFL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgcagcagagacgaccctctgctgtccaggcggcactttttctcctcatt
cttctgctggagccaagcgggctgcgcggcttcaacctggacaccagtcatgtcatcagg
aaagacggcgagcctggcgctcttttcggcttctccctcgccttgcaccagcaaatcaat
ccgaataaagtcctgttgctgatcggtgcccccaaagccagagctttaaaaaaccaaaga
tccaatttcactggaggcctttttaaatgtgaaatcactgagtctgataactgtgagcga
gttgaattcgataacaacgaggacccagaccaagagagtaaagaggaccagtggatgggt
gtgtctgtgcagagtcagggaccaggtggaaaggttgtgacgtgtgcgcatcgatatcag
aagcgtcatgcaggatcccagtctgtcctcgggcgctgttacttcttcagtcaggatttg
accatcgacttgtcctctgatttggacggtggtgactggaaactctgtgagggcaggttc
ggagatacagaccatgaaatgtttggaatgtgtcagcagggtctgggggtcaccttcacc
aaggactaccattatgtggtgtttggagccccaggagctaaaaactggcaagggattgtg
catgtggcgcaacaaaacaatactttgcttgagaggggaatatatgatgatggaccatat
gagtttatggaaactaagcctgttctcataccagcccacagctaccttggcttctctctt
gacacggggcacaacatcatgaggagccgcaacctgaccgtggtggctggagcaccgaga
gcccaacacaagggagttgtagtcctgcttaagaaagaatctgaccacctcctggtggag
caccttctgaacgggccgggactggcatcctcatttggatacgatgtggctgtggttgac
ctgaatggtgatggatgggaggacattgttgttggagcccctcacttctacatgaagagt
acagacatcggtggagctgtttatgtttatatcaatgaagcaggacagtgggatggtgtc
actcctacccgtctaaacgggaccaaagattcaatgttcggactggcagtggaaaacatg
ggggacgttaatcaggactcatttaacgatattgcagttggagctccacaggacgatgag
ggagcaggaaaagtctacatttatcatggatctgcacaaggaatcaaaaccaaccctgct
cagatcctttcaggtaaagagcacagcattcgattatttggatattctctggcaggaaac
atggacctggatggtaactcttacccagacctggctgcaggatctctgtcagatgcagct
ttaatttacagagcaaggccagttgttaatatcaggaaacatgttacagtgtctccagag
gaaattgacctcagtcttggctgtgataacagtttctgcttcactgtgaaagcatgcttc
aaatacacagcaaatcctacatcctacagccagcggctcataatcagctattctatagag
gcagacggagaacgcaggaaacaagggctgaactccagagtgatttttctgaccaaatct
aacgctgagtcagacttccagttcaatgacaatttggagctcaaggaccaaaacagagaa
agctgtgtccccataaatgctgggcttaaggacaacattaaggacaagatgcgcagcatt
ctcattgaagtttctgcagaaattatcgaagcaaaaggcaagaaaataaaaaacggtctt
cccccgctaatgccagttttagacgctgctcagccaagcagagctgttgcagaggtaaac
tttttaaaggaaggatgtaaaaataaaaggatttgttatagcaatctgcaaatggaccac
agtctgcactacaaacaaatcagccaggatgcgttctcccagttacccacaagtgcacac
aatgtccctcagtttgtcctgagttacgagaagaaggacttggctctgaaggtgacagtg
accaataaaaatggtgacgatgcctatgaagcaaagcttgtagggaaattcccagacgcc
ctgtcgtactctggagttcggcccataactcagatcctctgtactgccaaccagaatgga
tctgaagcagagtgtgagctaggaaaccccttcaatagaaactcagaggtcaccttttac
atcatcctgagcacaatgggtataactctcgactccactgagattgagatcgatctgcag
ctccaaacaaccagttctcaagatatttctcctgtgaaagtaacgagtgaagtgataact
gaatttcctttgacattgagtggggaagccaaacccagtcaggtttcttttggaggtgtt
gtgaaagcagaaaccgctatgaagacagaagaagaggctggtagtttgattaacttcacg
tttaggataaacaacttgtggaagcctttggtccctcctctcagtgcctctctacacatt
cactggcccagatacaataaagatgggaaatggcttctctacctggtgaaggtcacatct
catggacctgacaacatcatctgctcccctcaatctgaattccactctctcaaaaacatt
tgggagagctctccttcccgtacaaaacgggaaaatgtcgagaaagaaagaaaactgggc
agaaaagtcgcctttctttcaagcaaaaacaaagttttgtcgtgtgaaagggaaaacaaa
tgtgtggtgctaaagtgccccctgcaggggattgatggtactgcagttgagctgagatct
cgtttgtggaactccacctttattgaggactacgcctcctttccaaccatagccttagat
gtgaagacttcgctcgtgcttagctctcaggcccaaaacattatcctgaagtctcctgaa
gttacagtgagggtcctcgttaccccggacagcgaggtggctcagttcggagttccctgg
tggatcattctgatggcggttctggctgggatcttgattttggccttgatggtgtttctg
ttatggaagtggggattcttcaaacgctccaaacaagacgacagcgtacctcgccaccac
gcggtgcgggttgagaaggaaactccaggttatgtcgatggaaaagtcgagcctgaagtt
ttggaaaagaagcaatggatgacgacatggatcgacagtgacagttttctatga
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