Girardinichthys multiradiatus (darkedged splitfin): 124875534
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Entry
124875534 CDS
T08099
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124875534 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124875534 (smarcd2)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124875534 (smarcd2)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124875534 (smarcd2)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124875534 (smarcd2)
PBAF complex
124875534 (smarcd2)
GBAF(ncBAF) complex
124875534 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
124875534
NCBI-ProteinID:
XP_047233706
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All DBs
Position
10:5686900..5699529
Genome browser
AA seq
502 aa
AA seq
DB search
MASRGGFPAPQMNPTLSPMNVGHVAGMRMPGMPQSPAGYPRSMSSAPQYHQRSGMPPGRV
GGLMGSMGGQMPGPSYVGGSIPMRPGMGHHGMDVSRKRFLHQQHQQQHDALGGLRRGAKR
RKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIY
ISNTYTPSKPEGEESEKVSSWELRVEGKLLEEPGKQKKKFSSFFKSLVIELDKELYGPDN
HLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRA
NIMQALWLYIKNNKLQDSHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLHHPDPIII
NHIISVDPTDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIEYINQ
LKTERDFMLSFSNNPQEFIKDWLKSQCRDLKLMTDVTGNPEEERRTEFYEEPWVPEAVGR
YVYSKVQLRRQELEQVLGIRLT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagagggggcttcccggctcctcagatgaatccgactctgagccccatgaat
gttggccatgtcgcgggcatgaggatgcctggtatgccgcagtctcccgcgggttacccc
cggagcatgagcagcgctcctcagtaccaccagaggtctgggatgccacctggcagagtg
gggggcctcatggggtcgatggggggtcagatgcccggtccttcttacgttggtggcagc
attcctatgcggccaggcatgggccatcatggcatggatgtgtcaaggaagcgtttcctt
caccagcagcatcaacagcagcatgatgcgctgggaggcctgagaagaggagcaaaaagg
cgcaaaatggccgacaaggttctcccacaaaggatccgagacctggtcccggagtctcag
gcctacatggatcttctggcctttgagaggaagctggatcagaccatcgctcgaaaacgc
atggagattcaggaggccatcaagaagccgatcatgcaaaagcgaaagcttcggatctac
atttccaacacttacactcccagcaagcccgagggtgaggaatctgagaaagtgtcctcc
tgggagctgagagtggaaggcaaactgctggaggaacctggtaagcagaagaagaagttc
tcctctttcttcaaaagtcttgtgattgagctcgataaggagctttatggacctgacaat
cacttggtcgagtggcacagaatgcccaccactcaggagactgatggtttccaggtgaaa
aggccaggcgatgtgaatgtgaaatgcactcttctgctcatgcttgaccaccagccccca
cagtacaaactagaccctcgtttggcccgtcttctgggtgtgcacacgcagacccgggcc
aacatcatgcaagctctctggctctacatcaagaacaacaagctgcaggacagtcacgaa
aaggagtacatcaactgcaaccgctatttcagacagatctttggctgtccacgcatgagg
ttctctgagattcccatgaaactggcgggcctgctgcaccaccctgaccccatcatcatc
aatcacatcatcagtgtggaccccacagatcagaagaagacagcctgttacgacattgac
gtagaggtggacgaccctctgaaagcccagatgaacagcttcctgtcctccaccaccaac
caacaggaaattgcagctcttgaaatgaagattcatgaaacaattgagtacatcaaccag
cttaaaactgagagagacttcatgctgagctttagcaataatccacaagaattcatcaag
gactggttgaagtctcagtgcagagatctgaagctgatgacggatgtaacaggaaaccca
gaggaagagaggaggactgagttttacgaggaaccctgggttccagaagcagtgggcaga
tacgtttattccaaagtgcaactgaggaggcaagagttggagcaagtgttgggcatccga
ctcacctaa
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