Girardinichthys multiradiatus (darkedged splitfin): 124874574
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Entry
124874574 CDS
T08099
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124874574 (frem1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gmu04091
]
124874574 (frem1b)
Lectins [BR:
gmu04091
]
C-Type lectins
Lecticans
124874574 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
124874574
NCBI-ProteinID:
XP_047231943
LinkDB
All DBs
Position
9:complement(609960..680466)
Genome browser
AA seq
2085 aa
AA seq
DB search
MVSIGSVLVLPSLMVLAVSSHSLVQVNSGVRVHRGHSVSITESDFKIQVDPSSSCKVEVV
VNEPVTQRVGKLTPQMFDCSFLKDEVRYIHNGSPLLDDDTVLLRVYRFTSSDMQVEMVVL
RVQVLDGGPNVVELGSTLLVVPQFFGLSNTINSTVLRIRTPGDLVCTVRLMTAETKVPMV
GRLVHEEDSIQRTGRQVQEFCPGNKPCLHHATEVQFLKTSCQHFLSSGLKYQHLSPPSLQ
TDYIPIQVELREQMTRKLLESQALWLPVVIHGAVQNQPPKADFMASSILEVDQFILTPLS
TATLDATDPETPQDRLVFNVTAPPSEGYITHLEDHTKLIRSFTWLDLHDMKVAYQPPNSS
QSLRQNLQVPRRPREQWSVISNQVEFQVIDGSFTSSQPILVYLSIRASETDAPRVSWNMG
LELLEGQSRPITWKELQVVDKDNIDAVYLVAVDGPVHGWLSVRGEKAFMFHVRDLKEGLV
IYHHSDSDSTRDHIVFRISDGRHSIRHKFPINILPKDDSPPFLVNNVLVEVQEGGSVRLE
EYMLLASDLDSSDDFIRYQTVSSPHAGQLTRRSSVHEIAIPVDSFLQRDLIQGQIYYQHS
GDEVFEDSFDIMLSDCHQPPNLSQTYTVVVQVFPVKDQLPVEVPGTIRSLTVRETDVVYI
SQSQLHFTDKENPEADLTYIIMQTCFSPLQPGLMDAGRLFYTDSTSSMKKDHMVPVLKSF
TQSAVNHMKVAFMPPVEDIGPDPLFVQFVFSVSDQHGGTISGLVFNITVTPDDNLSPEAF
TNLLRVEEGGRSFVTEEHLLVQDQDSPEERLRVEVQRIARHGRLELQGGVLLQGGVFRLS
DLRGLRLSYIHDDSETSYDEVGLKVMDGLNSVDVVLQIQVLPINDEPPQLGGGLRDELRC
EEGGRVQVTVDYLSATDQDSDDSRLTYMLARSPGRGELQRAGMMTDKFSQQELLQGHIYY
VHSGAEIGPEPEFDTVTLIISDGEAGVTDNCCHGDAPLPPVPLHGTLPVYDLNITILPVN
NKVPQVTLGESLLLVDEGSRACLCGGVLGVSDPDSPPEELTFYLETLPLHGFLENLQPIP
GSEKINVGQPIESFSLTNLTSGLINYVQSEHRGVEPTVDHMAISVSDGLHSSAPVTFYII
INPTNDEPPSLLLANFTVKEGGVRDLTPSILDASDLDNPPDLLTFRVERTPAHGILVHAP
YREVGAELLQRSHGVSSFTLQELRQGMKILYQHDDTESLEDVVLLQLTDGVHSVQGMARV
TVLPVNDNKPCLIRNAGLDLDSGDHRVISSMVLEAADLDTAPDHVFYFISAAPRFGKLLL
KTESSWNELSAGQNFTQEQVEQNRLWYHHRASNTGFRGHDSFRFILSDVDSESLTQRFLI
SIRTVDRGEIVLHTKAVHLREGERVVLITDILLALDSAGRPEELVFTVSTPPQHGLIHAI
QQPGVPLISFTQLDVAAHRVCYTHNNDHDSETDSFSFVVTNGASSHSGMLLFTIEHGDRI
PPTLKVNAGLHLQDRSTATITPDLLQLTDLDTATSNLTYLITLLPRYGKLLLKGTGLPSP
PRFFQTDIDHLDLAYRHNPGSPAELDQFYFLPSDGTNKGYLEFGQLREEPAVFNIQVEKV
DRISPSLSHTESPSTIVDLGAGRYGIFITSRHLQGSDPDSPLEQLEFFIIRPPQFGFLEN
AATGASISRRFTQQDLDQRSVLYILPVDVNVTADSFQFRLVDPAGNQTPPLMLELFWSQV
QLSASCYRTCETSGSLQIQIQRSGRSVDPAYVSIQVEEGSAKPGRDFIHSSATLIQFDTG
VNVKSWNVFLVDDGLEENHETFSITLKNPQNTILGQRNSASVEIIDPRRGRCDPEDLKVA
SPPFLPDPSPSPRPEDEEDEDPVTDIEAELLWETQPDPPRGDVPDHRPHLDYEEVEPQDQ
MMPVYRRIHTSKGHLVESHLGSTSWNPEGRKVVSSHSNLCPEGWTFYRRHCHIVCSSVAS
WASADRTCSLLFNSSLSIVRSRKDISWMWRFAGKKSFWIGGSGDQDHWMWADRHTARLSG
VPLGRDDADISSDCVLVENPRRWISTNCSAETQHSFICSSETVPH
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atggtctccattggatcagttctggtcctgccctccctaatggttttggctgtcagctcc
cactctctggtgcaggtaaactcaggtgtgcgggtccaccgaggccactcagtttccatc
acggagtcagattttaagatccaagtggatccaagctccagttgtaaggtggaggtggtt
gtaaatgagccggtgacccagagggttgggaagttgactccacagatgtttgactgcagt
tttctgaaggatgaagtccgatatatccacaacgggagtcctctgctggacgatgacacg
gtgctgctccgagtgtataggttcacatcctcagacatgcaggtggagatggtggtcctc
agagtccaggtgctggatgggggtcccaatgtggtggagctgggcagcactctgttggtg
gttcctcagttctttggtttgtccaacaccataaacagcaccgtgctgaggatcaggact
ccaggggacctggtctgtacggtcaggctgatgactgcagagaccaaggtcccgatggtg
ggtcggctggtccacgaggaggactccatccaacggacaggccgtcaggttcaggaattc
tgtcctggaaacaaaccatgtctccaccacgccactgaggtccagtttcttaaaaccagc
tgccagcacttcctgagttccggcctcaagtaccagcacctcagtcctccgtcccttcag
actgactacatcccaatccaggtggagctgagggagcagatgaccaggaagctgctggag
tcacaggctctgtggctgccggttgtgatccatggcgccgtgcagaatcagccccccaag
gctgacttcatggcctcctccatcctggaggtggaccagtttatcctcacccctctcagc
accgccacactggacgccacagacccggaaaccccacaggaccggctggtgtttaacgtg
acagcccccccttcagagggatacatcacacacctggaggaccacaccaaactgatccgg
tccttcacgtggctggacctgcatgacatgaaggtggcctaccagccacccaacagcagc
cagagtctccgccagaacctccaggtaccacggagacccagagagcagtggtcagtgatc
agtaatcaggtggagttccaggtgatagacggatcctttacgagcagccagcccatccta
gtctacctgtctatcagggcgtcagaaacagacgcacctagagtctcctggaacatgggt
ctggagctgctggagggtcagtctcgaccaatcacgtggaaggagctgcaggtcgttgac
aaggacaatatcgatgccgtttacctggtggccgtggacggaccagtgcatggctggctg
agtgtcagaggtgagaaggccttcatgttccatgtgcgggacctgaaggagggcttggta
atctaccaccactccgacagcgactccactcgcgaccatatcgtattccgcatcagcgat
ggccgtcacagcatccgacacaagttccccatcaatatcctgcccaaggacgactctcca
cccttcctcgtcaacaacgtgctggtggaggtgcaggagggcggctccgtgcggctggag
gaatacatgttgctggcatctgacctggattcaagtgatgacttcatccggtaccagaca
gtgtcctctccacacgcaggtcagctgaccaggaggagctccgtccatgaaatcgctatt
cctgtggacagcttcctacagagagacctgatccaaggtcagatctactaccaacactcc
ggagacgaggtgtttgaggattccttcgacatcatgctctctgactgccaccagccgcca
aatctgtcacagacatacacggtggttgtccaggtgtttccggtgaaggaccagctgccg
gtggaggttcctggcaccatccgctctctgaccgtcagggagacagacgtggtttacatc
tcgcagtctcagctgcacttcacagacaaagaaaacccggaagctgacctaacctacata
attatgcagacctgcttcagcccgctgcagcctgggctgatggatgcaggacgtcttttc
tacactgacagcaccagctccatgaagaaggaccacatggtgccagtgctgaagtccttc
actcagagcgctgtgaaccacatgaaagtggccttcatgcctcctgtggaggacatcggt
cctgacccgctgtttgtccagtttgtgttctctgtcagcgaccaacacggtggcaccatc
tctggtctggtcttcaacatcaccgtgacccctgatgacaacctttcacctgaggccttc
accaacctgctgcgggtggaggagggcgggcggtcctttgtgacagaggagcacctcctg
gtccaggaccaggacagtcctgaggagaggttgagggtggaggttcagaggatagctcgt
catggccggctggagctgcaggggggagttctgctgcaaggaggtgtgttcaggcttagt
gacctgagaggactgcggctcagctacatccatgatgactctgagaccagttatgatgaa
gtgggtctgaaggtgatggatggtctaaactctgtggatgttgtgctgcagatccaggtc
ctgccgataaatgacgagcccccccagctgggtggaggtctgcgggatgagctgcgctgt
gaggaaggtgggcgggttcaggtgactgtggattatctgtcagccacggaccaggacagt
gacgactccaggctgacctacatgttggcccggagtcctggtagaggggagctgcagaga
gcgggaatgatgacggataaattctcccagcaggagctgctgcagggacacatctactac
gtccactctggtgcagagatcggacctgagccagagtttgacacggtcaccctcattatc
tctgacggagaggctggagtgacagacaactgttgccatggagatgccccactcccacct
gttccactgcatggcacacttcctgtttatgacctgaacatcaccatccttcctgtaaac
aacaaggttcctcaagtcactctgggggagtccttgctgctggtggatgaaggctccagg
gcctgtttgtgtgggggggttcttggggtctcagacccagacagtcccccggaggaactg
actttttacctggagactctgcctcttcatggcttcctggagaacttgcagcccatccca
ggatcagagaagatcaacgtgggacaaccaatagaatctttcagcctcacaaacctgacc
tccggtctcatcaattacgtccagtcagagcacagaggggtggagccaactgtggaccac
atggccatcagtgtgagcgacgggctgcacagctccgcacctgtcaccttctacatcatc
atcaacccgaccaatgacgagccgccttcgctgctgctggctaactttactgtgaaggag
ggcggggtcagggatctgactccatccattctggacgcctccgacctggacaaccccccg
gacctcctgacctttagagtggagcgcacaccggctcacggcatcctggtacacgctcca
tacagggaggtgggagctgagttgctgcagaggagccacggagtctcgtccttcaccctg
caggagctccgacagggcatgaagatcctgtaccagcatgatgacacagaaagcctggag
gacgtcgtgctgctgcagctgacagatggagtacactcagtgcaggggatggctcgggtc
acagtgctgccggtcaacgacaacaagccatgcctgatcaggaatgctgggctggacctg
gactctggggaccacagagtgatctccagcatggttctggaagctgcagatctggacaca
gctccagaccatgtgttctacttcatcagtgctgcaccaagatttggaaaacttctgctg
aagacagaatcaagctggaatgagctttcagctggtcagaacttcactcaagaacaggta
gagcagaaccggctgtggtaccatcacagagccagcaacactgggttcagaggtcacgac
agcttccgattcatcttgagcgacgtggacagcgagtctctgactcagagatttttgatc
tccatccgtacagtggacagaggtgagatcgtcctgcacaccaaggccgtccacctgagg
gagggggagcgggttgtcctgatcaccgacatcttgctggcgctggactctgcgggtcga
cctgaggagctggtcttcaccgtgtccaccccgccccaacatggcctcatccacgccatc
cagcagcccggggtcccgctgattagcttcactcagctggacgtggcggcccaccgagtg
tgctacactcacaacaacgaccacgactcggagaccgattcgttcagttttgttgtcaca
aatggcgcctcatcccacagcggcatgctcctcttcaccatcgaacacggtgaccggatc
ccaccaaccttgaaagtcaacgctggcctccatctgcaggataggtccactgccaccatt
acccctgaccttctgcagctcaccgacctggacaccgccacctccaacctgacctacctc
atcaccctgctgcccaggtacggaaagctgctgctgaagggaaccggactaccttcgcca
cccaggttcttccagactgacattgaccacctggacctggcttaccggcacaaccctggc
agcccggcagagctagaccagttttattttctgccaagcgatggaaccaacaaaggttac
ctggagtttggccagttaagggaggagcctgcagtatttaacatccaggtggaaaaggtg
gacaggatttctcccagtctaagccacacggagagtcccagtaccattgtggatcttggc
gctggccgttatggtatcttcataacgagcagacacctgcagggctccgacccagacagc
ccactggaacagctggagttctttatcatcagaccgccccaatttggattcctggagaat
gcagccacaggagcatccatcagtcgccgtttcacccagcaggatttggatcagcgctcc
gtcctctacatccttccagttgatgtgaatgtaactgccgacagtttccagttccgtctc
gtggatccggcaggaaaccaaactccacctctgatgctggagctgttctggtcccaggtc
cagctatcggcaagctgctatagaacctgtgaaacttcaggatctctgcagatacagatc
cagcgtagcgggagaagtgtcgacccagcttatgtctccatccaggtggaggaaggatcg
gccaaaccgggcagggatttcatccacagctcagccactctgatccagtttgacacgggt
gtgaacgtaaagagctggaatgttttcctggtggatgatggtctggaggagaaccacgag
accttcagcatcactctgaaaaaccctcagaacaccatcttgggtcagagaaattcagcc
tctgtcgagatcatcgacccccgacgaggacgctgtgatccagaggacctcaaggtagcc
tctcctccttttctccctgatccttctccttctcctcgtcctgaggacgaagaggatgaa
gacccagtcactgacatcgaggcagagcttctttgggagactcagccagaccctcccaga
ggagacgtcccagaccaccggcctcacctggactatgaagaggtagagccacaggaccag
atgatgcctgtatacagacgcatccacacctccaagggtcacctagtggaatcacacctt
ggtagcacatcttggaaccctgaaggcaggaaggtggtgagctcccacagcaacttgtgt
cctgaaggttggaccttctacaggagacactgtcacatagtctgctcatctgtggccagt
tgggccagcgctgacagaacctgctctctgctcttcaacagcagcctgagcatcgtgcgc
tccaggaaagacatcagctggatgtggagatttgcagggaagaagtccttctggatcggt
gggtctggagatcaggaccactggatgtgggcagatcgtcatacagccagactcagcggg
gtgccgctgggacgtgatgatgctgacatcagctcagactgtgtcctggtcgagaacccc
agaagatggatttctaccaactgttcagctgaaactcagcactcatttatctgttcttca
gaaactgttcctcactga
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