Girardinichthys multiradiatus (darkedged splitfin): 124874288
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Entry
124874288 CDS
T08099
Symbol
hcfc1b
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1b
KO
K14966
host cell factor 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03083
Polycomb repressive complex
gmu04980
Cobalamin transport and metabolism
gmu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124874288 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
124874288 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124874288 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmu01009
]
124874288 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124874288 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124874288 (hcfc1b)
Protein phosphatases and associated proteins [BR:
gmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124874288 (hcfc1b)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
124874288 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
124874288 (hcfc1b)
MLL-HCF complex
124874288 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124874288 (hcfc1b)
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124874288 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Kelch_2
Motif
Other DBs
NCBI-GeneID:
124874288
NCBI-ProteinID:
XP_047231546
LinkDB
All DBs
Position
1:complement(48543401..48569244)
Genome browser
AA seq
1460 aa
AA seq
DB search
METLTETPAVLQPRWKRVLGWTGPVPRPRHGHRAVSIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVCGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNELYELQASRWEWKRLK
AKSPKKGSPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSTV
VSWEIPPTSGSLPPPRESHTAVMTNRGGVTRLIIYGGMNGCRLGDLWVLDVDSLVWSQSA
LNGTPTLPRSLHSATVINNKMYVFGGWVPLIGDDVKMGAHEKEWECTNNLACLNLETMCW
ETVLMESNEENLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETECPVA
PSRVQLVRANTTSLEVSWGPSKTADMYLLQLQKYDIPSTPASGSTPAASAPTSRTVLAPG
VVPSSNVSAPGSPSAASTKSACRFTCTGRCLVVLLAHPVLCFCXAVLKMATALSASGGTV
RLITTKTPSTMATRPAGVRAAVPAPPGQTPISSSPQMSGMAALAAAAAVTQKIPSSTATA
LCIPAGGSAVNVVNSSATRLLKMAAPQVGWASVVSTPGTSHRPIITVHKSGSVMVSPQPQ
VGGATKTITIVNSPIGLGGGGALIGNHGNLGKVVSVVQTSPVQSGVVTGRAGTSPVTQIL
QTKGALPAGTILKLVTSADGKQTAILSTVQAGSTALKPAVIKTIPVSALQGTIGGNGQIT
ILSTKVGTSGTETLINAIPKMSARSQQGVTQVVLKGAPGMAGTTLRTVPMSGLRLVSPAT
GGTKPAVTTLVVKGTTAGVSSLGTVTGSVSTALLGGANASLTTPITTLTAIATLASQVTT
ATAPSSGPRQVTLITTPSGAEPQPLVQDLPVSIMASPTSEDPGSTTGTTTTTNAEGDAAT
AVTLVCSNPPCETHETGTTNTFTTAGAGGVQQVCSNPPCETHETSTTNTNTVTSSRMNQQ
LQVCSNPPCETHETGTTNTATTATAQQSGDSTNSIFSSDPTSAVSQSTAATIVTHARPIP
GPSLPQEISSLVGADRVEASETLTMVIGEGEKPTLAHSQSEVMMSSGVSSLQVQMASSDG
GLPQQLMSSEGCRSEEVSRTMTFELTTGLVSDQLAVTMATEGAAQPVALHATGTIGEANR
SHDQAVPIVLTPQELAALVQQQHEPEPSSVPTEGLAPADSLNDPAAESQGHQPATSAVIS
AVARLASTFGPAPLVTVGQMRSTAVATPTETTNGITEPATEHTIQLKPVPQENPWFDVGV
MKVTNAVVTHYHIPHDDNMTEDDSCVVPDYSRMKRVELQPGTAYKFRVAGINICGRGVFS
EVSAFKTCLPGFPGAPCAIKISKNLDGAKLTWEPPAVTAGNITEYSVYLAIQSNHPKPPG
LGPAQLAFMRVYCGPDPCCLVQASSLANAHIDYTTKPAVIFRIAARNQKGYGPATQVRWL
QETSKDSKQALKRSGVSQGK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctcactgagacccccgctgtgctgcagccccgctggaagcgggtcctaggc
tggactggtccggttccgcgaccccggcacggacaccgggctgtgtccatcaaggagctg
atggttgtgttcggaggaggaaacgagggaatcgtggacgagctgcatgtctataacaca
gctaccaaccagtggttcatcccggcagtttgcggcgacatcccgccaggctgcgccgcc
tatggcttcgtgtgtgacgggacgaggctgctggtgttcggagggatggtggagtacggc
aaatacagcaatgagctgtatgagctgcaggccagccgctgggagtggaaacgtctgaag
gccaaatctccaaagaagggctcgcccccatgccctcgtcttggacacagcttctctctg
attggctctcgatgctacctgtttggtggtctggccaatgacagcgaggatcctaagaac
aacattcccaggtacctgaacgacctgtactgtctggaactgagaccaggttccaccgtg
gttagctgggagatcccgcccacatccgggtcgctgccacctcccagagagagtcacacg
gcagtcatgacgaacaggggcggagtcaccaggctgattatctacggcgggatgaatggc
tgccggctgggagacctgtgggttctggacgtagactctctggtgtggagccaatcagct
ctgaatgggacgcctactcttccccgcagcctgcattctgccaccgtcatcaacaacaag
atgtacgtgtttggaggatgggttcctctgatcggggacgacgttaaaatgggggcgcat
gagaaggagtgggagtgtaccaacaatctggcctgcctcaacctggagaccatgtgctgg
gagacggttctgatggagagcaacgaggagaacctgcccagagctcgagcgggtcactgc
agtgtggccataaactcccgactgtacatttggagcggcagggacggataccggaaggcc
tggaacaaccaggtgtgctgcaaggacctgtggtacctggagacagaatgtcctgtggct
ccgtcccgggtacagctggtccgcgccaacaccacctctctggaggtgagttgggggccg
tctaagactgcagacatgtacctgctgcagctgcagaagtacgacattccgtccacacct
gcttctggctccacccctgctgcatcagcaccaaccagccgtactgtcctggcgcctggt
gttgttccatcttctaacgtctcagcacctggaagcccatcagctgcaagcaccaaaagt
gcatgtaggtttacctgcacaggtaggtgtttagttgtgcttcttgctcacccggtgttg
tgtttctgcnnagcggtcctgaagatggcaacagctctaagtgcatcagggggaactgtc
agactgatcacaaccaaaactcccagcaccatggcaacacgtcctgcaggtgtccgtgca
gcggtacctgctccacccggtcagacgccaatcagcagcagtcctcagatgagtggcatg
gcagcactggcagcggcagctgcagtaactcagaagatcccttcatctacagcgacagcc
ctctgcattcctgcagggggcagcgcagtgaacgttgtgaacagctcggccacgcgcctg
ctcaagatggccgcgcctcaggtgggttgggcttcagttgtttccacacctgggacctca
caccggccaatcatcacggtgcataagtctggctcagtgatggtctccccgcagcctcag
gtgggcggtgccacaaagaccatcaccatcgtcaacagtccaattggactgggaggaggc
ggagctttgatcggtaaccatggaaacctggggaaggtggtgtcagtggtccagaccagt
ccagtccagagtggagtggtaactggtcgggctgggaccagtccggtcactcagatcctt
cagacaaagggcgctctacctgcaggaacaatcctgaaactggtgacctcagcagatgga
aagcagaccgccatcctgagcacagttcaggctggatccacagcactcaaaccagccgtc
atcaagaccatcccagtgtcagctctccagggaacaataggtgggaacggtcaaattacc
atcctgtccaccaaggtgggaacttcaggaactgaaactttaatcaatgctatccccaag
atgtctgcaagaagtcagcagggggtaacacaggtggtgctgaaaggagctcctgggatg
gctggtaccaccctcagaaccgtcccgatgagcggactcaggctggtttctccagcaact
ggtggtaccaaacctgctgtcaccacgctggttgtcaagggaaccacagcaggggtctcc
agtctggggacggtaacaggaagtgtctccactgccttgttgggtggagccaatgcctct
ttgaccacacccatcactactctgacagccattgccacattggccagccaggttactacg
gcaaccgcccccagctcaggacccagacaggtgactctgattacaacacctagtggtgct
gagccacagccgctggtccaggacctgcccgtctcaatcatggcctctcctacttcagag
gatccaggaagtactacaggtactactacaaccacgaatgctgagggagacgcagccaca
gcagtgactttggtctgttccaacccaccctgtgagacccatgagactggtaccaccaac
accttcaccacagctggagctggaggagtccagcaggtgtgctcaaatccaccatgtgag
acccatgagaccagtaccaccaataccaacactgtgacctcatcaagaatgaaccagcag
ctgcaggtgtgctctaatccaccctgtgagacccatgagaccggtaccaccaacaccgcc
accacagctacagcgcagcagagtggagactctacaaactccatcttctcatctgatcct
acctctgctgtcagtcagagcacagcagctaccatagtgacacatgccaggcccatacca
ggtccatctctgccgcaggaaatctcctcattggttggagctgacagggtggaggcctca
gagaccctaaccatggtgataggagaaggggaaaagccaacactggcacacagccaatca
gaggtcatgatgtcatcaggagtgtcatcgttacaggttcagatggcatcttcagatgga
ggtcttcctcagcagctgatgtcatcagaggggtgtagaagtgaagaggtttccaggacg
atgacctttgagctgacaacaggtctggtctcagatcagctggccgttaccatggcgacc
gagggagcagcacagccagtggctctacatgcaactgggaccattggtgaggctaaccga
tcacatgatcaggccgtccccatcgttctgacgccacaggagctggcagcgctggtccaa
cagcagcacgaaccagaacccagcagtgtgcccacagagggccttgctccggccgatagc
ctgaatgacccggccgcagagagccaaggacaccagcccgccacctcagctgtgattagc
gctgttgcccgattagccagcacatttggccctgcccctttggtgacagtcggccagatg
aggagcacggcggttgccacgccaacggaaaccaccaacggcatcactgagcccgccaca
gaacacaccattcagctaaagccggtaccgcaggagaacccatggtttgatgttggcgtc
atgaaggtcaccaatgccgttgtcacgcattaccacatcccccatgacgacaacatgact
gaagatgactcttgtgtggttccggattacagtcggatgaagagggtggagcttcagcca
ggaactgcctataagttccgggtggcagggatcaatatttgtggccgcggtgtcttctcc
gaggtgtcggcatttaaaacatgtctccctggattcccgggggctccgtgcgccatcaag
ataagcaagaacctggacggggccaagctcacctgggagccccccgctgtcacagcaggt
aacatcacagaatactctgtgtacctggccatccagtccaaccatcccaagcctcctggg
ttgggtccggctcagctggctttcatgagggtgtactgcggccctgacccatgctgcctg
gttcaggcttccagcctcgccaacgcccacatcgactacaccaccaagcctgccgtcatc
ttccgcatcgccgcccggaaccagaagggctacgggccggccacgcaggtccgatggcta
caagaaaccagtaaagactccaaacaagctctgaagcgaagtggagtttctcagggcaag
taa
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