Girardinichthys multiradiatus (darkedged splitfin): 124874509
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Entry
124874509 CDS
T08099
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03320
PPAR signaling pathway
gmu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124874509 (rxrgb)
03320 PPAR signaling pathway
124874509 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124874509 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmu03310
]
124874509 (rxrgb)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
124874509 (rxrgb)
Nuclear receptors [BR:
gmu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
124874509 (rxrgb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
124874509
NCBI-ProteinID:
XP_047231850
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Position
9:complement(29278304..29322359)
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AA seq
476 aa
AA seq
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MDSNDPYLHLSMWHPISLPETGGSPRRKMDCDYYSAGAMSAGHTHPPSMAGMVGHPSVIS
TSRPLPSPMSTLGSPMNGLASPYPVITSSLGSPSMPLQSNPNMNFGPISSPQMNSMNSVS
SSEDIKPPPGLQSLGNLNYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTV
RKDLTYTCRDNKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVEST
SSFNEDMPVEKILDAEMAVEPKTETYNDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRI
PHFSELPLDDQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIF
DRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNPSEVEGLREKVYASLESYTKQ
KYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaatgatccatatttacacctcagcatgtggcaccccatctctttacctgaa
accggaggcagccctaggaggaaaatggattgtgattactattcggcaggtgcaatgagt
gcaggccacacacatcccccatcaatggctggcatggtgggccacccctcagttatcagc
acttccaggcccctaccatcccccatgtccaccttgggctcaccgatgaacggtctggca
tcgccttatcctgtcatcacgtcgtctctgggatcaccctccatgcctcttcagtctaat
cccaacatgaactttggaccaatcagcagtccacagatgaactcaatgaacagtgttagc
agttcggaggacatcaagcctccaccgggcctgcagtctttggggaacctcaactaccaa
tgtacgagcccgggggggatgtcaaaacacatctgtgccatttgcggggatcgctcttca
gggaagcactacggtgtgtacagctgtgagggctgcaaaggcttcttcaagcgcacagtc
cgtaaagatctcacgtacacgtgtcgagacaacaaagagtgcctgatagacaagcgccag
aggaaccgctgccagtactgccgctatcagaagtgcctggccatgggcatgaagagagaa
gccgtgcaggaagagaggcagcgcgggaaggagcgtggcgagaacgaggtggaatccacc
agcagtttcaacgaggacatgccagtggaaaagatcctggatgccgagatggccgtggag
cccaaaacagagacgtacaacgacggcagcccgggaaactcgaccaacgacccggtcacc
aatatctgccaggcagcggacaagcaactcttcaccttggtggagtgggccaaaaggatc
ccacacttctccgagctccctctagatgaccaggtcatcctgctccgagcaggctggaat
gagctgctcattgcttctttctcgcatcgctcggtcacggttaaagacggcatcctgttg
gctacaggtctgcacgtccacagaagtagcgcccacagtgcgggagtgggatccatcttt
gatagagtactcacagagttggtatcaaaaatgaaagatatgcagatggataagacagag
ctgggctgtctgcgggctatcgttctgttcaacccagatgcaaaaggtttgtcgaacccg
tcagaggtggaggggctgagagaaaaagtttacgcttctttggagtcgtatacaaaacag
aagtaccccgaccaacctggcaggtttgccaaactgctgctacgcctgccggctctacgc
tccatcggcctcaagtgtctggagcatctgttcttcttcaagctaatcggagacacgccc
atcgacaccttcctgatggagatgctggaggcgccgcatcagatcacatga
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