Girardinichthys multiradiatus (darkedged splitfin): 124873327
Help
Entry
124873327 CDS
T08099
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124873327 (rnf13)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124873327 (rnf13)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124873327 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
Hemotin
zf_RING_Vps8_fungal
zf-RING_4
Glucos_trans_II
PHDvar_NSD
RINGv
PHD
FeoB_associated
LapA_dom
DUF7027
Neur_chan_memb
zf-RING-like
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
124873327
NCBI-ProteinID:
XP_047229846
LinkDB
All DBs
Position
9:complement(21405572..21462365)
Genome browser
AA seq
380 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADIAAYSFDNKTETFDDMPARFGYRLP
GDGLKGFLIGARPENACQPIEPPPRENLTGAFIVLIKRFDCNFDMKVLNAQKAGYKAAIV
HNVDSDELISMGSNDLDFLKQIVIPSVFVSELTANTLRDDYLYDKGGHLVLIPDFSLPLE
YYLIPFLIIVGICLILIIVFMITKFVQDRRRARRSRLQKDQLKKLPIHKFKKGDNYDVCA
ICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDSEEGDS
GPDENEEVSESTPLLRSQASTSAHSFGTMSGASPSEQDQDSSEYEDEELDSSDSEEEVTV
ETVVVQMQQPCSDEHDLPRA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtctctgggaatgctgatgctctccgccacgcagatttataccatcttcacc
gtccagcttttcgccttccttaatctgctgcccgtggaggctgacatcgctgcttactca
tttgataacaaaactgaaacgtttgacgacatgcctgcacggtttggctaccggcttccc
ggtgatggactgaagggcttcctgattggtgcccgacctgagaatgcgtgccagcccatc
gaacctcctcccagggaaaacctgacgggcgctttcatcgtcctcatcaagcgatttgac
tgcaactttgacatgaaggtcctcaatgcacagaaggctggatataaggcagccattgtt
cacaatgtggactctgatgaattgatcagcatgggatccaacgacttggatttcctgaag
cagatagtcattccctctgtatttgtgagcgagctgaccgccaatactctcagagacgat
tacttgtacgacaaaggaggacacttggtcctgatcccagacttcagcctgcctctggaa
tactacctgatccccttcctcatcatagtgggaatctgcctcatcctcattattgttttc
atgatcaccaagtttgtccaggatcgccgcagagctcggaggagccgtctgcagaaggat
cagctgaagaagcttcccatccacaagtttaagaaaggagataactatgacgtctgtgcc
atctgcctggatgaatatgaggatggagataaactcagagtcctgccgtgctctcatgcc
tatcacagcaagtgtgtggacccctggctaaccaaaaccaagaagacatgtcctgtgtgc
aagcagaaggtggtcccctcacagggcgactcagattcggattcagaggagggggacagc
ggccccgatgagaacgaggaggtctctgaaagcacgcccctgctccgctcccaggcctcc
accagcgcccactcctttggcaccatgtcgggagcgtcgccctctgagcaggaccaggac
tcctccgagtacgaggacgaagagctggacagcagcgacagcgaggaggaggttaccgtg
gagacggtggtggtgcagatgcagcagccgtgctccgacgagcacgatttgccccgagct
tga
DBGET
integrated database retrieval system
