Girardinichthys multiradiatus (darkedged splitfin): 124875235
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Entry
124875235 CDS
T08099
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04145
Phagosome
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124875235
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124875235
09144 Cellular community - eukaryotes
04510 Focal adhesion
124875235
09142 Cell motility
04820 Cytoskeleton in muscle cells
124875235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124875235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124875235
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124875235
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Phagocytosis
Opsonins
124875235
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124875235
Exosomal proteins of colorectal cancer cells
124875235
Exosomal proteins of bladder cancer cells
124875235
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124875235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CFP_C
TSP1_ADAMTS
TSP1_CCN
APG6_N
Motif
Other DBs
NCBI-GeneID:
124875235
NCBI-ProteinID:
XP_047233203
LinkDB
All DBs
Position
10:13424142..13458649
Genome browser
AA seq
950 aa
AA seq
DB search
MWPLRDLPWLLIPLCAVAVCAGVDGAKVLNGSGEMCHHPCDELLDLITEIHGLRVVTNNL
LEELERVSKENEEMRISLAELSNDSNRGDGDEEDNYLDRDRDGEVWCVQDRRVYEQGEVW
EVDSCTSCACQDGKVVCQQVLCPPVSCITPSFVDGKCCLVCLENEDGWSPWSDWTHCSVT
CGRGGQQRGRSCNGINGCAGPSLQTRSCSVMTCDRKARADGNWGLWSPWSACTTTCGEGD
ITRVRLCNNPPPSKEGKGCKGYAKETKSCNNTVCPVAGRWTAWGEWSQCSASCGGGLMSR
QRECLNPAPQNGGKPCAGEASDYEACNKQPCPIDLCFLSNPCFPEVKCTSKSDGSWECGH
CPVGLKGNGTHCEDENECEVDGVCFTKCVNTDPGFYCLPCPPRYKGNQLYGIGLQEAMKA
RQVCEPYNPCKENTHTCHQFADCKYLGLASEVLFKCSCAVGFAGDGSVCGEDSDLDGWPN
ERLPCKQNATYHCEQDNCPMLPNSGQEDLDKDGQGDACDPDDDNDNIIDERDNCPLMYNP
RQFDSDRDGVGDSCDNCPFDRNPKQTDSDGNGEGDACSIDIDGDEKLNELDNCPFVYNTD
QRDTDLDGVGDQCDNCPLLHNPLQLDSDSDLVGDLCDNNEDIDEDGHQNSLDNCPYIANS
NQADHDKDGKGDVCDHDDDNDGIPDDRDNCRLVPNTDQLDSDGDGSGDACFDDFDNDNIP
DALDPCPLNQDIGVTDFRKFQVVLLDPKGTTQSDPLWVIRSQGTELLQKANSDPGIALGY
DKFSAVDFSVTFYVNTNRDDDYAGIVFAYQSSRRFYVVMWKQVSQGYWEQRPSKAFATAG
LSIKLVHSSTGPGEYLRNALWHTGNTRHQVRTLWHDPNKIGWKDYTAYRMHLIHRPKTGF
IRVVVYEGRGILADSGAVYDHTLAGGRLGLFVFSQEQVIFSDLRYDCRDN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctctgagagacttgccctggctcttaattcccctgtgtgcagtggctgtgtgt
gcaggtgtagatggtgcaaaggtcctcaatgggtcgggagaaatgtgtcatcatccttgc
gatgagctgttggatttgatcactgagatccacggtctgcgtgtagtgactaataacctg
ctggaagaactggagagagtatcaaaagaaaatgaggagatgcggatatccttggctgag
ctgagtaacgacagcaacagaggcgatggagatgaggaggacaactatctggatagggac
agggacggggaggtgtggtgcgtgcaggatagacgagtgtacgaacagggggaggtctgg
gaggttgacagctgcacctcctgtgcttgccaggatggaaaggtggtctgtcagcaggtt
ctgtgtcccccagtctcctgcattactccgtcctttgtcgatggaaagtgctgcctggtg
tgtcttgaaaatgaagatggttggtctccttggtctgattggacccactgctctgtcacc
tgtgggcgtggggggcagcaacgaggtcgatcctgcaacggcatcaatggctgtgctggg
ccctcgcttcaaacccgcagctgctcagtaatgacgtgtgaccgcaaggcacgtgcagat
gggaactggggcctttggtctccttggtctgcatgcacaaccacatgcggtgaaggcgac
atcacacgggtccgtctgtgcaacaatcctccaccatcaaaggagggcaaggggtgcaaa
ggatatgccaaggagacaaaatcgtgcaacaacacagtctgccctgttgctggacgttgg
accgcctggggtgagtggtcgcaatgctccgcttcctgtggtggaggccttatgagccgc
cagcgggagtgtttgaaccccgcccctcagaatggcgggaaaccttgtgctggggaagct
tcagactatgaagcatgcaacaaacaaccgtgtcctattgatctgtgtttcctttcaaat
ccttgttttcctgaggtgaaatgcacatcaaagagtgacggatcctgggaatgtggacat
tgtcctgtcggtctgaaggggaatggtactcactgcgaagatgagaatgagtgtgaagta
gatggggtgtgttttacaaaatgtgtgaacacagatcctggattctactgccttccctgt
cctcctcgatacaaaggcaaccagctgtatggcatcggactgcaggaagccatgaaagcc
agacaggtgtgtgaaccatataatccttgcaaagaaaacacacacacctgccaccagttt
gctgattgcaaatacctgggtctggcatcagaagtcttgtttaagtgctcgtgtgctgtt
ggctttgctggcgatggctccgtgtgtggtgaagactctgatctggatggttggcccaat
gaaagactgccatgcaagcagaatgccacttatcactgtgaacaggataactgccccatg
ctgccaaactccggacaggaagacttggacaaggatggacagggggatgcatgtgatcct
gatgatgacaatgacaacatcattgatgagagagataactgccccctgatgtacaaccct
cggcagtttgattctgacagggatggggtcggggattcctgtgataactgtccgtttgac
aggaacccgaagcagacagacagcgatggcaatggagaaggagatgcctgcagcattgat
atagatggagatgagaaactgaatgagcttgacaactgtccttttgtgtacaacactgac
cagagggacaccgacctggatggtgttggagatcagtgtgacaactgcccccttcttcac
aacccactgcagcttgactctgacagtgacctggttggggacttgtgtgacaacaacgag
gacatcgatgaggatggacaccaaaactctctggacaactgtccctacattgccaacagt
aaccaggctgaccatgacaaggatggaaagggagatgtttgcgaccatgacgatgacaac
gacgggatccctgatgaccgggacaactgcagactggttcccaatacagaccagttggac
tcagatggtgatggcagtggagacgcgtgctttgatgactttgacaatgacaacattcca
gatgcactggatccctgtcctctgaaccaggatattggagtgacagacttcaggaagttt
caggtggtattgttggaccccaaaggcaccacgcagtctgaccccctgtgggtgatccgt
agtcaggggactgagctgctgcagaaagctaactctgaccctgggattgctttagggtat
gacaagtttagcgctgtagacttcagtgtgacattttatgtgaataccaaccgtgatgac
gactatgctgggattgtgtttgcttatcagtccagtcggcggttctacgtagtcatgtgg
aaacaggtgtctcagggttactgggagcagaggccctccaaagcttttgccacagcagga
ctatcaatcaaactcgtccattccagcacaggaccaggggagtacctacgtaatgctctt
tggcacactggaaacacaagacaccaggtcagaacattgtggcatgaccccaataaaatt
ggctggaaggactacacagcataccgtatgcaccttatacaccgacccaagactgggttc
atcagggtggttgtgtatgagggcaggggaattctggctgactcaggggcagtttatgac
cacaccctggcaggaggcagactgggactgtttgtcttctctcaggaacaggttatcttc
tcagacctaagatatgactgcagagacaactga
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