Girardinichthys multiradiatus (darkedged splitfin): 124873707
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Entry
124873707 CDS
T08099
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
gmu04144
Endocytosis
gmu04510
Focal adhesion
gmu04540
Gap junction
gmu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124873707 (pdgfra)
04020 Calcium signaling pathway
124873707 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124873707 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124873707 (pdgfra)
04540 Gap junction
124873707 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124873707 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmu01001
]
124873707 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmu04090
]
124873707 (pdgfra)
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124873707 (pdgfra)
Protein kinases [BR:
gmu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
124873707 (pdgfra)
CD molecules [BR:
gmu04090
]
Proteins
124873707 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
V-set
C2-set_2
bpX1
Motif
Other DBs
NCBI-GeneID:
124873707
NCBI-ProteinID:
XP_047230524
LinkDB
All DBs
Position
9:complement(37386737..37409398)
Genome browser
AA seq
1449 aa
AA seq
DB search
MDGLKTYLVCGVILVLMVSAMPGLSSPTIWPKEQELELEPNSLINISCTGESEVVWEDPL
PDGAIVTSNGFTATLLIYNATINHTRYYDCRHKKNEGDLSDLKEIYILVKDHHILFVPEE
PENLVVPHEAEVVIPCRASQLSHAVELIRVPNNEKLHRFYDHRMGFIGELPPGQYLCEAT
LNGQTYQSSTYTVKKVEPQEVNDFEVEVKASKETVRVRQPFNVSCISPFGPAFHQQWIHL
KTQAVDAIQKKQTLPDRVIYTLIIPRATPQDSGSYECSVRHEASGKTRVNSVAVTVFEEN
SFVTLDHRGILQMETVSILAETQFTIYINAYPAPKVSWMKDGQAISERYYIFTKTSHIEE
NRYQSILTFQQPLEKDSGNYTITAISGSHTAHFSFILRTTASTGLHIRPSTVPILLPDKD
EMVVPLHAPFTLTCHGDAKLQWETPFPGSEHSQEDNSGLFVTTMRVDEATVMHSGYYSCL
YGSNITDETKSSSIYIYVPDPDSPYIPFFVNHVLVDRNEIEIPCRVSDPSASVTLVNVDT
NQTVPSDYDSKRGALGIFPTGTYVCKAIINGEEHTSEQYIVHDSIDILQVELSAKRTALL
VGDTITVNCLAQGPYLLEDNWKYPGKPANRGTITVLENRKDREILYTLTIPQASTKDSGI
YSCSITAVASTDTQTKEIAIQVFAGEFLSIKPEFRDHESAELDDIREFTATISSFPDAHV
TWLKDGVPLSDVTAEISTSLRQISETSYVSVLTLIRVREDDSGNYTMRVENGNQSHEVSL
NLVVKVPAVIVDLMDLHHGSATGQSAVCITRGQPTPVVEWFICKNIKKCANDTSSWAPLP
TNSTEITMEAHFDEESNLESQVMFGHLENTLAVRCLAKNEMGAVTREIKLVSNGPHPELT
VAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDTRW
EFPRDRLVLGRILGSGAFGKVVEGTAYGLSCSQPVMKVAVKMLKPTARSSEKQALMSELK
IMTHLGPHLNIVNLLGACTKSGPIYIITEYCFHGDLVNYLHKNRESFLSLSPEKNKKELD
IFGINPSDENSRSYVILSFECKGDYMDMKQVDNTQYVPMLEMSIQESNYDHPSSQKEFDM
DNLPSDDTSEGLTTTDLLSFTYQVAKGMEFLASKNCVHRDLAARNVLLSQGKIVKICDFG
LARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTSLSDVWSYGILLWEIFTLGGTPYPG
MVVDSSFYNKIKSGYRMSKPEHAPQEVYEMMMKCWNSEPEKRPSFMGLSETVASLLPFSY
KRHYEKVNHEFLKSDHPAVTRVCVETDADYVDIPYKNQGKLKDRESGFDEQRLSSDSGYI
IPLPDLDPRSDDDYGKRNRHSSQTSEESAIETGSSSSTYAKREGETLEDITLLDEMCLDC
GDLVEDSFL
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggatggcctgaagacatacctggtctgtggtgttatcttagtgctgatggtttcagct
atgcctggactgtcatcaccaaccatatggccaaaggagcaagagctggagctggagccc
aattccctcatcaatatcagctgcacgggggaatcagaagtagtttgggaagaccctctg
ccagatggtgccatagttacctcaaacggtttcaccgcaaccctcctaatttacaacgca
actattaatcacacccgctattacgactgcagacataaaaagaacgagggcgacctgagc
gatttgaaggaaatctatatccttgtcaaagatcatcatatcctgtttgtcccagaggaa
ccagaaaacctggttgttcctcatgaagcagaggtggtcattccgtgccgtgcatcacag
ctgagccatgccgtggaactgattagagtccccaacaatgagaagctccacaggttctat
gaccacaggatgggctttataggagagctccctcctggtcaatatctgtgtgaggccaca
ttgaatggccagacttaccaaagttccacctacactgtaaaaaaagtggaacctcaggag
gtaaacgactttgaggtggaagtcaaagccagcaaagagacagtgagagtcagacagccc
tttaacgtctcctgcatcagcccctttggcccagcctttcaccagcagtggatccatctg
aaaacacaggctgttgatgcaattcagaagaagcaaactcttcctgaccgggtcatctat
actctgattatcccacgagccacccctcaggacagcggcagctatgagtgctcggtcagg
cacgaggccagtggaaaaaccagagtgaacagcgtggctgtaactgtgtttgaggagaac
tcctttgtcactttggaccacagagggattctacagatggaaactgtcagcattttagcg
gagacccagttcaccatctatattaatgcatacccagcccctaaagtgtcatggatgaaa
gacggccaagcaatatcagagagatattacattttcaccaaaactagccacatagaagag
aatcggtatcagagcattttgacattccaacaacctctggagaaagacagtggaaattac
acaataacagccataagtggatctcacacagctcatttctcatttatccttcgaacgaca
gcttccactggactccatatcagaccatccactgtgcccattctgctaccagacaaggat
gagatggttgtccctctccacgctccttttactctaacatgtcatggagatgcaaaactt
caatgggaaacaccatttcctgggtcagagcactcacaggaagacaacagcggccttttt
gtcaccaccatgagagtggatgaagcgaccgtaatgcacagtggttactacagttgcctc
tatggtagcaacatcacagatgaaaccaagagcagcagcatttacatctatgtaccagat
cctgactctccctacattccatttttcgtgaaccatgtgctggttgaccgaaatgaaatt
gagattccatgtagggtgtctgatcccagtgctagcgtgacactagtgaatgttgacaca
aaccaaactgtacctagtgactatgacagtaagaggggtgctttgggaatatttcctact
ggaacttatgtctgcaaggccatcataaatggagaggagcacaccagtgaacaatacatc
gtccatgattcaatagatatcttacaagttgagctgtctgccaaaagaactgctctgctg
gttggagacacaataactgtcaactgcctggcccaaggaccttacttattggaagataac
tggaaataccctggcaaaccggctaatcgtggtaccataactgtattggaaaataggaaa
gatagagagatcctgtacaccctgacaatcccacaagcctcaaccaaagacagcggcatc
tactcttgttccatcactgccgtagcatctacagacacccagacaaaggaaatagctatt
caagtgtttgccggtgagtttttgtccattaagccggaattcagggaccatgaatctgca
gaactggatgacattcgtgagttcactgctacaatttcctcctttcctgatgcccatgtt
acttggctcaaggatggcgtcccactcagcgatgtgaccgctgagatctccactagtctg
cgacagatcagtgagaccagctatgtgagtgttctcaccttgatccgagtgagggaggat
gacagtggaaactataccatgagagtggaaaatggaaaccaaagccatgaagtcagctta
aacctggtggttaaagtgcctgcagtcattgtggaccttatggacctccaccacggttcg
gccacaggacagtctgcagtgtgcattacaagggggcagccaactccagttgtggagtgg
ttcatatgcaagaacatcaaaaaatgcgccaatgacacgtcttcttgggcacccctaccc
accaactccacagagatcacgatggaggctcactttgatgaggagagcaacctggagagc
caggtcatgtttggtcatctggaaaacactctggcagtgcgatgccttgccaagaatgaa
atgggtgctgttaccagggaaatcaaattggtatccaatggccctcaccctgagctgacg
gtagctgctgctgtactggtgctcctggtcattgtcatcatctcactcattgtcttggtt
gttatctggaagcagaaaccacggtatgagattcgctggagggtcatagagtccgtgagt
ccagacggccatgagtacatctatgtggatcccatgcagcttccatacgacaccagatgg
gaattcccccgagacagacttgtgcttggtcggatcctgggctctggagcctttgggaag
gtggttgagggcaccgcctatggactcagctgctctcagcctgttatgaaggtggcagtg
aaaatgctaaaacccacagcacgttccagtgaaaagcaggctctgatgtctgaactgaag
atcatgacacacctcggaccccatctcaacattgtaaacctcctgggagcatgcaccaag
tcaggccctatctacattatcactgagtattgcttccacggcgacctggtcaactatctg
cacaagaacagggagagcttcctgagcctgagtccagagaaaaacaagaaggagctggat
atctttgggatcaatccttcagacgagaacagcaggagttatgtgatcctgtcctttgag
tgtaaaggagactatatggatatgaagcaggtggacaacactcagtatgtacccatgctg
gagatgagcattcaggaatctaactacgaccacccttcatcacagaaagaatttgatatg
gacaacctgccgtcagatgacacgagtgaaggcctcaccactaccgacctgcttagcttt
acctaccaggtggccaaaggaatggagtttcttgcttcgaaaaattgcgtgcatcgggac
cttgcagctaggaatgtcctgctgtcccagggcaaaattgttaagatttgtgactttggg
ctggccagagacatcatgcatgacaacaactacgtctccaaaggaagcacctttttgcca
gtgaagtggatggcaccggaaagtatttttgacaacttgtacaccagtcttagtgatgtt
tggtcttacggaatcctcctctgggagatatttacccttggtggcacaccgtaccctggg
atggtggtagactccagcttctacaacaagatcaagagtggatacaggatgtcaaaacct
gaacatgctcctcaagaggtgtatgagatgatgatgaagtgctggaacagtgagccagag
aagaggccttccttcatgggcctgagtgaaactgtggcgtctttactgcccttcagctac
aagagacattatgagaaggtgaaccatgagtttttgaagagcgaccaccccgccgttact
cgagtatgcgtggaaactgacgcagactacgtcgacattccgtataagaaccagggaaag
ctaaaggacagggaaagcggcttcgatgagcagcggctgagctcagacagcggctacatt
attccactccctgacctggatcctagatctgatgatgactatggaaagaggaacagacac
agctctcaaacgtctgaggagagcgccatcgagactggctccagcagctccacttatgct
aaacgtgagggtgagaccctggaggacataacactgctggatgagatgtgtctggattgt
ggtgacctggtggaggacagctttctgtga
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