Girardinichthys multiradiatus (darkedged splitfin): 124871735
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Entry
124871735 CDS
T08099
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124871735 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124871735 (prpf40a)
Spliceosome [BR:
gmu03041
]
Complex A
U1 snRNP components
U1 related factors
124871735 (prpf40a)
Complex B
124871735 (prpf40a)
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
124871735
NCBI-ProteinID:
XP_047227204
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Position
7:30246448..30266409
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AA seq
883 aa
AA seq
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MSSTETNNGPSQAAPYAAVPPAVIPPPFMGPPGIPPHFPPMGIPPMAQRPPSMTPMPPGI
MPPGIMPPMTAPPMGQMPSMIPPMMPGMMLPPRIPAATVQPTGPPGVDSTVPTAAAPGTT
SATNGSPQEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPWK
EYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTETAAPGTIAAPTVQADKN
AATMATVKEVETAAAVPEEQQSQVTVHQTAEVKAVEAPVTSSESAVVTESKPSVEVIEEE
RPELQKKTFKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFSELEVWSCV
PERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRAMEKEEEEDKQKTLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGFLVEVNTSFEDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKTMLKQATPPLEPEATWEEVRERFLKEAAFEDVTLESERKRIFKDFMHV
LEHECQHHHSKTKKHSKKSKKHHRKRSRSRSASESEDEEYHKKKKRSQSKSPSEHSSSGE
SERSYKKSKKHKKKGKKRRHKSASPDSDGEKKGRERDGKRERDSEKDKENDKTRGKSRSE
SKQKSPKRKAAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaccgagactaataatggcccgagccaagcggcaccttatgcagctgtaccc
cctgcagtgatacctcctccatttatgggaccaccaggaatacctcctcactttccgcct
atgggaatacccccaatggcacagcgaccacccagcatgactccaatgccaccagggata
atgccaccaggcataatgccaccaatgactgctccaccaatgggacagatgccaagcatg
ataccgcccatgatgccgggcatgatgctgccccctcgtatcccagctgcaaccgtgcaa
ccaacgggaccacctggtgttgattccacagttcctacagccgcggcacctggaacaact
agtgcaacaaatggatccccacaggaagaacagccaaaaaagaaatctgtgtggacagaa
cacaaatcattagatgggaaaacttattattacaatacagaaaccaaacaatctacatgg
gagaaaccagatgaactgaaatcacctgcagagcaaatgctgtctaaatgcccctggaag
gagtacaagtctgacacagggaagccttattattacaactctcagacaaaggagtccaga
tggaccaaacccaaagagctggaggatctggaagctatgatcaaagcagaggagagtgga
actacagagacggcggcccctggaacgattgcagctcctacagtgcaagccgataaaaac
gcagccactatggcgaccgtaaaggaggtggaaactgcagcggcagtccccgaggagcaa
cagtcccaggtgaccgtgcatcaaacagctgaggtcaaggctgtggaggcacctgtgact
tcctcagagagcgctgttgtcacagagagcaaacccagcgtcgaagtcatagaagaagag
cgacctgaacttcagaagaaaacctttaagtggaacacaaaagaagaagccaagcaggcc
tttaaagagctgctgaaggagaagggtgtttcctcaaactcctcatgggaacaagccatg
aaattgattatcaatgatccccgctacagtgcgcttcctaaactgagtgaaaagaagcag
gcgtttaacgcctacaaagtccaaaccgagaaggaggaaaaggaagaagccaggattaaa
tacaaagagtccaaagagaccttccagaggttcttggagaaccatgaaaagatgacgtcc
accaccagatacaaaaaagcagagcaaatgtttagtgagctggaagtatggagctgcgtt
cctgagagagacaggctggagatctatgaagatgtgctgttctacctggcaaaaaaggag
aaggaacaagccaagcagctgagaaagaggaactgggaggcactgaagaacattctggac
aacatggctaatgtgacatatcgcaccacctggtctgaggcccagcagtatctgctggac
aacccaacgtttgctgaggacgaggagctgcaaaatatggataaagaggatgccctcatc
tgctttgaagagcacatacgagctatggagaaggaggaggaagaagacaagcagaagact
ctcctcagggaaagaagacgacagcgcaaaaacagagagtccttccagaaatttctggat
gagcttcacgaccatggccaacttcactccatgtcctcctggatggagatgtacccgacc
ctgagctctgacatgcgcttcagcagcatgctgggtcagcctggttccactcctttggac
cttttcaaattctatgtggaagacctgaaagcccgttaccacgatgaaaaaagaataatc
aaagatatcctcaaggataaaggcttcctggtggaagtgaacaccagctttgaggacttt
ggatccgtcatcagctcggacaagagagccactactctggatgctggaaacataaagctg
gccttcaacagtttactggagaaggctgaagccagagagagggagcgagagaaggaggaa
gcccgcaagatgaagaggaaagaagcagctttcaaaaccatgctgaagcaggccacacca
ccgctggagccagaggctacatgggaggaagtcagagaaagattcctaaaagaggccgcc
tttgaagatgtgacgctggagtcagagaggaagaggatattcaaagatttcatgcatgtc
ctggagcatgaatgccagcatcaccactccaagacaaagaagcattcaaagaagtccaag
aaacaccacaggaagcgctcacgctctcgatcagcttcagagtcagaggatgaggagtac
cacaagaagaagaagaggtcccagtccaaatctccctctgagcactcttctagtggagaa
tctgagagaagctataaaaaatccaagaaacacaagaagaagggcaagaagaggcgccac
aagtctgcctcaccggactccgacggcgagaaaaaaggaagagagcgtgacgggaagcga
gagcgggattcagagaaggataaagagaacgacaagactcgggggaaatctcgctcagag
tctaaacagaaatctcctaaaaggaaagcagccaaagaggagggtggctgggacacgtcg
ggcagtgagctgagtgaaggagagctggagaagagaagaagaactttactggaacagctg
gatgccccttga
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