Girardinichthys multiradiatus (darkedged splitfin): 124871545
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Entry
124871545 CDS
T08099
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
gmu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124871545 (ube4b)
04120 Ubiquitin mediated proteolysis
124871545 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124871545 (ube4b)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124871545 (ube4b)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
U-box type E3
124871545 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
124871545
NCBI-ProteinID:
XP_047226891
LinkDB
All DBs
Position
1:complement(21613044..21638155)
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AA seq
1379 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGVSPQPVPAAS
QSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDP
ASCEKSMSQVDVDSGIENMEVEDSDRREKRNSTEKETSANSDVSEDQALLLICKILRVSW
KEQDRDVIFLPSLAADFHQNPKDVCSDFKDLISQILMEVLMMSSQSNIHNPFASLTATSQ
PIATAKSPDHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLYGCSSPHPLALNAAERTCPS
LSTPTTPTVPSTTSMPQFVVPPSPPAAASTRQCLNPSSTPMPISQRYRPYSVTTPWAASS
PLSPVHRGYSFPSLSPSPTGLSVPPNTPLPATPLSPQSLILSSPSSGNHPPSSTLPMVPS
SPRLSARQAAFAARIPSSSPLSFLFFALSDMSQDSSDEESEGEEEDFAQVQFGSSLGACG
GGMPCDSASDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQC
ISHVALVLQGSLTQPRSPLQQSLLVPYMLCRNLPYGFIQELVRITHQEEEVFRQIFIPIL
HGLALAVKECSFDSDNFKFPLTALAELCEMKFGKTHPVCNLVTSLPLWCLKPLSPGCGRE
IQRLSYLGAFFSLSVFAEDDTKVGDKYFSGPAITIENTRVVSQSLQHYLELARGDLFKVL
HNILLNGETRELALNYMAALVNYNVKKAQMQTDDKLVSTDGLMLNFLWVLQQLSMKIKLE
TVDPYYIFHPRCRLVVSLEETRLKATMEELKSWMNELHEDPSKFSEPKFPTECFFLTLHT
HHLSILPCCRRYIRRLRAIRELNRTVEELKNSEGQWKDSPLASRHREMLKRCKTQLKKLV
RAKACADVGLLDENLLRRCLQFYSTVIKLILRMVDPAYPNITLPLNPEIPRSFAALPEFY
VEDVAEFLLFVVQYSPQVLYEPCVQDVVTFLVVFICSQHYIRNPYLIAKLVEVLFVTNPA
VQPRTQRFSEMMENHPLSIKHLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLW
QNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQL
PREQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFN
LQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFE
DVISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDP
VMLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPDLKERIHAWMREKQGTRPL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagacgagatacgcagaagacgcctggcacggctggcaggagga
cagacatcacaacccagcacccccctcagtacccccctcacatccccacagagagagact
ccacctggacccctccctggcccctcaggtgtctccccccaacctgtaccagctgcctct
caatcattaggtctcaatgttcacagtggtacacctgccacatcccctatgggcacctct
ggggtggcgtatggtagtcagagcagcgaaggtgtaagctccctctccagctccccctcc
aacagcctcgagacacagtctcagagtttgtctcgatcgcagagcatggacattgaccct
gcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggattgagaacatggag
gtggaggacagtgatcgcagggagaagagaaactcaactgaaaaggaaacctctgcaaac
tccgatgtgtctgaagatcaggctctgctcctgatttgtaagatcctccgcgtatcgtgg
aaggagcaggacagagacgtcatctttctcccttcactagctgcagattttcaccaaaac
cctaaagacgtgtgttccgacttcaaagacctcatcagccagattctgatggaggtctta
atgatgtcctcccagtcaaatatccacaaccctttcgccagcttgaccgccacctctcag
cccattgctacagcgaaatcccccgatcaccgcctgacgctggtgcagccttctagccaa
ggtggcagcccaatgggccccagtgctgggtcatttggagccagctcactgtccagttta
tatggatgcagtagtcctcatccattggctttgaatgcagcagagaggacttgcccgtct
ctctctacccccactacacccactgtaccttctacaacctccatgccacagtttgtagtt
cctcccagcccgcctgctgctgccagtactaggcagtgcctcaacccttcatctacaccc
atgcctatctctcagcgatatcggccctactctgtcaccactccctgggcagcttcttcc
ccactgagcccggttcacagaggatatagtttccccagtctttcccctagtcccactggg
ctttctgttcctccaaacaccccacttccagcaacacctttaagtccccagtctcttatt
ttgagctcgcctagttctggcaaccaccccccctcctcaacccttcccatggtgccttct
tctcccagactgagtgctcgacaggctgcctttgctgccaggatcccatcatctagcccc
ctgtcgttcctgttttttgccctttctgacatgtctcaagacagcagtgatgaagagtca
gagggggaggaagaggattttgcacaggttcagtttgggtccagtctgggtgcctgtgga
ggggggatgccatgcgattcagccagcgaccgttttaccattgaagcatgcaaagagaca
gagatgctgaactacctcattgagcgttttgacagcgttggcatggaggaaaggaaagct
cccaagatgtgcagccaaccaaatgtcagccagcttctcagtaacattcgctctcagtgt
atctctcatgttgcccttgtcctgcaggggtccctgacccagcctcggagcccactccaa
cagtctctgctggtaccttacatgctgtgtcggaaccttccgtatggcttcattcaggag
ctggtgcgcatcacccatcaggaagaggaagtgttcagacagatcttcattcccattctc
cacgggctcgcactggcagtgaaagaatgttcctttgacagtgacaactttaaatttccc
ctcacggcattagctgagctgtgtgaaatgaagtttggaaagacgcaccctgtgtgcaac
ctggtgacatcacttcctctgtggtgtctcaaacctctgagccctggttgtggcagagaa
attcagagattgtcctaccttggagcgttctttagcctttcagtatttgcagaggatgat
accaaagtaggggacaagtatttctctggcccagccatcaccatagagaacaccagagtt
gtcagccagtcattgcagcactatctggagttggcaaggggtgacctttttaaggttctc
cataatattctgctgaatggagaaacgcgcgagttagctcttaattacatggcagctcta
gtcaactacaatgtgaagaaagcgcagatgcagactgatgacaagctggtgtcaacagac
ggcttaatgctgaacttcctatgggtgctgcagcagctgagcatgaagataaaactagag
acggtggacccctactacatcttccatccacggtgtcgccttgtcgtcagcctggaagag
actcgtctgaaagccaccatggaggagctcaaaagctggatgaatgaactgcatgaggat
ccctcaaagttctcggagcccaagttccctaccgagtgtttcttcttgacacttcacacc
caccatttgtccatcctgccgtgctgtcggcgctacatccgcagattgcgcgccatccgt
gaactcaacaggactgtagaggagctaaaaaacagtgagggccaatggaaagattctccc
ctggctagtcggcacagagaaatgctgaaacgatgtaaaacccagctcaagaaactggtg
cgagccaaagcatgcgctgacgtgggccttctggacgagaacctgctgcgcagatgtctg
cagttttacagcacagtcattaagctcatacttcgcatggtggaccccgcatatccaaac
attacccttcctttgaaccccgagattcccagaagctttgctgctctgccagagttttac
gttgaagatgtggcagagtttctgctttttgttgtgcagtactcgccccaggttttatat
gaaccgtgtgtgcaggatgtcgtcaccttcttggtggtgttcatttgcagtcagcactac
atcagaaacccctaccttatagccaagttggtggaggtgctgtttgtcaccaaccctgct
gtccagcctcgaacgcagagattctctgaaatgatggagaaccacccgttgtctatcaaa
cacctggtccctgctctcatgaagttttacactgatgttgagcacactggtgctaccagc
gagttctatgataagttcactatacggtaccatatcagtaccatcttcaagagtctctgg
cagaacattgcccaccatggcaccttcatggaggagttcaactctggcaagcagtttgtg
cgctacatcaacatgctaattaatgacaccaccttcttgttagatgagagccttgagtcc
ctgaaacgtatccatgaagttcaggaagagatgaagaataaggagcagtgggagcagctg
cccagagagcagcagcagagccgccagtcccagctgactcaggatgagcgagtgtctcgc
tcctatctggcactggctacagaaacggttgaaatgttccacatcttaaccaagcaggtt
cagaagcctttcctcaggcctgagctcggacctcgtttagctgctatgctgaactttaac
cttcagcagctctgtgggcccaagtgtcgggacctgaaggtggagaacccagagaaatat
ggctttgagcccaaaaagctgttagatcaactgactgatatctaccttcaactagactgt
gcccgctttgctaaagcaattgcagatgaccagcgatcatacagccgtgaactttttgag
gatgtgatttccaagatgcgaaaggctggtattaagtcctctattgccattgagaaattc
aagctgctatctgagaaggtggaagaaatagttgctaagaactcccagtcagagatggac
tacagcgatgcacccgatgagttcaaagaccctctgatggacacactgatgactgaccct
gtgatgctgccctcggggaatattatggacagatccatcatcttgcgccacctgctgaac
tctcccactgaccccttcaaccggcagcccctcacagagagcatgctggagtcagtgcct
gacctgaaggagagaatccatgcctggatgagagagaaacagggcactcggcctctctaa
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integrated database retrieval system
