Girardinichthys multiradiatus (darkedged splitfin): 124872358
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Entry
124872358 CDS
T08099
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124872358 (rnf180b)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124872358 (rnf180b)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124872358 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
124872358
NCBI-ProteinID:
XP_047228204
LinkDB
All DBs
Position
8:complement(38843322..38851277)
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AA seq
469 aa
AA seq
DB search
MSRYLRWNKLFLLKSLKMDRAMLRCRRCRRVVIDFTCLLTAADESPAGGCSIWHIDADNL
PEWILTSVQQALWTAGKLNCRHCGARLGGFSFLARSDCPCGRDATVHLSKSRVDLDQTPH
VLVVQPRRTSSGTGLLMDLCQSEEEASLDSFQLTCLPCLSPIIPPDALDPLYAAENSHGA
AGHPDKLELHSSVRSAAEHQSDPDHEAWRNVLPWVSEISGGSQSSLELQQTEEVSLRRRF
TSEAEAELEEEADPVLSSFSAWIRQNKRDKNRLKSQRRKQRRRERWLQSQMKEAETESST
DSPLDSEDVDRDGLTCAVCLDVFFSPHTCQPCAHVFCEPCLRRLAKNRATNTPCPLCRCL
ISHTSFHRELDLTAKTLFPKFWATCKQNFQNAPCARWPLPSSQEHSRFFWVNQRRGATAW
GRWHFTPGAFVFNMLGLPHHTFFHIDMILFIFALKLLCCLSVLLCKLIF
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttatttaagatggaataaactgttcctgctgaaaagtttgaagatggacaga
gcgatgctccgctgcagaaggtgtcgcagggtcgtcattgacttcacatgtttgttaacg
gcagcagatgaaagtccagctggtggctgcagtatttggcacatagacgctgacaacctc
ccagagtggatcctgacctccgttcagcaggctctgtggacggcagggaagctaaactgc
cgtcactgcggggctcgtttgggtggcttcagcttcctcgctcgctccgactgtccatgc
ggccgtgacgccaccgtccatctcagcaagagccgcgtagatctggaccaaacgccccac
gtcctcgttgtccagccgaggaggacaagctctgggacaggactgttgatggacctctgt
caaagtgaagaggaggcttctctggacagtttccagctcacatgtcttccctgtttgtca
cccatcattcctccagacgctttggatccactgtatgctgctgaaaactcccatggtgct
gcaggccatccagacaagttagagttgcattcatctgttagaagtgcagcagaacatcag
tctgacccagatcatgaagcctggaggaatgttcttccctgggtttctgaaatatcggga
ggatcacagtcgtctctagagctgcagcaaactgaggaagtttccctcagaaggagattc
acctctgaagcagaagctgagctggaagaggaagcggatccagtcttatccagcttctcg
gcttggatcagacagaacaaaagagataagaaccgtctgaagagtcagaggaggaagcag
aggaggagagaaagatggctgcagagtcagatgaaggaggcggagactgaaagcagtaca
gactcacctctggactctgaggacgtggacagagacggtctgacctgcgccgtgtgtctg
gacgtcttcttcagcccacacacctgtcagccctgcgctcacgtcttctgtgagccgtgt
ctccgaaggctggccaagaaccgggccaccaacacgccatgcccgctgtgccggtgcctc
atctcccacaccagcttccacagagagctcgacctgacggcaaagactctgttcccgaag
ttctgggccacctgcaagcagaacttccagaacgctccgtgtgctcgatggcctctgcca
agctcccaagaacactcacgcttcttttgggttaatcaacggcgcggcgcaaccgcgtgg
ggacgctggcacttcactcccggagcgtttgtcttcaacatgctgggcctgccccatcac
accttcttccacatcgacatgatcttattcatctttgctttaaagttgctctgttgcctc
tccgtcttgttatgcaaactcatcttttga
DBGET
integrated database retrieval system
