Girardinichthys multiradiatus (darkedged splitfin): 124874551
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Entry
124874551 CDS
T08099
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124874551 (sned1)
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
124874551 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
MAGP
Ig_DSCAM-DSCAML_C
EGF_MSP1_1
cEGF
Motif
Other DBs
NCBI-GeneID:
124874551
NCBI-ProteinID:
XP_047231908
LinkDB
All DBs
Position
9:complement(41175149..41224708)
Genome browser
AA seq
1342 aa
AA seq
DB search
MLLVLQAILSCFCALLPRVEPAVSLEDFYPFGPDKGDKQTIAQDDGGSGLQEISVAFPFF
GDKHSGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRLAGSVFYRESQD
PSILRRASGDVRTYFTEFPDFNATWVLISTWHQVTFFGGNSQTPVNTFQVVLITDGEFSF
TIFQYNNITWTTGRHATSGGNLVGLGGIAAQAGFNAGDGQRYFNIPSSRTADVVSVEETT
NVGYPGRWVFRIDDANVEVGGCNSASVCPHLRPCLNGGQCIDDCITGNPSFTCSCLAGFT
GRWCQINVNECASNPCQNSGSCKDQINGFICECPTGYTGIHCQTDIDECEDRPCLNNASC
VQGTGHFTCVCEPGYTGVRCETDINECESQPCLNGGECIDLVTSFTCACPATFTGILCET
ELVNSTDPYNQTAECLCQNGGICVGINGTCECPSGYTGAVCQLGVTQTLCSHSRTCPDGS
PCLEYGGTYLCTCHTGVESDHMDFYPVQPQSVCDSSPCLNGGYCYERDGGYTCECRYGYS
GKHCEKVRLNTCASSPCRNGGSCKEEGGSYRCVCPYRFTGKHCEVGKPDPCSSTPCLNGG
TCFHYLGKYKCECADEYSGKDCQISRSSLHPSAELGCGPPPHVKHAEVQFSSTTPGSIAA
YVCHSGFTSVPRATQSLCGIQGEWSQPPVCKEIIECLAQPCLNGGSCQNKIGSYKCVCKD
GFSGKRCQIDANECQSEPCMNKGTCEDQPGSYLCHCPQGFKGQNCEIEQVGCESGPCLNG
GVCRGYRQYYVCTCKDGFFGERCQMLEDPCVLKPCGTRGSCWSDRRGNYNCVCKVGLTGK
DCEKDLLPLSGLHVLRVEENEVELRWDQLEHSHRLISMFAVTYAPLGHSNPKTDYLDKQR
STHVLRDLVPGMLYNISTVSIKLKAYGNDTSQPATALIRTRPQRVEKLQLVNVSSSQVWL
SWLVQAAHNGAISRVHVSLMPSDGTEGLNVALNASITEHTFSSLEAGHMYTVDVLTQSGI
RPDEFPSTSHSGGPLQFWTRPYPPQNLSLSHVTPNAALITWSRHPRHIPDGYVINVTRGL
TTRSRFLPNGKLGSYTLRELTPGQHYYVALMSVKNTGQEQIHSIPQHLSFTTLPIQVRHG
RREWPTGTGLGTQTGRIFPTSHPQDLGGTSDIKNSEELFRYTELVDRRGKITTKFSHLTP
KVIRHRTRHPPIRLEKMEETTNKISLALEIEEKASRAQPELPQDCRSLSCQNGGTCVNER
GSIMCNCVAGFKGTQCELLCQRVPHPCTRLYSETKSIPVWEGGVCHYLYKRTYKVQQDIC
YREICEPVLSKKSQTRRTNRHQ
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgctgcaagccatcttgtcctgcttctgcgccctgctgcccagggtggaa
cctgctgtgtccttggaggacttttacccttttggtcctgacaagggggacaagcagacc
atcgctcaggatgatggaggctccggtctccaggaaatctctgtggctttcccattcttt
ggtgacaaacactcgggactctacgtgaacaacaatggtcttgtgtctttcctgagggag
gtctctcagtttacacctgtagcttttccaattgctggggacagaagggttgtggcacca
ttctgggctgatgtggacaaccgtctagcagggagtgtcttctacagagagagccaggac
ccttccatcttgaggagggcttcaggtgatgtcaggacatacttcacagagttccctgac
ttcaacgcaacatgggtgctcatttctacttggcatcaagttactttctttggaggaaac
tcccaaacaccggttaatactttccaagtggtgcttattacagatggagagttttccttt
accatattccagtacaataacatcacctggacaacaggaaggcatgccaccagtggagga
aaccttgttgggctgggagggattgcagcacaggcaggttttaacgctggtgatggacag
cgctatttcaacatccctagctctcgcacagctgatgtggtcagtgtagaggaaacaacc
aatgtaggatacccaggcagatgggtcttcagaatagatgatgcaaatgtggaagtgggg
ggctgcaactctgcctcagtgtgtccacacctgcgtccgtgcctgaatggaggccagtgc
atcgatgactgtattacaggcaacccctccttcacttgctcctgcttggctggattcact
ggccgctggtgccaaatcaatgtcaacgagtgtgcttcaaatccatgccagaatagtggg
agttgtaaagatcagattaatggtttcatctgcgagtgtcctactggatacacagggatt
cactgtcaaacagacattgacgagtgtgaggacaggccatgccttaacaacgcgtcgtgt
gtacaaggcactggccatttcacctgtgtgtgtgagccaggttacactggggttcgctgt
gagacagacataaatgaatgtgaatcccagccatgtctgaatggaggagaatgcatcgat
ctggtgaccagcttcacctgtgcgtgtcctgctacattcactggaatcttatgtgaaaca
gagttggtgaattccactgatccatacaaccaaacagcagaatgtctttgccagaacggg
ggcatctgtgtgggcatcaatggaacctgtgaatgcccttcaggctacactggagctgtc
tgtcagttaggagtaactcagaccctgtgcagtcacagcagaacatgtcctgatggaagt
ccctgtttggagtatggaggaacctacctatgtacatgtcatactggagtagagtctgat
catatggacttttaccctgtacagccccaatcggtttgcgactcctcgccttgtctaaat
ggcgggtactgctacgaacgagatggaggctacacctgcgagtgcagatatggatactct
gggaaacattgtgaaaaagttaggcttaatacatgtgcttcaagcccctgtcgtaatgga
ggctcttgtaaggaagagggggggagctacagatgtgtgtgtccgtacagattcactgga
aaacactgcgaagtggggaagccagacccctgttcctccaccccctgtctaaatggtgga
acatgtttccactacttgggaaagtataaatgtgaatgcgctgatgaatacagcggaaaa
gactgtcaaataagcaggagctcattacatccctctgcagagctgggatgtgggccgccc
ccacatgtcaaacacgcggaggtccagttctcctcgacaacaccaggctccatcgctgcg
tatgtttgtcattcagggttcacctctgtgcccagagccactcagagcctttgcggcatt
cagggagaatggagccagccccccgtttgtaaggagattattgagtgcctagcacagcct
tgccttaatggcggttcttgtcaaaataagattgggtcctataagtgtgtctgcaaggat
ggctttagtggaaaacgctgtcagattgatgcaaatgaatgccagtcagagccctgcatg
aacaagggaacatgtgaggatcagcctggttcctacttgtgtcactgtccccaaggcttc
aaaggccaaaactgtgaaatagagcaagttggttgtgagtccggcccctgtctgaacgga
ggcgtgtgtcggggttacagacagtattatgtgtgcacgtgtaaagacggtttctttggg
gagcgatgccagatgttggaggacccatgtgtgctgaaaccttgtggaacgcgtggcagc
tgctggagtgacaggagaggaaactacaattgtgtctgcaaagtaggcctcacaggcaaa
gactgcgagaaagacctgttacctctatctgggctccatgtactgcgtgtggaggaaaat
gaggtggaactgcgctgggatcagctagaacattcccacagattgatcagcatgtttgct
gtaacctacgctcccctgggccacagcaaccccaaaacagactacctggacaagcagcgg
tcgactcatgttttgcgtgacctggttcctggcatgctgtacaacatttctactgtctcc
atcaaactaaaagcctatggcaacgacacaagccaacctgccactgcactaattcgcact
agaccgcagcgggtagaaaagctgcagctggtcaatgtgtcctcctcccaggtttggcta
agctggctggtccaggctgctcataatggggcgatcagtagggtgcatgtgtctctaatg
ccttcagatgggactgagggtctcaatgttgcactcaacgcaagcatcactgagcacact
ttcagttcattagaagctggtcatatgtatacagtggatgttttgactcaaagtgggatc
agaccagatgagtttccttctaccagtcactcaggaggacctctacaattctggacaagg
ccttatcccccacagaatctctccctgtctcatgtgacccctaatgcagcactaatcaca
tggagtcgccatccaagacacatcccagatggctatgtgatcaacgtaacccgtggtctg
actaccaggagtcgcttccttcctaatgggaaattaggatcgtatacgctccgtgagctg
acgccgggacagcactactatgtggctctaatgtctgtcaaaaacacaggacaagaacag
attcacagcataccacagcacttatcttttactaccttgccaatacaggtcagacatgga
aggagggagtggcccacaggaactggactggggacccagactggacgcatatttcccaca
tctcaccctcaagacctgggtggcacctctgacataaagaactcagaggaactgttcaga
tacactgagctggttgacagaagggggaagataacaactaagttttcacatttaactcca
aaagtaatccgacatcgtactagacatccacctatcagattggaaaagatggaagaaaca
acaaacaaaattagccttgcattagagattgaagaaaaagcttcgagagcacagcctgag
ttgccccaggactgccgcagtctgtcctgccagaatggaggtacttgtgtgaacgaaagg
ggctccatcatgtgcaactgtgtggcagggttcaagggcacgcagtgtgaactgttgtgc
cagcgagtaccccacccatgtacccgactctactctgaaactaaaagcatacctgtctgg
gagggcggagtgtgccactatctgtacaaaaggacatataaagtacagcaggacatctgt
taccgggagatttgtgagccggtgctgtcaaagaaaagtcaaaccagaagaacaaacaga
caccagtaa
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