Girardinichthys multiradiatus (darkedged splitfin): 124875611
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Entry
124875611 CDS
T08099
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03430
Mismatch repair
gmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124875611 (pms2)
03460 Fanconi anemia pathway
124875611 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124875611 (pms2)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124875611 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF7088
Motif
Other DBs
NCBI-GeneID:
124875611
NCBI-ProteinID:
XP_047233831
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Position
10:complement(34775567..34787247)
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AA seq
845 aa
AA seq
DB search
MSDVCTSEAAGAIRAIDKHSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDSG
AEQIEVSDNGRGVEEANFEALTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSV
ITCHESSQVGTKLVFDHQGYLVQRSPCPRQPGTTVTLQQLFYTLPVRHKEFQRNIKKEYA
KMIHVLQAYCIISTGVRITCSNQNGQGKRSTVLSTSGSNTMRENIGAIFGPKQLQSLLPF
QQVSPAENIMEEYGLKDGDLPKPLFSITGFVSTVDHGVGRSVSDRQFFFINSRPCDPIKV
SKLTNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQVFLQEEKLLLAILKASLITM
YEAGVNKISLNYTAAPIVASASKDVLFSGDNKAEPVENNQPATPSLKSAMNLAALKAAFS
NKNSAPSGSKSSMEKASNSGPSQKTLQCFFKDSVKSASTQCMKSPVQLKTEAVKCSSGGG
SVLDGFRYGGMSISNQESEKDSSLASCDFAVESPDSSEPVVESVNNDSTVSQNHPEDTEL
QTKACSSTEDSIISPEAKRARIDNPGFTTEQRSDATSKHLDTPSSMLDVPVCLQRKTIPL
HFSLQDLAASMKRLLDQQRQRAGEKLHYRRFRAKINPGENQSAEDELRREISKEMFKEME
IIGQFNLGFIITKLNSDIFMIDQHATDEKYNFEMLQQHTVLQGQKLIVPQPLHLTAVSEN
VLIENLEIFQRNGFEFLIDEDAQVMERVKLVSLPTSKNWTFGPADIEELIFMLSDSPGVM
CHPSRVRQMFASRACRKSVMIGTALSVSEMKKLVIHMGEIKHPWNCPHGRPTMRHLANLE
IISQD
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgtttgcacttctgaggcagctggagccatacgggccattgacaaacactca
gtacaccagatctgctcaggacaagtagttctgagtttggccacagctgtcaaagagctg
gtggagaacagcattgatgcgggagcaaccaacgtcgatgtcaagctgaaggactctggt
gctgaacaaatagaagtgtcagacaatggcagaggtgtcgaagaggctaactttgaagca
ctcacactaaaacatcacacctcaaagctgagagatttctcagatcttatccacgtggaa
acattcggctttcgaggtgaagccctgagctctttgtgtgctctaagcgacctgagtgtg
attacatgccatgagtccagccaagtaggcaccaaactggtgtttgaccatcagggctac
cttgtgcagcggtccccctgtcccaggcagccaggcaccacggtcactctgcagcagctc
ttctacacgctgccagttaggcacaaggagttccaacgtaatatcaagaaggagtatgct
aagatgatacatgtcctgcaggcctactgcatcatctctacaggggtgcgtattacctgc
tccaaccaaaacgggcagggaaagcgcagcaccgtcctcagcaccagcggcagcaacacg
atgagagagaacatcggagccatatttggaccaaagcagcttcagagtcttctgcctttc
cagcaagtatctcctgcagagaatattatggaagaatatggacttaaggatggtgattta
cccaaaccacttttttcaatcacaggctttgtgtccactgtggaccacggcgtagggcgg
agcgtctcagacaggcagttcttcttcatcaacagccgcccatgtgaccccattaaggtc
agcaaactcacaaatgaggtctatcacatgtataacagacaccagtatcctttcgttgcc
ctgaacatagctgttgcctcagactgcgtggatgtgaatgtaacccctgacaaacgacag
gttttccttcaagaggagaagctcttacttgccattctaaaggcctctctcatcaccatg
tatgaagctggagttaataagatcagcctgaactatacagcagcaccgattgtagcatct
gcatctaaagacgttctcttttctggtgacaacaaggcagaacctgtagagaacaaccaa
cctgctactccaagcctaaagtcagccatgaacctggccgccctcaaagctgctttttca
aacaagaacagcgccccctctgggagtaagtcaagcatggaaaaagcttccaacagcggg
ccgagccagaaaactctgcagtgtttctttaaggactctgttaaatctgccagcacccaa
tgtatgaagtcacctgtacaactcaaaacagaggcagttaaatgcagctcagggggaggg
tctgtcctcgatgggttcaggtatggagggatgtccattagcaatcaggagtctgaaaaa
gacagttctttggccagttgtgactttgcagtagaatcaccagattcctctgaaccagtt
gttgaaagtgtaaataatgactccacagtcagccaaaatcaccctgaggacacagagtta
cagactaaagcatgttcatccactgaggactccataatcagccctgaagctaaaagagcc
agaatagataatccaggtttcactacggaacaacgatctgatgccacttcaaaacactta
gataccccttcttccatgttagacgtccctgtctgtctacagaggaagactattcctttg
catttctccctgcaagacctggcagcaagcatgaagaggctgctggaccagcagaggcag
agggctggggagaagctgcattacagacgattcagggccaagatcaaccctggagaaaac
caaagtgctgaggacgagctccggagagagattagtaaggaaatgtttaaagaaatggag
atcatcggtcagtttaacctgggcttcatcatcaccaaactgaactcggacatttttatg
attgaccaacacgccactgatgagaaatacaactttgagatgctgcagcaacacactgtg
ctccaaggacagaaactcattgtcccacagccactccacctcactgcagtcagcgagaac
gtgctcatagagaacctggagattttccaaaggaatggatttgagtttctgatcgatgaa
gatgctcaggtgatggagagagtgaagctggtctctttgcccaccagtaaaaactggacc
tttggcccagccgacattgaagagctgatcttcatgctgagtgacagcccgggcgtcatg
tgccacccgtcaagagtcaggcagatgttcgcttctagagcgtgtcggaaatcagtgatg
attggcacagctctgagtgtcagtgagatgaagaagcttgtgattcacatgggtgagatt
aagcatccatggaactgtcctcacggcaggcccaccatgagacacctcgccaacctggaa
atcatctcacaggactga
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