Girardinichthys multiradiatus (darkedged splitfin): 124872480
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Entry
124872480 CDS
T08099
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124872480 (vldlr)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124872480 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Endonuc-BglII
Motif
Other DBs
NCBI-GeneID:
124872480
NCBI-ProteinID:
XP_047228500
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All DBs
Position
8:39085088..39133127
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AA seq
862 aa
AA seq
DB search
MVTSAPGILLLLMWLQHCGSVRGTKTECEANQFQCGNGRCIPSVWQCDGDEDCTDGSDES
SCVKKTCAELDFVCRSGQCVPKRWHCDGEPDCEDGSDESIEICHMRTCRVNEFSCGPGTT
QCIPIFWKCDGEKDCDKGEDEVNCGNVTCALNEFTCASGRCISRNFVCNGEDDCGDGSDE
VECAPSSCAPSEFQCGNSSCIPASWVCDDDVDCQDQSDEAPSHCGRHPTPPAKCSPSEMQ
CGSGECIHKKWRCDGDPDCKDGSDESNCPVRSCGPDQFKCDDGSCILGSRQCNGIRDCPD
GSDEVNCKNSTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLNNG
GCSHICKDMVIGFECDCTPGLQLIDHKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPATGVCKAVGKEPCLIFTNRRDIRRLSLERKEYTQIVEQQRNAVALDADFNQQTIFW
ADLGQRAIYSTVLDKRGDVGIHKKVMDNVQTPLGIAVDWIYKSLYWSDLGTKTISVANFN
GTKRKVLFNRGLREPASIAVDPLSGFMYWSDWGEPAKIEKSGMNGADRQVLVATDIQWPN
GITLDLIKGRLYWVDSKLHMLCSVDLNGDNRNRVLQSADYLAHPFALTVFEDRVFWTDGE
NKAIYGANKFSGSDVITLASNLNDPQDIIMYHELIQLSGTNWCTEKSENDGCSYMCLPAP
QINKHSPKYTCVCPEGQELAADGQRCRPDSSSKDPSEDCRKALIQPTKEANVSTSIQVDS
TARGSAAAWAILPVLLLAMAGAGAYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLSIDITR
HGANVGHTYPAISIVSTDDDLS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccgcaccagggatccttctgctgctaatgtggctccagcactgcggtagc
gtccgaggtacaaagactgaatgtgaagccaatcagttccagtgtggaaacggccgctgc
atcccgtccgtctggcagtgcgatggagatgaggactgcacggatggcagcgacgaaagc
tcatgtgttaaaaagacttgtgcagagttggactttgtgtgtcgcagtggtcagtgtgtc
ccgaagcgatggcactgcgacggggaaccagactgtgaagacggctctgatgagagcata
gaaatctgccacatgaggacctgccgtgtgaacgagttcagctgtggaccaggaaccacg
cagtgcatccccatcttctggaaatgtgatggagagaaggactgcgacaaaggagaggat
gaagtcaactgtggtaatgtcacctgtgctctcaatgagttcacctgtgccagtggccgc
tgcatctccaggaactttgtgtgcaacggcgaggacgactgtggagacggctctgacgag
gtggagtgcgctccgtcctcctgtgctcccagtgagttccagtgtggaaactcgtcctgc
atccctgccagctgggtgtgtgacgatgacgtcgactgccaggaccagtcggatgaggct
ccgtctcattgcggccgccatccaacgccgccggccaagtgctcgcccagtgagatgcag
tgtggctcgggagaatgcattcacaagaagtggaggtgtgacggtgaccctgactgcaag
gatggcagcgacgagtccaactgtcctgtacgtagttgtgggccggatcagtttaaatgt
gacgatggaagctgcatcctgggaagcagacagtgtaacggcatcagagactgccccgac
ggttcggatgaagtaaactgcaaaaactcgacgcagtgtaacgggccagagaagttcaaa
tgtcgtagcggggagtgcatcgagatgagcaaagtgtgcaacaaggccagagactgtcca
gattggagcgatgagccaatcaaggagtgtaatctaaacgagtgtctcctgaacaatggt
ggctgctctcatatctgcaaagacatggtgatcgggttcgaatgcgactgcacacctgga
ctccagctcattgaccacaagacctgtggagacgtcaatgagtgtctgaaccctggcatt
tgcagtcagatctgcatcaatctgaagggaggctacaagtgtgaatgccacaacggctac
cagatggatccggctactggcgtctgcaaggctgttggtaaggaaccgtgtctgatcttc
accaaccgtcgtgatattcgtcgtctgagtctggagagaaaggagtatactcagattgtg
gaacagcagagaaacgctgtggcactggatgctgactttaaccagcagaccatcttctgg
gccgatctgggtcaaagggccatatacagtaccgtcctggacaagcgaggggacgttggt
atccacaagaaagtgatggacaacgtccaaactcctctgggaatcgcggtggactggatc
tataagagcttgtactggtccgatctgggcaccaaaaccatttctgtggcaaactttaat
ggaaccaagcggaaagttctgttcaatagaggcctcagagaacctgcctccattgctgtg
gatcctttgtctgggtttatgtactggtctgactggggagagccggctaagattgaaaag
tctggtatgaatggagcggaccgacaggttctggtggcaactgacatccagtggccaaat
gggatcacgctggatctgatcaaaggccggctgtactgggtcgactcgaagttgcacatg
ctctgtagcgttgacctgaacggggacaacaggaacagagtgctgcagtctgcagactac
ctggctcatccctttgctctcacagtttttgaggatagagtcttctggacagacggtgaa
aacaaagcgatctacggcgccaacaagttctccggttctgacgtaataacgcttgccagc
aatctgaatgaccctcaggacatcattatgtaccatgagctgatccagctgtctggtaca
aactggtgcacagagaaaagtgaaaatgacggttgcagctacatgtgtctacctgctcca
caaatcaacaaacactcccccaaatatacctgcgtgtgtcctgaaggccaggagctggct
gctgacggccagcgctgtagacctgactcttcctccaaagatccctcagaggattgtagg
aaagctctaatacagccaaccaaagaagcaaacgtgagcacgtccatccaggtggactcc
acggccagaggctctgctgctgcctgggccatcctaccagtcttgcttctggccatggct
ggagcgggtgcctatctgatgtggaggaactggcagctcaagaaccagaagagcatgaac
tttgacaacccagtctacctgaaaaccacagaagaagatctcagcatcgatattactcgc
cacggtgccaacgtgggccacacctacccagcgatttcaatagtgagcacagatgatgat
ttatcctga
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