Girardinichthys multiradiatus (darkedged splitfin): 124875367
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Entry
124875367 CDS
T08099
Symbol
tnrc6ba
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124875367 (tnrc6ba)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124875367 (tnrc6ba)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124875367 (tnrc6ba)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124875367 (tnrc6ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
124875367
NCBI-ProteinID:
XP_047233452
LinkDB
All DBs
Position
10:complement(1808681..1828702)
Genome browser
AA seq
2114 aa
AA seq
DB search
MKVKKRVFLIPPDGNQPASRSSYVIPEKGEFGQEQQFMEDKKRKKDDKRKREASQKVAEQ
KNKVTDVTKPAAAQSPAAQSSSTSPSPGPTPSASPTPATSGPGSAATPSQGGNNAKRLAV
ANGQPSSNTNSSTTAGGLGAAGNGSTGSGGGTQAPQQPSRYMPREVPPRFRGQQDHKVLL
KRGQPPLSSMLLGGGGGEDGPNANMAAVSDSASSLCLTSSVAASTTISNYANSMWGSSSG
SQASSQGKEKVIVDGNNLEEWPSIAGSDGGNGGSSGMPVNSISASGNQPSPTSSFPLPKE
CMQSSNSVAWGTTATQGHLGGGTAVAATGPLLQQPSSISKAPVVPGSHDANGPVDGSSGI
PGANFSPNANPSAWPALVQQDGPTDPGEGALTSFHPQGSGGSVNNSASLGLGGRAVGVLG
SHPSISVNQSSTHQHQLHQMQSRDREAGVGKWDSESAGPKISGGDGIGGGLDHGVGGGRV
SAGDHSLATSWRGQPSYPAAYSKTGVSRTDGWEDGGSGGLGAAEGEKGTSGWGYPSSSCG
SAENGGNCGQTSGTSQGGWGLSVVGADRGVSGSDWGSSSTGIGGSNPGAGERGNCSSNSS
SSGGSTVGNPPTASSSSTTAPATSKAWDNQKGEVGEWGDGGEGHGGRGGSSSSGGNSRSG
SVPDRIRRQAPNPEAALQNLLSRSDLDPRVLSNSGWGQTQIRQNTAWDLDEHAGQSKVGP
PSASLKHSAGLTGPAQYSSGPRTLSTDSTGQGVSSSLIPSTGSSGEGWESSSNSSSSGAS
LSGRGLPPTCTNMRNLGISQSGPVTSSAPGMGSGMVPGAKATGWVEGGNGAGDKHDSKDW
GNEEWRSNSRAEKGRGWGDVRQRCDSLSGRWGDRHHEKGAECWKDMGGSDEGSGWGSKSK
VGSGKNWLEQESKSSSGGGGWDDERRNGGHSQGDSGGGGWGNWDSSAPRRTWGTGGTGGG
GGGAGGMDGGGGMGSKPHQGWSEGNKMHQMPNCQSGSISGPQAQLQQQQSQPHNQHPQLQ
QASDQGVMQGGGGRKLVSQTQTQNQSSGWNSGPIPGVSGGGGSGPEPSGWEEPSPQSISR
KSEIDDGTSAWGDPTHYNYKPVNLWDKNSGSSSQQPHGQGLTQQQQGPPVQQQLQQGPPV
QQQPSRQATALTEPSGWGITSPANPSVDNGTAAWAKPSDAPTGWGEPDDAGGKTACWGNP
SPNSIRSGPKSMQGGWGDKESSVAASRHSSWEDEEEGGGMWNSTGSQGSGSSWGQGSNGG
WGQSNPVKKTSSKGPLKAGGDSWMSPINRQFSNMGILNDDPSGPNIDLPPGSLQEKRMEA
EKRGIGINDYNGDMRKGGRGGGPSGGVIYRPPGSKDPAQVDPGSYYDKTVHLINQDGCLG
EEGPCPLYSPPTGYKSHTLFNHSVPFRQGGHNIFGGTGGMTQSRHQPSIPPINQSPGMRA
QVPHQFLSPQVPGSMLKPMPTPSGSVGGVGGMGGVPGVGAGVFPPQLSPQHLAMLSSIYP
PHIQFQLACQLLLQQQQQQPPQQQQILQNQRKFTPNVRPQTDPQQLARIMAVLQQQRQQQ
QIGGLGGGPKLSPSHHGGVGPKLSGAETLPHPGLAGSVAELQQKPFGSYSGFGSAVNLPG
LELGGSIVGGPGAMKDLSAQQSRFKWMMEGNCSPDTSSPENLYHKNGPVTPIKMPGSSPY
SQFDIMVGDGPSDNWHRTPGNKMGAKPTNTPSWPPEFQPGVPWKGIDRVDPESDPYMTPG
SMMGNAVSPGLNDTEHQLLQDNNDSTPSLNTLLPSPGAWPYSASDSLLNNAHNSAKYTDY
KTSWPPEPIGHKSWKASRGSSQAQLSRPPPGLASQKQPSPSPWSAGAPRLPGRGWASGSR
NTGSTWSDGNSRESCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALICYGSK
QEAAKAQSALHMCVLGNTTILAEFVSEEEVGRYIAHSQAGGAGSEGTSAGLGPTAASAVG
TGSNGGSCDRGGAGGTGGGGVEGVSPAGGAESSSSGWQSLDSTGSSSDPSATQGPGLGIF
TQWSSNGAGVGGAGGVEAGRQVLWGGIGGVSGAGYPGGGGGSLWASPALEDRHQMGSPAS
LLPGDLLGSSADSI
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaagaagcgtgttttcctcatccctcctgacgggaaccagccagctagcaga
tcttcatatgtgattcctgagaaaggagaatttggtcaggagcagcagttcatggaagac
aagaaaaggaaaaaagacgacaaacgcaaaagggaagcctctcagaaggttgcagagcag
aaaaacaaagtgacagacgtgaccaagccagctgctgcccagtctcctgccgcacagagc
agctcaacctcccccagccctggacctaccccctctgcctctccaaccccagcaacctca
ggccctggcagtgctgccaccccatctcagggcggcaacaatgccaagcgcctggcagtg
gccaacggacaacccagctccaacaccaattcttccaccaccgctggcggcctcggggct
gctgggaacggcagcacaggtagcggaggcggaacccaggcgcctcagcagccgtcgcgc
tacatgccgagagaagtgccaccgcggtttcgcggccagcaggaccataaagtgctactg
aagaggggtcagccaccactgtcctccatgctgctgggaggtgggggtggagaggatggt
ccaaatgcaaacatggctgctgtctcagattctgcatcttcattgtgtctcacctcatca
gttgctgcttctacaactatttccaattatgcaaattccatgtgggggtcaagctcaggc
agccaggcctcttctcagggcaaggagaaggtcatcgttgatggcaacaacctagaggag
tggccgagtattgctggcagtgatggaggaaacggcggcagcagcggaatgcctgtgaat
agcatcagtgcctctggcaaccaaccctcacccacttcctcattccctttgcccaaagaa
tgtatgcagtcgtccaatagtgttgcatgggggacaactgccacccagggtcatcttgga
ggaggtactgccgtagctgcaactgggcctctgctacaacagccctcctcaatttccaaa
gcccccgttgtgccagggagccatgacgccaatggccccgttgatggtagcagtgggatt
ccaggtgccaacttcagtccaaatgccaacccttcagcctggcctgccctggtgcagcag
gacggccccactgatccaggggaaggggctctgacttcctttcatccccagggttctgga
gggtctgtcaacaactctgcttccttggggctgggaggcagggcagttggggtgctgggg
agtcacccatctatatctgtgaatcagtcaagcacccatcagcaccaacttcaccaaatg
caatccagagacagagaggctggagtggggaagtgggacagtgaatcagcgggaccaaaa
atttcagggggggatgggattgggggaggactggaccatggtgttggaggaggcagggta
agtgcaggagaccatagccttgccacctcctggagaggccaaccttcttaccctgcagct
tactccaaaacgggtgtctcaaggactgatggatgggaggatgggggaagtgggggatta
ggagcagcagaaggagagaaagggacatcgggttggggataccctagttccagttgtggc
agtgctgaaaatgggggtaactgtggtcaaacctccgggacatctcagggagggtggggg
ttatcagtggtaggagcagatagaggggtttctggtagtgattggggtagtagctctact
ggtattggtggatcaaatccaggagctggcgaaagggggaactgcagtagtaatagcagc
agcagtggtggaagcactgtaggcaaccctcctactgcttcttcatcatcaacaacagcc
cccgctactagcaaagcctgggacaatcagaaaggggaagtgggcgaatggggcgatgga
ggagaaggacatgggggacgggggggatcttcatcaagtggtggaaattccagaagtgga
agtgtgcctgatcgaattcgccgacaggcacccaatcctgaagctgccttacagaacctg
cttagtcggtctgatttggacccccgggtcctgtccaactcaggctggggccaaacacaa
atccgacaaaacacagcctgggatcttgatgaacacgcgggacaaagcaaagttggacca
ccttcagcttcattgaaacactcggctggtcttacaggtcctgctcaatattccagtgga
cccaggaccctaagcactgactcaacaggtcaaggggtcagttcctccttaattccttct
actgggtcttctggggagggctgggagagcagcagcaatagcagcagtagtggggcatct
ttgtctggaagaggcctcccgcctacatgcaccaacatgaggaatcttggcatctcacaa
tctgggccagtgacctcctctgcacctggtatggggtcggggatggtgcctggggccaag
gctacaggttgggttgaaggaggaaatggggctggggataagcatgactccaaggactgg
gggaatgaagaatggagaagtaacagtcgagcagaaaagggaagaggatggggtgatgtc
aggcagagatgtgactcattaagtggaagatggggagatcgtcaccatgagaaaggggca
gagtgttggaaagacatgggtgggagtgatgaaggaagtgggtggggatcaaaatcgaag
gttgggtcaggtaaaaattggttggagcaagaatcaaaatcaagcagtggtggaggaggt
tgggacgatgagagaaggaatggagggcactcacagggagattcaggtgggggtggctgg
gggaactgggacagtagtgcaccccggaggacctggggaacaggaggcacagggggaggg
ggtggtggagcaggggggatggatgggggtggaggcatggggtctaaacctcatcaggga
tggagtgaaggaaacaaaatgcaccagatgccaaactgccagtcgggctccatctcaggc
ccacaggcacaactgcaacagcaacaatcacagccccacaatcagcatccacagctgcaa
caagcatcggaccaaggggttatgcaagggggcggggggaggaagctcgtctctcaaacc
cagacacagaaccaaagctcaggctggaactcaggacctattcctggcgtctctggtgga
ggtgggagtggacctgaaccaagcggctgggaagaaccctccccgcagtcaataagcagg
aagagcgagatagatgatggaacatcagcatggggagacccaacccattacaactacaag
ccagttaacctgtgggataaaaacagcgggtcctctagtcagcagccacatgggcagggt
ctgacccagcagcagcagggacctcctgtgcagcagcagctacaacagggacctcctgtt
cagcagcagcccagcaggcaggccacagcgctcacagaaccttcaggctggggtatcact
tctccagctaatccttcagtagacaacggtacggccgcctgggcgaaacccagtgacgct
ccgactggctggggtgaacctgatgatgctggagggaagactgcgtgctggggaaaccct
tctccaaactcaatcagatccggtccaaagtctatgcaaggtggctggggggacaaggaa
agttcggtggcagcttcacgccactccagctgggaggatgaagaggaaggaggcggcatg
tggaacagcacaggatcccaaggaagtggctcatcttggggccaaggaagcaatggaggc
tggggtcaaagcaacccagtgaaaaagaccagcagcaagggtcctctgaaggctggaggt
gattcatggatgagccccatcaacagacagttctccaatatgggaattctgaacgatgat
cctagtggcccaaacattgacctacctccaggttctcttcaggagaagagaatggaggcg
gagaagagaggcataggaataaatgattacaatggagacatgaggaaaggaggaagagga
ggaggtccaagtggaggagtgatttatcgtcctcctgggtccaaagacccagcacaagta
gatccagggtcttactatgacaagaccgtgcatttgatcaatcaggatgggtgccttggg
gaggagggtccttgccctctgtactcaccacccactggctacaagtcccataccctcttc
aaccactctgtcccctttagacaaggtggtcacaatatctttggcggtactggaggaatg
acccaatcaaggcatcagccaagtatccccccaataaaccagtccccagggatgcgagca
caagtgcctcatcagttcctgtcgcctcaggtgccagggtccatgctgaagccgatgccc
actcccagcgggagtgtgggaggtgttggtggcatgggaggggtgccaggagtcggagca
ggggtgttccctccacaactatcccctcagcatctagccatgctcagcagcatctacccg
cctcacatccagtttcagctggcttgtcagctcttattgcagcagcagcaacagcagcca
ccacagcagcagcagatcctgcagaaccagaggaagttcacaccaaacgtgcggccgcag
actgatcctcagcagctggccaggatcatggcggtgctccagcagcagaggcagcaacag
cagattggaggtttaggtggcggccccaagctctccccctcccaccatggtggagtgggt
cctaaactttctggagctgaaactctgccccatccaggcctggccggatcagtggctgag
ctgcagcagaaaccattcggatcatactctggctttggttctgctgtgaacctcccaggt
ctggaacttggaggctctatagtggggggacccggagccatgaaggacctaagcgctcag
cagtcccgctttaaatggatgatggagggaaactgttctcctgatacttcctctcctgaa
aacctgtaccacaaaaatggtcctgtcacccccataaagatgccagggagctcaccttac
tcccagtttgacataatggttggagatggaccgagtgacaactggcatcgcacccctggt
aacaagatgggtgctaagcctaccaacacaccaagctggcctcctgagttccagcctggg
gtgccatggaagggaatcgatcgtgttgatccagagtctgatccatacatgacgccaggg
agcatgatgggaaacgcagtttctcccggtctcaatgatacagagcaccagttgttacaa
gacaataacgattccaccccttccctgaacaccttgctgccttcacctggtgcctggccc
tatagtgcctcagacagccttctaaacaatgcacacaactcagcaaagtacacggactac
aagacaagctggcccccagaacccattggacacaagtcttggaaagccagtcgtggcagc
agccaggcccagttgtcccgtccacctcctggccttgccagtcagaagcagccatcaccc
tccccttggtcagcaggagctcctcggttgcctggaagagggtgggcaagcggctccagg
aacaccgggtcaacctggagtgacggaaactctcgggaaagctgctggttggtgctcagc
aacctcacaccccagattgatggttccactctgagaaccatctgcatgcagcacggtccc
ctgctgacctttcaccttggcctcacccaaggaagcgctctgatttgctacggctccaaa
caggaagcagccaaggcccaaagtgcactccacatgtgtgttctgggtaacaccaccatc
ttggcagagtttgtgagtgaggaggaggttggtcgttatattgcacattcccaggctggg
ggagctgggagtgaaggaacctctgcaggcttggggcccacggcagcttccgctgttggg
acgggcagcaacggagggagctgcgataggggaggtgcgggaggcaccggcgggggagga
gtagaaggcgtctccccggctggaggagccgagtcttccagctcagggtggcaaagtcta
gacagcacaggcagctcatcggacccttctgccacccaggggcccgggcttggcatcttc
acgcagtggagcagcaatggagccggggtgggaggagctggaggggtggaggctggaagg
caggttctctggggtgggattgggggagtgagcggggcaggttaccccggcggtggcggc
ggcagtctctgggcttctccagcacttgaagatcgtcaccagatgggaagccccgcctct
ctgctgccaggagacctgctgggcagcagtgctgactccatctga
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