Girardinichthys multiradiatus (darkedged splitfin): 124874989
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Entry
124874989 CDS
T08099
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03420
Nucleotide excision repair
gmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124874989 (ercc4)
03460 Fanconi anemia pathway
124874989 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmu03032
]
124874989 (ercc4)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124874989 (ercc4)
DNA replication proteins [BR:
gmu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124874989 (ercc4)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
124874989 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
124874989
NCBI-ProteinID:
XP_047232671
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All DBs
Position
10:complement(1291399..1299061)
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AA seq
902 aa
AA seq
DB search
MAGPLLEFETEMFLSLFESDGLLVAAEGLGIDRILLQFMRVYSEEGSLVLLLNTTTAEQE
YFTEQLRVEGVTHLPRTVTSDVQSAERYKVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKSGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPEVVELHVSLTAAMRAIQSSILDIMSACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKTFGSNSGWLFLDSSTSMFVNARSRVYRIPENKKKLKIGRETEKQKSSSASEL
KRDLVLEKSPKWEVLTEVLEEIEKENKNSQPESGRVLICASDDRTCAQLQQFIKHGSDWL
LNQLYARTIGKRDPAAAAAAAFELESHKKGKGWMKKGGKGKEPAQKRSTKTTKNKSRPSL
TLTQMIGKEESEETGVMGSSEDEDNLMDGDEGKEEQLNLNVSSDAYYGVLKEPLTVIHPL
KGCTDPHSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKANRPGKPLRVYFLIYGGSTEEQ
KYLTALSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNLEPANATTNTRKAGGQEQ
PTEPSSVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSVSDLIGSLQ
SGRLYTQCLSMTRYYRKPVLLIEFDPAKPFSLMARSDFCREISSNDISSKLTLLTLHFPR
LRILWCPSPHATAELFLDLKQGRPQPDASAAQAVTAESDVVGESADLYNPGPYDFLMKMP
GVNAKNSRALIKNAASLADLAQLSQERLAGILGNANNAKMLYEFLHNVADVPAPVQKTKQ
TR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccgctcctggagtttgagaccgagatgtttttgagtctcttcgagtccgac
gggctgctggttgcggcggaggggctggggatagaccgcatcctgctacagttcatgcgg
gtttactccgaggagggcagcctggtccttctcctcaacacaaccacagctgaacaggag
tatttcacagagcagttgcgagtagagggtgtgacccatctgcccaggacggtgaccagt
gatgtccagagtgctgagcgttacaaggtctacactgaaggaggggttctgtttgtcacc
agcagaatcctggtggtggacttcctcactgatcgcatccctgctcaccttatatcaggc
atcctggtgtatcgtgctcataaaattattgaatcgtgtcaggaggcgttcatccttcgt
ttgttcagacagaagaacaagagcggcttcattaaagccttcactgacaaggccacggcc
ttctcctctggcttctgccaggtggagcgtgtcatgagaaacctgtttgtcaagaagctt
tacttgtggccaagattccaagcgtctgtgaacacagcgctagacaggcacaagccagag
gtggtggagctgcatgtgtcattaacggcggctatgagagccatccagagctccatcctg
gacatcatgagtgcctgcctgaaggagctgaaacgctacaatcctactctagaggccgag
gacctgtcactggagaacactctaggaaatgcatttgaaaagacaatccgtcattaccta
gatcccctttggcaccagttaggagcaaaaacaaaagccctggtccaggatctcaaggtt
ctcagggttctccttctctacctcacccagtatgactgtgtcaccttcctcaatctgctc
gagtcactgcgctccagccaaaagaccttcggctccaattcaggctggcttttcctggac
tccagcacctccatgtttgtgaatgcaaggagcagagtgtaccgtatccctgagaacaaa
aagaaactcaaaataggcagagaaacagagaagcagaaatcctcctctgcctcagagctg
aagcgggacctggtgctggagaagagtccaaagtgggaggtcctgaccgaggtgctggag
gagattgaaaaggagaacaagaactctcagcctgaatcaggtcgtgtgctgatttgtgcc
agtgacgaccggacctgtgcgcagttgcagcagttcatcaaacacggctctgattggctg
cttaaccagctttatgcccggacgatcggtaaacgggaccctgctgctgcggcggcggcg
gcctttgaactggaatcacacaagaagggaaaaggttggatgaagaaaggaggcaagggg
aaggagcctgcacagaaaagaagcactaagaccacaaaaaacaaaagcagaccttctctg
accctgacccagatgatagggaaggaggagtctgaagaaacaggagtgatgggtagcagc
gaggatgaagacaatctgatggacggagatgaaggcaaggaagaacagctgaacttaaat
gtttcctctgatgcctattatggcgtccttaaagaaccgctgacagtcatccaccctctg
aaaggctgcaccgacccacatagcctgacccgagtgctgcatgaggtggagcccagcttc
gtggtgctgtatgatgcagaactgagttttgttcgccagctggagatctacaaagctaac
cggcctggaaagcctctcagagtgtacttcctgatctatggaggctccacagaggaacag
aagtatctgacggcgctatcgaaggaaaagaaagcgtttgagcatctgatcagagaaaaa
gcaactatggtcatcccagaggagagagaggggcgggaagacaccaacttagacttagcc
agaaatttagagcctgccaacgccacaactaatacccggaaagcagggggccaggagcag
cccacagagccctccagcgtcatcgtagatatgcgggagttccgcagcgagctgccttcc
ctactgcaccgccgcgggctggacatcgagcccgtcaccctcgaagtgggcgactacatt
ctgacccctgacacctgcgtcgagcgcaagagtgtcagcgacctgattggctcattgcag
agcgggcgcctctacacccagtgcctctccatgacccgctattacagaaaaccggtgctg
ctcatcgagttcgacccagccaagcccttttccttgatggctcggtcggatttctgcaga
gaaatctcatcaaatgacatttcttccaaacttacgttgctcacgctgcatttcccccgg
ctcagaatactgtggtgcccctccccacacgccaccgccgagctcttcctggacctgaag
caaggccgtcctcagcccgacgcttctgcagcccaggcggtcacagctgagtcagacgtg
gtcggtgaatcagcggacctctacaaccctggaccttatgacttcctgatgaagatgcca
ggcgttaatgcaaaaaactccagggcactgataaaaaatgctgccagcctggcagacctg
gcccagctgagtcaggaaaggctagcaggaatacttgggaatgctaataatgctaaaatg
ctgtatgaatttctgcataatgttgcagatgttcctgctcctgtgcagaagaccaaacag
acacgatga
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