Girardinichthys multiradiatus (darkedged splitfin): 124873569
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Entry
124873569 CDS
T08099
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124873569 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmu03310
]
124873569 (rorca)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124873569 (rorca)
Nuclear receptors [BR:
gmu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124873569 (rorca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124873569
NCBI-ProteinID:
XP_047230254
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Position
9:complement(30215305..30233255)
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AA seq
474 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCMIDRTNRN
RCQHCRLQKCLTLGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAGVGTREENRDLAE
HGRTYRRGSSTTLSDLDDIATLPEGLLFDLPLTPEDGGGDYCNLEMLGGSAGSSSSSQSS
PEQTSLDFVDRNHSIKHEYQLLHDSGLFSHAILNPLPEGCSLLEIERIIQSVVKSHVETS
QYSTEELKRMAWNIYNPEETRSYQTKSTEVMWQQFTVHITNAIQYVVEFAKRISGFLDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTLLFDGKFASAQLFKALGCDDLVSAVFDLAK
TLSRIQMSEDEMALFSAAVLLSPDRPWLTDVQKIHKLQEKVYVGLQRCLQKQGASEEKLA
KMVSKLPMMRSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtgattccctgtaaaatctgtggggacaaatcatcgggcatt
cactatggtgttatcacctgcgaaggctgcaagggcttcttccgacgcagccagcaaaac
aacgctatgtactcctgctcaagacaaaggaactgcatgattgaccggaccaaccgtaac
cgttgtcagcactgcaggctgcagaagtgtctcactcttggcatgagccgtgatgctgtg
aaatttggtcgcatgtccaaaaaacagcgtgacagcctgtacgcagaggtccagaaacac
cagcagtcgcaggagtgtgcgggggtcggcacccgcgaggagaacagagaccttgcagaa
catggccgcacctacagaagaggctccagcaccactctcagcgacctagacgacattgca
accttgccggagggcctccttttcgacctgccgctgaccccagaggacggaggtggagat
tactgcaacctggaaatgctgggaggaagcgcagggagcagctcgtcctctcagagctct
ccggagcagaccagcttggactttgttgacaggaaccacagcatcaaacatgagtaccaa
ctgttgcatgattctggactcttctctcatgccatcctcaaccctctgccggagggctgc
tctctattggaaatagagcgtattatccagagtgtggtaaagtcccatgttgagacaagc
caatacagcacagaggagctgaagagaatggcatggaacatctataaccccgaagagacg
cgctcataccagaccaagtcaactgaagtgatgtggcaacagttcaccgttcacattacc
aacgcaatccagtatgtggtggagtttgccaaacgcatctcaggcttcctggacctctgt
cagaatgatcagatcattctccttaaagcaggctgcatggatgttcttctgatccgtatg
tgccgagcctacaaccctatcaataatacactgctatttgatggaaagtttgcgagtgct
cagctttttaaagctcttggttgtgatgaccttgtcagtgctgtgtttgacttagcgaaa
actctgagtcgtatacagatgtcagaggacgagatggctctgttcagtgcggctgtcctg
ctgtcaccagaccgaccttggctgacagatgtccagaagattcataaactgcaggagaaa
gtttatgtgggtctgcagcgctgcctgcaaaaacagggagcatcagaggagaagctagcc
aagatggtgtctaagcttcccatgatgaggtccatttgtaacctccacatagataagctg
gagtttttccgtctggttcaccccgagacagcgtacactttccctcctttgtacagggaa
gtttttggaagtgaaataaccttcccagactccaccgagggttag
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