Girardinichthys multiradiatus (darkedged splitfin): 124873489
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Entry
124873489 CDS
T08099
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03030
DNA replication
gmu03410
Base excision repair
gmu03420
Nucleotide excision repair
gmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124873489 (rfc4)
03410 Base excision repair
124873489 (rfc4)
03420 Nucleotide excision repair
124873489 (rfc4)
03430 Mismatch repair
124873489 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmu03032
]
124873489 (rfc4)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124873489 (rfc4)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124873489 (rfc4)
DNA replication proteins [BR:
gmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124873489 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
124873489 (rfc4)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124873489 (rfc4)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124873489 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
124873489 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_30
AAA_22
AAA_16
AAA_11
DUF815
AAA_24
AAA_19
Mg_chelatase
Gp44_lid
AAA_14
RuvB_N
SLFN-g3_helicase
AAA_5
Cdc6_lid
Kinesin
Hydantoinase_B
wHTH-PRTase_assc
ResIII
Motif
Other DBs
NCBI-GeneID:
124873489
NCBI-ProteinID:
XP_047230131
LinkDB
All DBs
Position
9:46531667..46541476
Genome browser
AA seq
454 aa
AA seq
DB search
MDNSWSHAHHLSFQCTTLTSPGKRKRFIPFDWKLESDVNGSCVHRHPERERRVVSAQKRS
EAAVVTDVKPTTRYFEGSVLKSAGGIMEAFLKGATFQTSRPQKDKATTEPAAEKKAKAVP
WVEKYRPRCVDEVAFQDEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPG
LYRQRVLELNASDERGIQVIREKVKNFAQLTVAGTRSDGKLCPPFKIIILDEADSMTAPA
QAALRRTMEKESRTTRFCLICNYISRIIEPLTSRCSKFRFKPLANQVQEERLLEICEKEK
LKYTKESIAALVQLSEGDLRKAITFLQSAARLNADKEITDQAVIEIAGVVPSTMIDNLVQ
ICFRGTFEKLEVTVRNMVNDGYAATHTLSQLHDCLLEKDITDKQKSAIAEKMAVVGKCLA
DGADEYLQMLSLCSVIMQQVAQSSNSAEQLLLTE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcgtggagtcatgcgcatcatctctcatttcaatgtacgacgctgacgtcg
ccagggaagcggaaacgtttcataccctttgattggaagttggagagtgacgtcaacgga
agttgcgttcaccgtcatccagagcgggaacgccgggttgtttcagcacagaagcgatca
gaagctgctgttgtgactgatgtaaagccaacaacgcggtacttcgaaggttcggtttta
aaatcagctggaggaatcatggaggcctttctcaaaggagcaacctttcagacaagcaga
cctcagaaggacaaggcaacaacagaacctgctgcagagaagaaagctaaggcagttccc
tgggtggaaaaatacagacccagatgtgtggatgaggtggccttccaggatgaggttgta
gcagtgctgaagaagtcactggaaggagcagatcttccaaacctgctcttctacgggcct
cctggaacaggaaagacatcaaccatcttagctgctgccagagaactttatggtccaggg
ttgtaccgacagagggtgctggagctgaatgcttcagatgaacgaggcatccaggtcatc
agggagaaggtcaagaactttgctcagctcactgtggctgggacccgttcagatgggaag
ttgtgtcctccttttaagatcatcatcctggatgaggctgactccatgacggctccagct
caagctgccctcagacggacaatggagaaggagtctcgcaccacccgcttctgtctcatt
tgtaactatattagcaggatcattgagccccttacttccagatgttccaagtttcgtttc
aaacctttagctaatcaggtccaagaagaacgactgctagaaatatgtgagaaggagaag
ctcaaatacaccaaggagagcattgcagcattggtgcagctgtctgagggggatctgagg
aaggccatcacgtttcttcagagcgcagcacgtctcaacgctgacaaggaaatcactgac
caagcagttattgagatagcgggggtcgtcccttccacaatgattgataatttggtccaa
atctgcttcagaggaacatttgagaaactagaggtcacagtgaggaacatggtgaatgat
ggttatgccgccacacacaccctgagtcagctgcatgactgtctcttggaaaaggacatt
actgacaagcaaaagtcagccattgcagaaaagatggcggttgtgggaaagtgccttgct
gatggtgctgatgagtacctgcaaatgttaagcttgtgttcagtgattatgcagcaggtt
gcccaaagctcaaactccgctgagcaacttctccttacagaatga
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