Girardinichthys multiradiatus (darkedged splitfin): 124873120
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Entry
124873120 CDS
T08099
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04145
Phagosome
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124873120 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124873120 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124873120 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124873120 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124873120 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124873120 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124873120 (thbs4b)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Phagocytosis
Opsonins
124873120 (thbs4b)
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124873120 (thbs4b)
Exosomal proteins of colorectal cancer cells
124873120 (thbs4b)
Exosomal proteins of bladder cancer cells
124873120 (thbs4b)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124873120 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
DUF7630
EGF_MSP1_1
cEGF
Motif
Other DBs
NCBI-GeneID:
124873120
NCBI-ProteinID:
XP_047229599
LinkDB
All DBs
Position
8:complement(17375978..17400151)
Genome browser
AA seq
941 aa
AA seq
DB search
MILWTSVILIVQLLLNLCLHAEAQALAIYDLLTSPDCLPDLLQGGLAEQGVNEAFILTTF
KMQPKTGTTVFGLFNPRDNSKYFEFTVMGKLNRAVLRYMRTDKRMSSISFNNLVLADGQQ
HRLLFHLKGLQQQGPGGVELHLDCRLVETVRDLPAAFQGLPAGYGMVELKTMQAREQESL
DELKLVVGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSSQMLELTKVINELKDVLIQQV
KETTFLRNTISECQACGLGGTEVVKPRCAPGVCFRNDMCIETENGIECAPCPDGYTGDGF
NCDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYIGLPVEGVGIVFAQTNKQVCDDIDE
CKGPDNGGCTANSVCHNSVGSYYCGSCKSGFTGDQVKGCEPELSCGNSLTNPCDINAECI
RERDGSISCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDTNCRKDNCIFIPNSGQEDAD
RDGQGDACDDDADGDGIPNEQDNCRLKPNVDQRNSDTDSHGDACDNCRMVNNPDQRDTDG
DGKGDACDDDMDGDGLKNFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDIDND
LVGDSCDTNQDSDGDGHQDTKDNCPLVINSSQLDSDKDGLGDECDDDDDNDGIPDILPPG
PDNCRLVPNPDQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLD
PEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFI
FGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDT
NDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTQLVADSGVTIDTTMRGG
RLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSAQHTVDPI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtggacatctgtcattctgatcgtgcagctgctattaaacctgtgtttacat
gcagaggcccaggctttggcaatctatgatctgctcacctcgcctgactgcttgccagac
ctgctgcaaggaggtttggctgaacaaggggtgaacgaggctttcatcttaaccaccttc
aagatgcagccaaagactggaaccactgtgtttggcctgttcaacccaagagacaacagc
aagtattttgagttcactgtcatggggaagctcaaccgagctgtgttacgttacatgcgg
actgacaaaagaatgagctccattagcttcaacaacttggtgctggcggacggccagcag
caccggctgttgttccacctgaaggggctgcagcagcaggggccaggtggggtggagcta
catctggactgcaggctggtagagacggtccgggatcttcctgctgccttccagggtttg
ccagcggggtacggtatggtggagctaaagacaatgcaagccagggagcaggagagctta
gacgaactgaaactcgtggttggggactcgtttgagaatgttgcatcattacaagactgt
cattttcagcaaagggattcagttcaaactttaggggtcaatacaaagcagctgtcaagt
caaatgctggagttaacaaaggtgataaatgagctgaaagatgtgctcattcagcaggtg
aaggaaacaacttttcttcgaaacactatttcagaatgtcaggcttgcggtctgggtgga
acagaggtggtgaagccgagatgtgctccgggtgtctgtttccggaatgatatgtgtata
gagacagaaaacggcattgagtgtgcaccctgtccagatggatacactggagatggcttt
aactgtgatgatgttgatgagtgccagtttaacccctgcttccctggagtaaagtgcgtt
aacaccgctcctggcttccgctgcgacgcctgcccactgggttacatcggcctgcctgtg
gagggcgtgggcattgtgtttgctcaaaccaataaacaggtctgcgatgacattgatgaa
tgcaaaggacctgacaatggtggctgtactgcaaactcagtctgtcacaactctgttggc
tcctattactgtggcagctgtaaatcaggattcacaggagatcaggtgaagggctgtgag
ccggagctcagctgtggaaacagcctgaccaacccctgcgacatcaatgcagagtgcatt
cgagaaagagatgggtctatttcttgtcagtgtggaattggctgggcaggcaacggatac
ctgtgtgggaaagacacagacattgatggatacccagatgaaaaactcaagtgcaaggat
acaaactgtagaaaggataattgcatcttcattcctaactctggtcaagaggatgctgac
agggatggtcagggagatgcctgtgacgatgatgcagatggtgatggtattccaaacgag
caggacaactgccggttaaaacccaatgtggaccagaggaacagtgatacagacagccac
ggcgatgcctgtgacaactgccgcatggtaaacaaccctgaccagcgggacactgatgga
gacggcaagggagacgcctgcgatgatgacatggatggagacggtctgaagaacttcttg
gacaactgccagcgtgttcagaacagagaccagctggaccgggatggagacggagttgga
gatgcttgtgacagctgccctgacatcccaaacccaaaccagtctgacattgataatgac
ctggttggagactcatgtgacactaaccaagacagcgatggtgatggtcaccaggatacc
aaggacaattgtccactagtaattaacagctcccagctggactctgacaaagacgggcta
ggagacgaatgtgacgatgacgatgacaatgatgggatcccagacattttaccaccaggg
ccagacaactgcaggctggtgcctaaccctgaccagattgatgacaacaatgatggtgtt
ggagatatctgcgagtctgactttgaccaggacaaagtgattgaccggattgataactgc
cctgagaatgcagaggtcaccttgacagacttcagagcctaccagacggtggtgctagac
cctgaaggagatgcccagattgaccccaactgggttgtcctcaatcagggaatggaaata
gttcagaccatgaacagtgaccccggacttgctgttgggtacactgcttttagtggagtc
gactttgaagggacctttcacgtgaacacagttactgatgatgactatgccggcttcatc
tttggctaccaggactcgtcgtccttctatgtagtgatgtggaagcagactgagcagact
tactggcaggcaacccctttcagagctgtggctgaacccggcatccagcttaaggctgta
aagtctagatctggccctggggaacacttgagaaactcactgtggcacacaggagacacc
aacgaccaggtgcgtctgctgtggaaggatccaagaaacgtcggttggaaggataaggtt
tcctaccgctggtacttgcagcaccgtccgcaagtcggatacatcagagtgcggttttat
gaaggaactcagctggttgcagattcaggtgtgactatcgacacgaccatgagaggaggg
cgactcggcgtgttctgtttctcacaagaaaacatcatctggtccaatctgaaatatcga
tgcaacgataccatcccagaggatttccaggagttcagcgctcagcacactgttgaccca
atttaa
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