Girardinichthys multiradiatus (darkedged splitfin): 124872734
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Entry
124872734 CDS
T08099
Symbol
ythdc1
Name
(RefSeq) LOW QUALITY PROTEIN: YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124872734 (ythdc1)
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124872734 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
124872734
NCBI-ProteinID:
XP_047228990
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All DBs
Position
8:complement(42708272..42719665)
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AA seq
676 aa
AA seq
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MAADRREDKDGELNVLEDLLTEAPDQDDELYNPETERDISDKKGTKRKSERSSSQDLKRL
RPSSGHAPSRSSASSKRGLGSSLSSKKVSSPRSRHTTAYHHDYYEERKRRRAVREGAREG
PRGRVAEEGRRRESQRGLEGLSRKLRRDERRASPSPHGEDQSEEEAEYSSEPASGSSSTA
ASHVEEEEEEDNQEEEGEEGMEEEEEEEEEGEKEEEEEEEEEEEYDERHGGDGNDYDTRS
EAGDSRSASSVSFSDGESAHSGSASEASGSEKKREKLSSSVRAVRKGMESPTSKLRYILQ
DARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFQSARSVILIFSVRESGKFQGFA
RLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFLKTAHLSNPWNDHKPVKI
GRDGQEIQPKVGAQLCALFPLDESVDVHHVARRIRHKHQTPSELRPRGRPPQREPGRRRP
EEYDLHGRKRPRAEGPPDFNQRAGFIPDLRSQPVDRRFSNVRRDVFLNGSYDYMRDYHHN
VGPPAPWQTLAAYPNVEQQPPHHPPYYHHSHPPPPXPHQAFHHHHPSLAPHEAPPPRFRD
KQRVPQHRAFASSPHDYDMRVDDFLRRTQAVVSSRRERERQRERDRGGPRRDRERDRARD
RDRERERDKERGRYRR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaagacaaagatggagaactcaacgttctggaggatctactg
actgaagctccagatcaggatgacgagctgtacaaccccgagaccgagcgcgacatcagt
gacaagaaaggaacaaagaggaagagcgagcgctctagcagccaggatcttaagaggctc
cgcccttcttcaggccacgccccctccagatcatcagcatccagtaagaggggactaggc
tcatcgttgtcctctaagaaggtctctagtcctcgtagccgccacaccactgcctatcat
catgactactatgaggagcgaaagaggcggcgagcagtacgggagggagcccgggaaggg
ccccggggtcgtgtggcagaggagggacggcgcagagagtcccagaggggcctggagggt
ctgagtcggaagctgcggcgcgatgaaaggcgagcgagcccctccccgcacggtgaagac
caatcagaggaggaggctgagtacagctcagagccagcgtcgggcagctcctccacagct
gcctcccatgtggaggaagaggaggaggaagacaatcaggaggaagaaggagaggagggc
atggaggaggaagaggaggaggaagaggaaggagagaaggaggaggaagaggaggaggag
gaagaggaagaatatgatgagcgtcatggcggtgacggaaatgactatgatacccggagc
gaggcaggagattctcgctctgcctcctcggtcagtttctctgatggcgagtcggcacac
tcaggctccgcctctgaggcttcaggatcagagaagaagcgagagaagttgtcctcgtct
gttcgggctgttcggaaaggaatggagagtccaaccagtaagctgcgatacattcttcaa
gatgcccggttcttcctcatcaagagcaacaaccatgagaacgtttctctggctaaagca
aagggagtctggtccacgctgccggtcaatgagaagaagctgaatgctgcctttcagtcg
gctcgaagcgtcatcctcatcttctctgtgagggagagcggaaagtttcaaggttttgct
cgtttgtcgtcggagtctcatcatggtggttctccgatccactgggttcttcctgccggg
atgaacgccaaaatgctcggaggagtcttcaagattgattggctgtgcaggagggagctt
cctttcctcaagacggctcatctatccaacccctggaacgaccacaagcccgttaaaatc
ggacgagacggacaggagatccaaccaaaggtcggcgctcagctctgtgccctgttccca
ttggacgagagcgtggatgttcaccacgtggctcgtcgcattcgtcacaagcatcagacc
ccgtcagagctacggcctcgaggccgaccgccgcagcgcgaaccgggaaggcgtcgacca
gaagagtatgacctgcatggcaggaagagaccacgagctgaaggtccgccggacttcaac
cagcgagcagggttcatcccggatctacggagccagccggtggacaggagattttccaat
gtcaggcgagacgtgttcctcaacgggtcctatgactacatgagggactaccaccacaac
gttgggcctccagctccctggcagactctggcggcgtaccctaatgtggagcagcagccc
ccccatcaccccccctactaccaccacagccaccccccgccccccnnccctcaccaggcc
ttccaccaccaccacccctccctggcaccacatgaggctccgcctcctcgctttagagat
aaacaacgtgtgccgcagcatcgcgcctttgcctccagtccgcacgactacgacatgcgg
gtggacgacttcctgcggcggacccaggcagtggtgagcagtaggcgtgagcgcgagcgg
cagcgtgagcgggaccgcggtgggcctcggcgggaccgtgagcgagatcgagcgagggac
agagacagggagagagagagggacaaggagaggggccggtaccgcaggtga
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