Girardinichthys multiradiatus (darkedged splitfin): 124875616
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Entry
124875616 CDS
T08099
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124875616 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124875616 (gspt1)
03012 Translation factors [BR:
gmu03012
]
124875616 (gspt1)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124875616 (gspt1)
Translation factors [BR:
gmu03012
]
Eukaryotic type
Release factors
124875616 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124875616
NCBI-ProteinID:
XP_047233839
LinkDB
All DBs
Position
10:complement(1736392..1748533)
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWEQEEDAEALAPAAELPAAFAALNVNAKPFVPNVNAPVFVPSFLQSSNAE
MPGSDGSPEPAANMEVSDSAAPVENGNTEADMTAEEDTWEQKEEPGGGEGGGGQENLGTE
EGCEEGGAAGKEDEEMMEEEEEEIPIPKVAPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPV
SECPWYTGLPFISHLDSLPYFNRPSDGPVRLPIVDKYKDMGTVILGKLESGSISKALQLT
MMPNRHTVEVLSLLSDDVETDDAGPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRAAGIICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcatgggagcaggaggaggatgccgaggcccta
gctcccgcagcggagctcccagccgccttcgctgccctcaatgtgaacgccaagccgttt
gtccccaacgtgaacgctccagtgtttgtaccgagcttcctccagtccagcaacgctgag
atgccgggttcagacggttcccccgagccagctgccaacatggaggtctcagactcagcc
gctccagtggagaatggaaacacggaggctgacatgacagcagaggaggacacatgggag
cagaaggaggagcccgggggaggcgagggaggcgggggacaggaaaaccttggaacggag
gagggatgcgaagagggtggggcagcggggaaagaagatgaggagatgatggaggaggaa
gaggaggagatacccatccctaaggtggccccgccgccgcctgatgcacccaagaaagaa
cacgtgaacgtggtcttcattggtcacgtcgatgctggtaaatcaaccattggaggacag
atcatgtacctaactggaatggtggacaagcgaaccctggaaaaatatgaacgagaagcg
aaagaaaagaacagggagacctggtatttgtcgtgggctctggacacaaatcaggaggag
cgagacaagggaaagacggtggaggtcggaagagcttactttgagacggagaagaagcat
ttcaccatcctggatgctcctggacacaagagctttgtccccaacatgatcggtggcgcg
tcgcaggctgatctagctgttctggtcatttctgcaaggaaaggtgagtttgagacgggc
ttcgagaagggtggacagacgcgggagcacgccatgctagctaaaacagctggagttaaa
catctaattgttctggtcaacaagatggatgaccccactgtgaactggagcctagaaaga
tatgaagagtgtaaagaaaagctggtgccatttctaaagaaggtgggcttcaaccctaag
aaggacatccacttcatgccttgctctggactcacaggtgccaacctcaaagacccagtg
tctgagtgcccctggtacacgggtttgccatttatttcccacctggacagtttgccatac
ttcaacagacccagcgatggacctgtcagactaccaattgtggacaagtacaaggatatg
ggcacggtcatccttgggaagctggagtccggctccatcagtaaagctctgcagctgacc
atgatgcccaacaggcacacagtggaggtactgagcctgctgagtgacgacgtggagacg
gacgatgccgggcccggggagaacctgaagctgcggctgaaaggaatagaggaagaggag
attctccctgggttcatcctctgcagccctgacaacctgtgccactctggtcgcaccttc
gatgcacagattgtcatcattgagcacaagtcgatcatttgtcctggttacaacgcggtc
cttcacatccacacctgcatcgaagaagttcagatcacagcattaatctgcctggttgac
aagaagacgggagagaaaagcaagacgcgaccccgctttgtgaagcaggaccaggtctgc
atcgccaggctccgggcagcagggatcatctgcttagagaccttcaaagacttccctcag
atgggacgattcactctgagagacgaaggtaaaactatcgccataggcaaagtgctgaag
ctggttccagaaaaggactaa
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