Girardinichthys multiradiatus (darkedged splitfin): 124874383
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Entry
124874383 CDS
T08099
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu02010
ABC transporters
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124874383 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124874383 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmu02000
]
124874383 (abca7)
Transporters [BR:
gmu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124874383 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
124874383
NCBI-ProteinID:
XP_047231680
LinkDB
All DBs
Position
9:13043933..13101261
Genome browser
AA seq
2374 aa
AA seq
DB search
MGFIRQLYLLLWKNITYRRRNKIQLLIELLWPLFLFVILISVRHSDPPYKQGQCHFPNKA
LPSVGTMPWIQSIICNINNPCFHSPTPGETPGQVGNFDNSILSRLFVDTQAVLSYSGNRS
FFTFQELMGSVRLLGERFGSFPSLPVKEYLRPNETLSSFLLTNGSLSSSTVDQLMKAHLN
FQALLTGAQTPLKVLVCNATIVGQFLVVDGGAADMTALQTELCELPADVLRDAERLFLSQ
LDVTKFLTRDRLIASAEELRIVSQAITSVSQELAVLIDDLSSLSSFAEMNEALSLLYPES
RTALPSESFRAFSTIMCGHPKIGGERIPSLNWYEDNNFKSLLGINGTEDEVLDSNNKTTP
FCRSLIQSLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVRQIMKEVNKTFEDLQILQDLN
DAWIEVGPQIKNYMETSVEIRLLQDLLRRPEIAVMVNMRLENTTWTASRLARFLSTPSPD
NLRKPEAPLTWLDVYNNIGSTIGILAQVTKCFSLDKLEGLGTEGQLIDRALELLEDRQFW
AGVVFLLPNTSSSELPPHITYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYIQDLVERAVNYVLTGVKQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYTVA
MIIKGMVYEKEARLKETMRIMGLSTGTLWLSWFISSLVPFLISAVLLIGLLKWGDILPYS
DPTIVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTF
THRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRDSPVEGDTYSFTTSINMLYVDAF
IYAAAAWYIEAVFPGQYGIPRPWYFIFQLNFWGGIPLEVGMPIPPAPADQDEDHIETEPN
NMNLGVNIKNLVKIYKKGGKMAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRYDMDIIRKTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLSEEKVMAEIS
VLLADVGLLHKRHDQTKNLSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLSDRIAIISKGKLCCCGSPLFLKSKLGSGYYLTVVKRE
EISTSTPSNSSICTSASTSTTRLPPFVKDSESSLSEDTGLGSEESSSYLAALLALVQQHV
PGARLVEESKREAVINVPQAAAKDGSLAVFLSELDQRLPELGISSYGLSDSTLEEIFLRV
AEETGVDADPASQQPTEPSSGQRPSVQKDEDQPAEEPESGRKRARKKEPQETDLLSGDGQ
GLVPLTGWWLTWQQLRALFVKRWLYARRSRRGLFAQIVLPAVFVLIALLFSLIVPPFGKY
PALELQPWMYGEQYTFFSNDAPGNPAMENLLEALLDQPGFGTRCMEREEEDNSTSPQCDA
ERGGPFIRPQISFSTWQMLNRGNWSRDSPSPECQCSTEETRRMLPECPDGAGGIPPPQMK
RGTGDILQNLTKYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGRNTQNVSQVQH
LQDSVMAIRTRYQVSQNSSLDQLLKKLPEFLGGMHSENNVKVWYNNKGWHAMVSFVNVMN
NGLLRASLPPGPERRRHGITVYNHPLNLTKEQLTEIAMMTTSVDVLVSICVVFAMSFVPA
SFVLFLIEERVSKAKHLQFVSGVKPILYWLSNFVWDMLNYSVPAMMVVLIFISFQQQSYV
SETNLPALILLLLFYGWSITPLMYPASFVFSVPSTAYVVLTSVNLFIGINGSIATFVLEL
VVDEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGSKQTLDPLQWDFVG
KNLFAMAAEGVIFFIFTILLQYKFFIYFRPWWNNPQLPPLGPEDEDVARERERVKSGKAQ
SEILTMIDLSKVYKAGKKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTPITHG
EAFLSQHSVQTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVTKVAQWG
VKKLGLTQYAEQAAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIL
SVTKEGRAVILTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADT
KLDADSCPVDTYMRTSFPIIELKERHKSVLQYQLPSHACCLARVFDVLANNYEELGIVDF
SISQTTLDQVFVSFAKEQTDDDCLTDVVADNGAARLNLPTRINPPIIQSQQPTKPRQQRK
SSQLPAKAPKSDPKGSKPKTAKARKIRSNGETSSSVPMSRLPQAEEKGPESDSSNGGVQR
ESSKAHRSKHRDESSSKDPATLFIVGTNSQESSL
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgggttttatccggcagctctacctcctcctctggaaaaatatcacataccgcaggcgg
aacaagatccagctgctcatcgagctcctctggcctctcttcctctttgtcatcctcatc
tctgttcgtcactcagaccctccttacaaacaaggccaatgtcacttcccaaacaaagcc
ttgccgtcggtaggcaccatgccctggattcaaagcataatctgcaacatcaacaacccc
tgcttccacagcccaacgccgggggaaacaccgggccaagtgggaaactttgacaactcc
atactgtctcgtctttttgtggatactcaggcagttttgtcctacagtggcaaccgaagc
ttcttcacctttcaggagctgatgggaagtgtccgactcctgggggaaagatttggatca
tttccaagtctcccagttaaggaatacctgagacccaatgagacgttgtccagttttctc
ctgactaacggcagcctgtcgtcttcaactgtggaccagctgatgaaggctcaccttaat
tttcaggctctattaactggagcccagacgccgctgaaagtcttggtgtgcaatgcaacc
attgtgggacagtttctggtcgtagacggaggtgcagccgacatgacggctctccagact
gagctctgtgagcttccagctgatgtcctgcgggatgctgagcgccttttcctctctcag
cttgatgtgaccaagttcctaacaagagaccgtctaatcgccagtgctgaggagctcagg
attgtcagtcaggccatcacctcagtttcccaggagctcgctgtccttatagatgatttg
tcctccctttctagttttgcagaaatgaatgaagctcttagtcttctgtatcctgaaagt
cgcacagctctgcccagcgaaagctttagagcattttcaacgatcatgtgtggtcacccc
aaaattggcggagaacgcatcccgtcgctcaactggtatgaagacaataacttcaagtcg
ttactgggcataaacggcacagaggatgaggtgctcgacagcaacaacaagacgacacct
ttctgtagaagtttgattcaaagtctggagtcaaatcctctgtctcgcatcgtatggcga
ggaattaaacctctgttcattggaaaactgctgtacacaccggacactcctgcagtccga
caaatcatgaaggaggtgaacaaaacgtttgaagaccttcagattcttcaggatctaaat
gatgcctggatagaagtgggaccacaaatcaagaactacatggagaccagtgtggagatt
cggctgctgcaggatttgctgaggcgtccagaaattgctgttatggttaatatgcgtttg
gaaaacaccacctggacggcctcacggctcgctcgtttcctctccacaccctcgccggac
aacctgaggaaacctgaagcaccactgacctggttggacgtctacaataacattggaagc
actatcggcattcttgcccaagtcaccaagtgtttcagtttggacaaactggaggggctg
ggcacagagggccagctgattgacagagctctggagctactagaggacaggcagttttgg
gcaggtgtggttttcctgctgcccaacacgtcctcatcggagctcccgccccacatcacc
tacaaaattcgaatggacattgatgatgtgacccggaccaacaagattaaggacaggttt
tgggatcctggtccagctgcagacccattcaatgacatgcgctatatttggggcggtttt
gtctatattcaggacctggttgagagagctgtgaactatgttttaacgggagttaaacag
accaccggcatctacatccagcagatgccctacccctgttatgtggacgatgtgttcctt
cgagtgctcaaccgctccttacctctcttcatgactctggcatggatctacacggtggcc
atgattattaaaggcatggtgtatgagaaggaggcgaggctgaaggaaaccatgaggata
atgggtctcagcacaggaacactgtggctcagctggttcatcagcagcttggtccccttc
ctgatttctgctgtgcttcttattggtctgctcaagtggggcgatatattgccttacagc
gaccccactattgtcttttttttcctcatggcatttgccactgctaccatcatgcagtgt
ttcctcatcagcacctttttctccaaagccaacctagctgctgcctgtggagggctcatc
tacttcagcctctatctgccctacgtgctgtgtgtcgcctggcgagaccacctcaccttc
acacacagggtcctggctagtttcctgtctcctgtggcctttggttttggctgtgagtat
ttctcccagtatgaggagcaaggcgtggggatccagtggtacaacctgcgggacagccct
gtggaaggggacacgtacagctttaccacctccataaatatgctttacgtggatgccttt
atctacgctgctgcagcctggtacattgaagcagtgtttcctggtcagtatggcatcccc
aggccttggtacttcatcttccagctcaacttctggggtgggattcctttagaagtaggc
atgcccatcccaccggcacctgcagaccaggatgaagatcacattgaaacagaacccaat
aatatgaatcttggagtgaacattaaaaacttggtgaaaatctacaagaagggcgggaaa
atggctgtcaaccatctcaacctgaagttttatgaggggcagatcacttccttccttggc
cacaatggagctggcaaaaccaccaccatatccgtcctaactgggctgttccctcccacc
tctgggactgtgtacatcaagggtatggacatccgctatgacatggacatcatccgaaag
acattgggggtgtgtccacagcacaatgtcctctttgacatgctcacagtggaggagcat
gtgtggttttatggttgtctgaagggcctgtctgaagaaaaggtgatggctgaaattagc
gttttgctagctgacgtcggccttttgcacaaacggcatgatcagaccaaaaacctctct
ggtggcatgcagagaaagctgtctgtcgcgatcgcttttgttgggggctccaaagtggtt
atcctggacgagcccacagctggcgtcgatccttactcccgcagagggatctgggatctg
ttgctcaaatatcgtaaagaccgaaccatcattctgtctactcactacatggatgaggct
gagctgctaagtgaccggattgccatcatctccaaggggaagctctgctgctgcggatcg
ccgctctttctcaaatccaagctgggatctggttactatctgactgtggtgaagagggaa
gaaataagcaccagcactcccagtaattccagtatctgcaccagtgccagcaccagcacc
accaggctccctccttttgtaaaggacagtgagtcatcactgagtgaagacactggactg
ggaagtgaggagagcagctcctacctggcagccttgctggcgctggtgcagcagcacgtc
cccggagcgaggttagtggaggagtctaaaagagaagctgtgatcaatgtaccgcaagca
gccgccaaggatggcagtctggctgtcttcctttccgaactggaccagaggcttccagag
ctgggcatcagcagctacggcctgtcagatagcacactagaagagatctttcttcgggtg
gcggaagaaacgggtgtggatgctgatccagcttcgcagcagccaacagaaccgtccagt
ggccagcggccatcagtacaaaaagatgaggatcaacctgctgaagaaccagaatcagga
aggaaaagggctcgtaagaaagaaccacaggaaacggatctactgagcggagatggccaa
ggtttggtgcccctgacaggctggtggctgacatggcagcagctcagagctctcttcgtc
aaacgctggctttacgctcggaggagccgcagagggctttttgcgcagatagttctgcct
gctgtgtttgtgctgatcgctctgctcttcagcctcatcgttcctccattcgggaagtac
cccgccctggagttgcagccctggatgtacggagagcagtacaccttcttcagcaacgat
gctcctggaaacccagctatggaaaacctgctggaagctttgctagaccagccaggtttt
ggcacaaggtgcatggagagagaggaggaggacaacagcacgagtcctcagtgtgacgct
gagaggggtggccccttcatccggcctcagatatcgttctccacctggcagatgctgaat
cgagggaactggagcagagacagcccttcaccagaatgtcagtgcagcacggaggagacc
cgccggatgcttccagagtgcccggacggcgctggtgggattcctcctcctcagatgaag
agagggactggagatattcttcagaatctgacaaagtataacatctcagattacctggtg
aagacctactcgcaaatcctgaagaaaagcctaaaaaccaagaagtgggtgaacgaattc
agatatggaggcttctctcttggaggcaggaacacccagaacgtatctcaggtccagcat
cttcaagactctgtcatggccatcagaactcgttaccaagtctctcagaacagttcactg
gatcaactgctaaagaagcttccagagtttttgggaggaatgcacagtgaaaacaatgtc
aaggtgtggtataacaacaagggctggcacgccatggtgtcatttgtcaacgtgatgaat
aacgggctgctgagagcgagtctgccgccaggaccagagaggaggagacatggcatcact
gtttataatcacccactcaacctcaccaaggagcaacttactgagatagcaatgatgacc
acatcagtggacgttttggtttccatttgtgtggtcttcgccatgtcctttgtgccggcc
agttttgtccttttcctgattgaggagcgagtcagtaaagcaaaacatttgcagtttgtc
agcggggtcaaaccaatcctctactggttgtccaacttcgtctgggacatgcttaactat
tctgtcccagccatgatggttgtgctgatcttcatcagttttcagcagcagtcgtacgtc
tccgagaccaacctgccggctcttatccttctgctactcttctacgggtggtccataact
ccactgatgtacccagcatcttttgttttctccgtaccaagcacagcttatgtggttctg
acctccgtcaacctttttattggcattaacgggagcatcgccacctttgtcttggagttg
gttgtagatgagcatctgaacgaggtcaacaggatcttaaagaaagtgtttttgattttc
ccacatttctgcctgggacgaggtcttattgacatggctaaaaaccaagctatggcagac
gccttccagagactgggaagcaaacagactcttgaccctcttcagtgggactttgtgggg
aagaatctgtttgcgatggcagctgaaggtgttatctttttcatcttcaccatactcctg
cagtataagtttttcatttacttcaggccgtggtggaacaatcctcagcttcctcccctt
ggtccagaggatgaagacgtggcgagagagcgtgagagagtgaaaagtggcaaggcccaa
tctgaaatcctcaccatgatagatctgagcaaggtttataaagcaggcaaaaagccagct
gtggatcgactttgcctcgggattccccgcagtgagtgtttcggcctgctcggggtgaac
ggagcaggaaagacgtccacatttcgtatgctgacgggagatacgcccatcacacacgga
gaggctttcctcagccagcacagtgtgcagacagagatggagcgtgtccaccagttgatg
ggttactgtccacagtttgatgccatcagtgatctgctgacaggtcgggaacatcttgag
ctttacgctcgcttgaggggggtgccagaggagtctgttactaaggtggctcagtggggg
gtgaagaagctgggtttgactcagtatgcagagcaggcggctggaggatacagtggaggc
aacaagaggaaactttccacagctatttccctcattggggctccccctgttatatttctg
gatgagcctaccactggaatggacccaaaagccaaaagatttttgtggaactgcatcctt
agtgtcacaaaagaaggccgagctgtcatactcacctcccacagtatggaagagtgtgag
gctctttgcacaagaatggccatcatggtgaacggcagatttcagtgtctggggtcggtg
cagcacctgaagaatcgatttggagatggatacaccatcatcctccgtctggcggacacc
aagttggacgctgactcctgtccagttgacacctacatgaggacgtcttttcccatcatt
gagctgaaggagagacataagagcgtgctgcagtaccagctgccatcacacgcttgctgc
ctggcccgcgtctttgatgttctagccaacaactacgaggagctcggcatcgttgacttc
tccatctcgcagaccaccctggatcaggtgtttgtcagctttgcaaaggaacagactgat
gacgactgtctcacagatgtggttgccgataacggtgcagcacggctaaaccttcccacc
agaataaatcctcccatcatccagtctcaacagcccacaaaacctcgtcagcagaggaaa
tcttcacagcttccagccaaagcacccaaaagcgatccaaaaggaagcaaaccaaagacg
gcaaaagccagaaagatccgttctaacggggaaacgagcagcagtgtgcctatgagcaga
ttacctcaggcagaggagaagggtccagagtcggacagcagtaacggtggagttcagagg
gagtccagcaaagctcacaggtcaaaacacagagatgagagctccagcaaagatcctgct
acgctctttatagtcggcaccaattcacaagaaagctcactgtaa
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integrated database retrieval system
