Girardinichthys multiradiatus (darkedged splitfin): 124872479
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Entry
124872479 CDS
T08099
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124872479 (cacna1bb)
04020 Calcium signaling pathway
124872479 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124872479 (cacna1bb)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124872479 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
124872479
NCBI-ProteinID:
XP_047228499
LinkDB
All DBs
Position
8:complement(37515178..37729339)
Genome browser
AA seq
2283 aa
AA seq
DB search
MILATIIANCIVLALEQHLPASDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKG
SYLRNGWNVMDFVVVLTGILATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAIVMFAIIGVEFYMGKFHQSCFKPGAERVVDWPCGSESPARTCPNGT
VCQEYWTGPNFGITNFDNILFAVLTVFQCITMEGWVDILYSTNDAVGNNWNWLYFIPLII
IGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLE
EEDEIAEEKSPLDGAWYKRKQNLSVLKRGKIKKDKNDLIGAEEGEDPFADMSSVVPPGSP
FGRASVKSGGKMDSSTYFRRKEKRLRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQ
PEWLTRALYTAELVFLGLFLTEMTLKMYGLGARNYFHSSFNCFDFGVIVGSIFEVIWDMI
KPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALL
GMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSS
IYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSP
MSATNISIAAFVKQNRDALSRRSSVTSIQSPKEQQRSAKTMSVWEQRTNQLRKHNMKTST
EALFNEVDPEEHLRISSTLHLHPDMKTHTDRPLVVEDKNGDQTRPGVQEEPGGPRQGGVR
DSFHTHPRRHYHHRDRNGEEGDSQGGRHHSHHSRSREHNADGSQEKERGGNHEGGQRHHH
QTGSPEEDPRAGGAEERGHRHHRSRRTPKEGNSRLTNDTQEEGKGNGDSNGEKKLHSSCM
AKAHSTLSGDEYKGNKNGFKSNRDKQVDTEEDSLAGSSLQLKRSSLTPSEKQEDADNQKN
STRASQAGLNSNAVHIPVTITAPPRETTVISMNNIDCDNFQLSEEKKDLEEEEAANGPRQ
ILPYSSMFIFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSITLAAEDPVQANAPRNNVL
KYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSLMGSQ
QSVARGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILF
MFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLEYDREEVTAQAREWKKYEFHYDNVL
WAFLTLFTVSTGEGWPLVLKHSVDATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFV
ALIIITFQEQGDKAMSECSLEKNERACIDFAINARPLTRYMPENKQSFQYKMWKFVVSSP
FEYAIMTLIALNTVVLMMKFYGAPVVYESILKYLNIVFTGLFTLECILKIIAFNPLNYLK
EPWNVFDFVTVIGSITDILFTEINTNKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFV
QSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEETSINHHNNFQTFFQALTLLFRSAT
GEAWHEIMLACLSNRPCDKLSGSSGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF
EYLTRDASILGPHHLDEFIRVWAEYDPAACGRICYRDMYKLLRLISPPLGLGKKCPNRVA
YKRLVRMNMPIAEDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDADLKREINRVWPNL
QQKTADLLVTPHKYNELTVGKVYAAHMIFDYYKQNRAKKLQQQNPSGISQNKLCALFRPV
LPFTHLHQAAPPIKPPAPPEPEPESKPEAPPSTTSTTVNSATSRDTVLNKRSNIKHSQSG
DFSQAVGRHKTRRRLQRGQSEDVQYSSRAQHQADPKPGENISDSEGYPSLEGHARAASLP
RLNAEYHRSHPRHAPGTHLAPIVDLSPIKRSASSLTPQHSQQDFRLREHDLERVDKTWSS
AGPDQVQGQDRAHHHHHHHRCHRRRDKDKDKKQKSLEKTSPVQPSCSVGSFEDPSADGLS
RERARERDRSRPHERRHHSSAGEKQRYYSCDRYGGREQFQARSAGPSRSTSPGDSQDSGL
IKQQGITVVKLTSGTNTQGRGRRQLPQTPLTPRPAVAYKTPTSSAPPLSATASTTGPQAR
FGRGISEHDRLLPGHEESKIPVTSIGSDSNSNRQQLDFSQPVLLEEGEDFQDAVSSHGGG
QPSRSAAPTSASQGTAATPGTATSTQGRAAGVPNGYHFTLGSASGPGSRGTAGLGEREEE
DWC
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggcaacgattatcgccaactgcatcgtcttggcattggagcaacatctaccc
gctagtgacaagacgccgatgtcggaacgcctggacgacacagagccctattttattgga
atattctgcttcgaggctgccattaagattatcgccctgggcttcgcgtttcacaaaggc
tcctacctccgcaacggctggaatgtaatggacttcgtggtcgtcctcacaggaatcttg
gccacagtgggttcagactttgacctcagaactctgcgagccgtgagagtgctgaggccc
ctaaaactggtgtcagggattcccagtctccaggttgtcttgaagtccataatgaaagcc
atggttccgctgcttcagatcggcttgctgctcttcttcgccattgtcatgtttgccatc
atcggggtggagttctacatgggcaagttccatcagtcctgtttcaagcctggcgctgaa
agagtggtggactggccgtgtggttctgagtcaccagccagaacttgccccaacggcacc
gtttgccaggagtactggaccggaccgaactttggcatcaccaactttgacaacatcctg
tttgcagtgctgacagtattccagtgcatcaccatggaaggctgggtggacatcctctac
agcactaatgatgctgtgggaaacaactggaactggctctatttcatccctctcatcatc
ataggctcctttttcatgctcaacctggtgctcggtgtcctgtcgggagaatttgccaaa
gagcgagaacgggtggagaagaggcaggagttcctgaagcttcgccgacagcagcagatt
gagagggagctcaccggatacctggagtggatctgcaaagcagaggaggtgttgcttgaa
gaagaagatgagattgctgaggagaagtccccgctggacggtgcgtggtacaagagaaaa
caaaacctttcagttctgaagcgaggcaaaatcaagaaggataaaaatgatctgattggt
gctgaggaaggcgaggatccctttgctgacatgtcctctgttgttccccctggctctccg
tttggtcgggccagtgtgaaaagcggtgggaagatggacagctcgacctacttcagacgt
aaagagaagcggttgcgctttttcatccggcgaatggtgaaagctcaaagtttctactgg
attgtcctgtgcttggtgggcctcaacactctgtgtgtggccatcgtacactacgaccaa
cctgagtggctgaccagagctctctacacagcagagttggtgtttctgggcttgtttcta
acggagatgactttgaagatgtatggcctcggagcaagaaactacttccactcgtccttc
aactgctttgattttggggttattgtgggaagtatttttgaggtcatttgggacatgatc
aaacctggagcatcgtttgggatcagtgtgctgagggccttgaggctactcaggattttc
aaagttaccaaatactggaactcgttgagaaatctcgttgtatccctcctcaactccatg
aagtccatcatcagcttgctcttcctcctcttcctcttcattgtggtcttcgctctgctc
ggcatgcagctcttcggtggacagtttaactttgaagatgagacaccaacaacaaacttt
gataccttcccagcagcgatcctcactgtgttccagattctgactggtgaggactggaac
gccgtcatgtaccatggcattgagtctcaaggaggcgttcgacggggaatgttttcctcc
atctatttcatcgtcctcacactctttggaaactacactctcctgaatgtcttcttggct
atcgctgttgataacctcgccaacgcccaagagctgactaaggatgaagaagagcaggag
gaggcagccaataagaagctagccctgcagaaagctctggaagtaaaagaagtcagccca
atgtcagctactaacatttccattgctgcttttgtaaagcaaaatcgagatgcactctct
cgcaggtcgtccgtcaccagcattcagtcacccaaggagcagcagcggtctgcaaagacc
atgtcagtgtgggagcagcggaccaaccagctgaggaagcacaacatgaagacaagcacc
gaggccctgttcaatgaggtggatcccgaggagcatctcaggatatcaagcaccctccat
ctgcatcccgatatgaagactcacactgaccgaccacttgttgtggaggacaagaatggt
gatcaaacaagacctggagtgcaggaggagccaggagggcccagacaaggtggtgtaagg
gacagcttccacacccatcccaggaggcattaccaccaccgagacagaaatggtgaagaa
ggtgatagccagggaggcagacaccacagtcatcacagccggagcagagaacacaatgca
gatggttcccaggaaaaagagaggggagggaatcatgagggaggtcagagacaccaccac
caaactggttcacctgaagaggatccacgggcaggaggagcagaggaaagagggcatcgc
caccaccgctcccgtcgaactccgaaagagggaaacagccgtttgacaaatgatacacaa
gaagagggaaaaggaaatggggacagcaatggcgagaagaagctgcattcttcctgcatg
gctaaagctcattctactctgagtggtgacgaatataaggggaacaaaaatggattcaaa
agtaacagggataaacaggtggatactgaggaggacagccttgctggcagttctttacag
ctgaagcggagcagtttgactccgagtgaaaaacaagaagatgctgacaaccagaagaac
tccaccagggccagccaggctggcctcaacagcaacgctgtccacatccctgtcaccatc
actgccccacctagagaaaccaccgtcatatctatgaacaacatcgattgtgacaacttc
cagctcagcgaggagaaaaaagatctggaagaggaggaggcagctaacggacctcggcag
atccttccctacagctcaatgttcattttcggacaaacaaacccggtgcgacgcctgtgt
cactatgtggtcaacctgcgctactttgaaatgtgcatcctgatggtcatcaccatgagc
agcatcacactggcagccgaggacccggtgcaggccaacgctccgcggaacaacgttctc
aaatacctggattatgtctttactggagtattcacgtttgagatggtgataaagatgatc
gacctcggactgctccttcaccccggctcttatttccgtgacctttggaacatccttgat
tttattgtggtcagtggagctctggtggccttcgcttgctcgagccttatgggatcacaa
caaagtgtggccagaggaacgaaggggaaggacatcaacaccatcaagtccctcagggtc
ctacgagtcctgcggcctctgaagaccatcaaacggctgccgaagctgaaggctgtattc
gactgtgttgtgaactctctgaagaacgttctcaacatcctcatcgtttacatcctcttc
atgttcatctttgccgttatcgctgtgcagctcttcaaaggcaaattcttctactgcacc
gacgagtctaagggtctggagaaggactgcaggggtcagtttttggagtatgatcgtgaa
gaagtgacggctcaggccagagagtggaagaagtatgagtttcactacgataatgttctc
tgggctttcctaacgctctttactgtctccactggagagggctggccactggtcctgaag
cactctgtggatgccacatatgaagatcagggccccagcccgggcttccgcatggagacg
tccatcttctatgtggtctactttgtggtgtttcctttcttctttgtcaacatttttgtg
gctttgatcatcatcaccttccaggagcaaggagacaaggccatgtcggagtgcagcttg
gagaagaatgagagggcttgtattgactttgccatcaacgccaggccgcttacaagatac
atgccagagaacaagcagtccttccagtacaagatgtggaagtttgtggtgtcgtcacct
ttcgagtacgccatcatgactttaatcgccctcaacacagtcgtgctgatgatgaagttc
tacggagctccagtggtgtacgagtctatcctgaaatacctcaacatcgtcttcactggc
ctcttcacactggagtgcatcctcaagattattgctttcaatccactgaactacctgaaa
gaaccctggaatgtgtttgactttgtgactgtgattgggagcatcacagacattttgttc
acagagataaatacgaacaagttgataaacctgagctttctgaggctgttcagagcagct
cgtctcatcaagctgctgcgacagggctacaccatccgtatcctgctttggaccttcgtt
cagtccttcaaggccttgccatatgtctgcctgcttattgccatgttgttcttcatctat
gccatcattgggatgcaggtgtttggtaacatcgagttaaacgaggagacgtccataaat
caccacaacaacttccagaccttcttccaggctctgactcttctgttcagaagtgcaaca
ggcgaggcgtggcatgagatcatgctggcttgcctcagtaaccgaccgtgtgataaactc
tcaggaagttcagggaaggagtgtggcagtgatttcgcctacttctactttgtgtccttc
atcttcctctgctccttcctgatgttgaatctgtttgtggccgtcatcatggacaacttc
gagtatctaactcgggacgcctccatcctcgggcctcaccacctcgatgaattcatccgt
gtgtgggctgaatatgaccccgctgcctgtgggaggatttgctatcgggacatgtacaaa
ttattgcgtttaatctcgcctcccctgggtctggggaagaagtgccccaacagggtggcc
tataagcgattggtgagaatgaacatgccaatcgctgaggacaacacagttcatttcacc
tccacgctgatggctctgatccgcacagccctggagatcaagctggcatctggcgtcctg
gcacagcgtttgtgtgatgccgacctgaagagggagatcaaccgagtgtggcccaacctg
cagcagaagaccgccgacctgctggtgacgccacataagtataatgagctgactgtggga
aaagtctacgctgcccacatgatctttgactactacaaacagaatcgagccaagaaactc
caacagcagaacccttccggcatctctcagaataaactgtgtgcgctgttccgtcctgtg
ctgcccttcactcacctacaccaggcagcgccaccaatcaaaccacctgccccaccagaa
ccagagccagaatccaaaccagaagccccacccagtaccaccagtaccaccgtcaacagt
gccaccagccgggacacagtgctgaacaagaggagcaacataaaacattcccagtctgga
gatttttcccaggcggttgggaggcataaaacccggaggaggctgcagagaggccagtca
gaggatgtgcagtattcctccagagcacagcaccaggctgatccaaagccgggggagaac
atttcagactcagagggatatcccagcctggagggccatgccagagctgcatctctccct
cgcctgaatgccgagtaccatcggagccaccctcgccacgcccccgggacccacctggca
ccaattgttgacctcagcccaattaaacgctcagcgtcctcattgacgccacagcactcc
caacaggatttcaggttgagggagcacgacctggaacgggtcgataagacctggtcctct
gctggaccagatcaggtccaggggcaggacagagcccaccaccatcaccaccatcaccgc
tgccatcgacgcagggataaagacaaagacaagaaacagaaatctttggaaaaaacgtcc
ccggtgcagccgtcctgctcagtcggctcatttgaagacccttcagctgatggtttgtcc
agagaacgagcgagggagcgggaccgcagccgcccccacgagaggagacaccactcttct
gctggggagaagcagcggtactactcctgcgatcgttacggtggcagggagcagtttcag
gccaggtcggccggtccgagccggtccacatctccgggagacagccaggactctggtctc
atcaaacagcagggaatcactgtggtgaagctgacttctggtaccaacacacaaggccgt
ggtcgcaggcagctcccacagacacccctcacacctcgccccgccgtggcctacaagact
cccacttcctcagctcctccactcagtgccactgcctctacaacggggcctcaggctcgc
ttcggccgtggcatatcagagcacgaccgtctgctcccgggccacgaagagtctaaaatc
ccagtcacctccattggttcggactctaattcgaacaggcaacagttggacttctcccag
ccggtcctccttgaagagggcgaggacttccaggacgctgtgagcagccatggtggggga
cagccttccagaagcgctgctcccacctcagcctcacagggaaccgctgccacgcctggc
actgcaaccagcacgcagggacgggcagcgggagtgccgaacgggtaccacttcaccctc
gggtctgcgtcggggcccgggagcagaggaacagcgggtctcggggagcgggaggaggag
gactggtgctag
DBGET
integrated database retrieval system
