Girardinichthys multiradiatus (darkedged splitfin): 124872967
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Entry
124872967 CDS
T08099
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124872967
04121 Ubiquitin system [BR:
gmu04121
]
124872967
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
124872967
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124872967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
124872967
NCBI-ProteinID:
XP_047229374
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Position
8:complement(27905779..27908164)
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AA seq
639 aa
AA seq
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MASRAPYELVAKKNTTSAVWQYFGFLANEKGEPVNTDEAICKLCDKNVTARDGNTSNLRT
HLRVNHPLTAARMHLAPSSISATVSTPPADTDAGPKPTTKSTATYTQSTIIGAFGKTTKY
KRDSVRWKTCTDAVTKYLAKEMVSFHTVEKKSFKDMVKVLDAQYELPGRKHFSQTAVPHL
YIKVRDEVQVLLSEAESYSLTTDMWSSVNMTPYMSLTVHTITPEWKLESKCLQTTYFPES
HTADNLAAALRVALQDWQLDEKKLSAITTDNAANISAAIRSLEWLWLNCFGHNLNLAVTN
AMHDNRQKTERALGVCRCIVGAFSHSWQRKSELHKEQVELGLPEHSLITDCATRWGSKLA
MVERILEQAQGIRHVLSDDRRSSLSLTWQDTDVLKAVHDALKPVGDFTDILSGEHYVTSS
SILPILQLCRDNVLALSEYDLQLTKSIKTGILKKLEAKYESDSVRKLMRKCTFLDPRYRG
GYETDASALAETKAELQAEIVNLENQAPAGPVVIIRVEEGEAQAEPPRKRVTLRSLLQKQ
ADAVAGPIGSVEDRVGAEITAYCLEPVIQADKDPLLWWKCAARRFPLMSRVARKHLCVCA
TSSPSERVFSTAGKVVSPQRSLLNPEIVNMLVFLAKNLD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcgcgcaccgtatgaactcgtcgctaagaagaacacgacatctgcagtctgg
caatacttcgggttcctagcaaatgagaagggggagccagtaaatactgatgaggcaata
tgtaaattatgtgataaaaatgtgactgcaagggacggaaacacgtcaaacctaaggacg
catctcagagttaaccatccactcactgctgcgaggatgcatttggccccgagttcaata
agcgcaacagtttcaacacctcccgctgataccgatgcaggaccaaaaccaacaactaag
tccaccgccacttatacgcagtcgacaataataggggccttcgggaaaacaacgaagtac
aaaagggacagtgtccgttggaaaacctgcacggatgcagtgacaaaatacttggcaaag
gaaatggtctctttccacacggtggaaaaaaagtcctttaaggacatggtaaaggtccta
gatgcccagtacgagctaccaggacggaaacatttctcacaaacagccgtcccacattta
tatattaaagttagagacgaggttcaagtactgctgtcagaggccgagagttattcttta
acaactgacatgtggtcatcagttaacatgactccatatatgtccctgactgtccacacc
attacacctgagtggaaacttgaatccaaatgcctccaaacaacgtattttcctgagagt
catacggcggacaaccttgctgcagcgctcagagttgcacttcaggactggcaacttgac
gagaaaaaactttcagccataaccactgacaatgctgccaacatttctgccgcaatcagg
tccctggagtggctgtggcttaactgcttcggtcataatctaaacctggctgtcacaaat
gcaatgcatgacaataggcaaaaaaccgagcgcgccctcggagtgtgccgttgtattgtc
ggggccttttcacacagctggcaacgtaagagtgaactccacaaggagcaagtggagttg
ggactcccagaacatagcctcataacggactgcgcaactcgctggggctccaaactggca
atggtggagcgcatcctggagcaggcccaggggatcagacacgtcttgtctgacgacaga
aggagcagcctgtccctgacctggcaggacacagacgtcttgaaagctgttcacgacgca
ctgaaaccagtcggtgacttcactgatattttgtcaggagaacattatgtgaccagttcc
tctatcctccccatactccagctatgcagggacaatgtgttggctttgtcagaatatgac
ctccagctaacaaagtcaatcaaaactggaattctaaaaaagctagaggccaaatatgaa
tccgattcagtgcgcaaattaatgcgaaaatgcactttcctcgaccctcgttaccgtgga
ggatatgagactgatgccagcgcattggctgagaccaaggcagaattacaggctgagatc
gtgaacttagagaaccaagcaccagcaggtccagtggtcatcatcagagtggaagaggga
gaggcgcaagccgaacccccacgaaaaagggtgactctgagaagtcttctgcaaaaacaa
gccgatgcagtggcaggtcccatcggcagcgtagaagaccgagttggagctgaaataaca
gcctactgtttggagcccgttatccaagcagacaaagacccacttctgtggtggaaatgt
gctgcccggcgttttcccctgatgtcacgggtggccagaaagcacctgtgcgtctgtgcc
acaagctcgccgtcggaacgggttttcagcaccgcgggaaaagttgtaagtccccaacgt
tccctgttaaatccagaaatagttaacatgctggtttttctggctaaaaatcttgactaa
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