Girardinichthys multiradiatus (darkedged splitfin): 124871350
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Entry
124871350 CDS
T08099
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
124871350
NCBI-ProteinID:
XP_047226567
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Position
7:18982953..18998985
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AA seq
737 aa
AA seq
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MPPLLGPLITVLLLVVFTNLTSGAYYGHKQHPQPYQPMQHIQHMNMGKGGFPQQQYLGKE
MPYMQYPHYGKELPQIPILKGKENPRKGGNYNGGKGKGLTIPSAVAGVAQGEQGPVGPPG
PEGPPGPPGPPGNGLPGPQGHTGTPGPPGLPGIAKLGLPGLPGKPGVNGEPGHQGKMGPR
GEEGPTGQPGPQGPPGPSGLPGIGKPGIQGLPGQPGAKGEPGHKGLPGLPGLLGPKGDKG
MGLPGQPGHKGLPGPPGPAGPRGLPGFGKPGLDGLPGPQGPPGHKGHPGESGPPGPAGEQ
GQPGPPGLPGQGKSGQNGLPGQPGRTGEKGLPGPPGLPGKPGLPGFGKQGLLGPKGDKGL
GGPPGPPGAKGEKGHGGVPGMLGPPGPNGPPGPPGLIGRPGSIGAPGPKGDCGDGGPKGL
DGAKGDLGPPGLPGKNGLPGELGEPGPRGPPGPSGPKGADGHKGLPGMPGPPGTPGLRGQ
AGLTGERGIQGPQGIPGIDGTAGPIGPPGPTGAKGENGLPGPPGTADVGSPGLPGPVGPQ
GREGPSGPPGQPGQPGPPGPPGEPVFSPEMAGVLSEMGPGLDGVKAGSYDKKIKYGGAEV
MGSSGLEMPAFTAVASTPFPPVGSPVIFDKLLYNGRQNYNPQTGIFTCDIPGIYYFAYHI
HCKGENVWVALMRNHEPVMYTYDEYKNGFLDQASGSAVLPLQPGDTVYIQMPSDQASGLY
AGQYVQSSFSGYLLYPM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccttcttggccccctcatcactgttctcctgcttgtagtcttcacaaatttg
actagtggggcatactacggacacaagcaacacccccagccataccagccaatgcagcac
attcaacacatgaacatgggcaagggaggttttcctcagcaacaataccttggcaaagaa
atgccctacatgcagtatccacactacgggaaggagctcccccagatccccattctcaag
ggcaaagaaaatccacgcaaaggcggaaactacaatggcggcaaaggcaaaggtctaaca
attcctagtgccgtggcaggagttgcccagggagaacaaggcccagttggaccacctgga
ccagaaggacctccaggacctcctggaccaccgggaaatggactacctggtcctcagggc
cacactggaactccgggtccaccaggattacctggaatagcgaaactagggttgcctgga
ctgccagggaaaccaggtgtaaatggcgagcctgggcatcaaggaaaaatgggaccaaga
ggtgaagaaggtcccactggtcaaccaggtcctcagggacccccaggcccgtctgggctt
cctggaataggtaaaccagggatacagggattaccaggtcaaccaggtgccaaaggagag
ccaggtcacaagggtctgccaggactgccaggattactggggccaaaaggagacaaaggg
atgggcctgccaggacagcctggtcataaaggacttcctgggcctcctggacctgctggc
cctagaggcctgccaggttttggaaaaccagggttggatggtttaccaggtccacaagga
cccccagggcataaaggacatcctggagaatcaggtccccctgggcctgctggagaacaa
ggacaacctggcccacctggtctacctggtcaaggaaagtcaggtcaaaatggtctgcct
ggacagccaggaagaacaggtgagaaaggccttccaggaccaccaggtttgccaggaaaa
ccaggacttccaggatttggtaagcaaggactcttaggaccaaaaggtgataaaggattg
ggtggaccacctggacctccaggagccaaaggagaaaagggtcatggtggagtgcccggg
atgcttggaccccctggaccaaatggtccaccaggccctccaggactgattggacgacct
ggaagtataggtgcacccggtcctaaaggagattgtggagatggaggacctaaagggctt
gatggagctaagggtgaccttggtcctccaggactacctggtaagaatggtctacctggg
gaacttggggaaccaggtccaagaggtccacctggaccaagtggtcctaaaggtgctgat
gggcataaaggtctacctggtatgcctggcccccctggaactcctggtttaagaggacag
gctggattaactggggaaaggggtattcaaggacctcaaggaatccctggaatagatggc
acagctggaccaattgggcctccgggtcctacaggagctaaaggcgaaaatggtcttcct
ggtccaccaggcactgcagacgttgggagtccaggcctgcctggtcctgtgggaccacaa
ggaagagagggaccatctggacccccaggacagcctggccaacctggtccacctggacca
cctggtgaacctgttttttctccagaaatggctggagtactttctgaaatgggcccagga
ctagatggtgttaaagctggaagttatgataaaaagatcaaatatggtggggctgaagta
atgggttccagtgggcttgaaatgccagcatttaccgctgtagcatctactccctttcca
cctgtgggtagtccagttatttttgataagctcttgtacaatggccgccaaaactacaat
ccccagacaggaattttcacctgtgacatcccgggcatttattactttgcctaccacatt
cattgcaagggagagaatgtgtgggtggcattgatgagaaaccacgagcctgttatgtat
acatatgatgaatacaaaaatggtttcttagaccaagcatcaggaagtgcagtactacct
cttcaacccggggacactgtgtacattcagatgccatcagatcaggcctccggactttac
gctggacagtatgttcagtcctccttctctgggtatttgctctatccaatgtaa
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