Girardinichthys multiradiatus (darkedged splitfin): 124874220
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Entry
124874220 CDS
T08099
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124874220 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124874220 (mbd4)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124874220 (mbd4)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
124874220 (mbd4)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124874220 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
UFL1
Motif
Other DBs
NCBI-GeneID:
124874220
NCBI-ProteinID:
XP_047231454
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All DBs
Position
1:32651382..32655544
Genome browser
AA seq
450 aa
AA seq
DB search
MDGQSNKEELPHGWIREVRQRKAGKTAGKLDVYILSPSGQRFRSKASLHAYLLQNGGENL
DKSLFDFTSSKNKLTSSETNHSKEKQKRRKKMQANGQQDKMGGQVKSPKNKSKRVFLSVR
HKADDGKVKPAEEAINMDIFQETLEDIVEEAEQICSQAAPSSNLVDDDDVHKSALGVGLL
REKILRLAPSSEKQNSLPAHKNQQESVWTLSVEAAAESENGSEESADTDVAQPHSKGDKK
SNSELMSNADSHRDEEVLPDGSSGSCTPLRDSQNRSNSLEGKRKTSPYFSRKPLKDGLSP
PRRKSLRKWTPPRSPFNLIQETLFHDTWKLLVATIFLNKTSGRMAIPVLWQFFERYPSAE
ATQEADWKPMSELMKPLGLYELRAKTIIRFSDEYLNKQWRYPIELYGIGKYGNDSYRIFC
VEEWRQVTPEDHKLNKYHAWLLENHETLGI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggatggccaaagcaacaaggaagaactgccccatggatggattagagaagtaaggcag
cgaaaagctggcaagactgcaggaaaactggacgtgtacatattaagtcccagtgggcag
aggttccggtctaaagcatccctgcatgcttatctattacaaaatggaggggagaacttg
gacaaaagcctgtttgatttcacctcctccaaaaataagctcacgagctctgaaacaaat
cattccaaagaaaaacaaaagagacggaagaaaatgcaagcaaatggacagcaggataaa
atgggtggacaggtgaaatctcccaaaaataaatctaaaagagtctttttatctgtcaga
cataaagctgatgacgggaaggtaaagcctgctgaggaggctattaacatggatattttc
caagagactttagaggacatagttgaggaggctgagcagatttgctcacaagctgcacct
tcatcaaacttggtggatgatgatgatgtgcacaagagtgctctgggggtggggctgctg
agggagaaaatattaagactggctccttctagtgaaaaacaaaacagcttgcctgctcac
aagaatcaacaagagtcagtctggactttaagtgttgaagctgccgctgagagcgagaat
ggaagtgaggagtcagcagacacagatgttgcacagcctcacagcaaaggtgacaaaaag
tctaattctgagttaatgagtaatgccgatagtcacagagacgaggaggtgctacctgac
ggcagtagtggaagctgcacaccattaagagattcccagaatagatccaacagtttggag
ggcaaacggaaaacaagcccttacttcagcaggaaaccactgaaagatggactcagccca
ccgaggaggaaatctcttagaaaatggacacctccccgctctcccttcaacctcatacag
gaaacccttttccacgacacctggaagcttctggtggccactattttcctgaataagaca
agcggcaggatggccattccagtgctttggcagttctttgaacgttatccgtccgcagag
gcgacccaggaggctgattggaagcccatgtctgaactcatgaagccacttgggctgtat
gagcttcgagccaaaacaatcattcgcttctcagatgagtatctaaacaaacagtggcgt
taccccatcgagttgtacggtattggcaagtatgggaacgattcttacaggatcttctgt
gttgaagagtggagacaggtgacgcctgaagatcacaagttaaacaaatatcacgcttgg
ctgttggagaaccacgaaacgttgggtatctga
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