Girardinichthys multiradiatus (darkedged splitfin): 124873246
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Entry
124873246 CDS
T08099
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124873246 (trmt13)
Enzymes [BR:
gmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
124873246 (trmt13)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124873246 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
124873246
NCBI-ProteinID:
XP_047229722
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All DBs
Position
9:463623..481818
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AA seq
473 aa
AA seq
DB search
MAAPLLGRCSFFVQRKNRFCKMIAGKGKRFCGEHATMEEGDGGSKRISCPLDPKHTVSED
NLEKHLKKCNSRDKPKPGYYVENINAGQADKDQKLQQVTLCERSRAELEALVEKLKTAVE
GLQGDVEDRTLSHPILQEELLNPMNGDSAHKHLKQQASILGHLQELGLLKRGHCFVEFGA
GRGKLSHWIHKALKNPENPEICEYQKIINNPETFEDLQLLLVERSSTRFKVDGKHQDAGV
PFERLQVDIQHLDLSKVPLLRKKKLPLVGVGKHLCGAATDLALRCLLETTRVREDPEPPP
KRLKEPETVPKSEDDAETAPPDSSSSTGTSKGPVLGLAVALCCHHRCEWRHYVGQHFFLQ
RGLGAVEFSTFCRMSSWATCGLRLANQSCPSHDPTNQRGEDEDHEAAEETEAVSRFWTAA
EREQVGRLCKLLIDCGRRDFLKTKGFSSRLTRYVETAVTLENVLLTAVPSSSS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccctgctcggtagatgcagcttcttcgtccagagaaaaaaccgtttctgt
aagatgattgccggaaaagggaaacgtttctgtggagagcacgcgaccatggaggagggg
gatggtggcagcaagaggatcagctgtcctctggaccccaaacacacggtgtctgaagac
aacctggagaaacacctgaagaaatgcaactccagagataaacccaaaccgggttattat
gtggagaacatcaatgcaggtcaagctgacaaagaccagaagcttcaacaggtgactctg
tgtgagcgcagtagagcagagttggaggctctggtggaaaaactgaagacagctgttgag
ggtctgcagggcgatgtggaggacagaactttgtcccatcccatcctccaagaagagctt
cttaacccaatgaatggagactctgcccacaaacacctgaagcagcaggcctctatctta
ggtcacctgcaggagctggggctgctcaaaagggggcactgctttgtggagttcggagca
ggtcgaggaaaactgtcccactggatccacaaggccctgaagaaccctgagaacccagaa
atctgtgaatatcagaagatcatcaacaatccagagacctttgaggaccttcagctactg
cttgtggagcgctccagcacccgattcaaggtggatgggaagcatcaggatgccggagtg
ccgtttgagaggctacaggtggacattcaacacctggatctgagtaaagttcccctgctg
aggaagaaaaagctcccgttggttggagtcgggaagcatctctgtggagcagcgacagat
cttgctctccggtgcttattagaaacaaccagagtcagagaggatcctgaaccacctccg
aaacgccttaaagagccagaaactgtgccgaaatcagaggatgatgcagagacagcccca
cctgactccagttcaagtactggtactagtaagggtccagtgctgggcctggcagtggca
ctgtgctgtcaccatcgctgtgagtggcgtcactacgtgggtcagcacttcttcctccag
agaggacttggagctgttgagttctccaccttctgtcggatgtccagctgggctacgtgt
gggctcagactggccaatcagagctgcccatcacatgatcccaccaatcagagaggagag
gatgaagaccatgaagcagcagaggagaccgaagcagtgagcaggttctggacagcagct
gagcgagagcaggtgggtcgtctctgcaaactgttgattgactgcggcagacgtgacttc
ctgaagaccaaaggattcagcagcagactgactcgttatgtggagactgcagtgactctg
gagaacgtcttgctaactgcagtaccctcctcttcttcctga
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