Girardinichthys multiradiatus (darkedged splitfin): 124875870
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Entry
124875870 CDS
T08099
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124875870 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124875870 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124875870 (vps36)
Membrane trafficking [BR:
gmu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
124875870 (vps36)
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124875870 (vps36)
Exosomal proteins of colorectal cancer cells
124875870 (vps36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
TssO
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
124875870
NCBI-ProteinID:
XP_047234231
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All DBs
Position
11:complement(23686012..23692516)
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AA seq
382 aa
AA seq
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MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKLEVGVALLSTHRLIWRDGKNNDCCLA
IPLSQIIFFEEQAAGIGKSAKIVIHLHPSPPNKEPGPYQNSKFSYIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPSSQPISTGTGSQAGRTRAVGIVGIERKIEEKRKETEKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLLNACKMFESLKLP
LRLRVFDSGVMVVQLESHSEEEMIASALDNVTEKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYANCF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttttcgtggtcaaatggcctcttagaaataaacgaaacgttagtgatacag
cagcgaggcgtcaggctgtatgacggtgatgataaggcaaaactggaagttggtgttgct
ttattgagtacccataggttgatctggagagacggaaagaataatgactgctgcctggcc
atacccctgtctcagattattttctttgaggagcaggctgcaggaataggaaagagtgca
aaaatagttatccacctgcatccatcaccccccaacaaggagccaggtccataccagaac
agcaagttctcctacatcaagctgtctttcaaagaacatgggcagattgagttttacagg
agactgacagaagagatgacccagaaaaggtgggagaataccccaagttcacagcccatc
tcaacaggaactgggtctcaggcaggaaggacacgcgcagtgggcattgttggcattgag
agaaagatagaggagaagaggaaagaaacagagaagaacatttctgaggcctttgaggac
ctcagtaagctgatggtaaaggccaaagagatggtggagctgtccagatctattgccaac
aagatcaaagacaagcagggagatataacagaagatgagacaatccgctttaagtcttac
ctcttgagcatgggtattgccaaccctgttacgagggaaacacacggatcgggtacacat
tatcacatgcagctggctaaacaactgggagatatgctgcaggctcctctagaggagcgt
ggaggaatgatggctctcacagaggtgtattgtcttgtcaatcgtgccagagggatggag
cttttatctcctgaagatttgttaaatgcatgcaaaatgtttgagtccttgaaactgccc
ctgaggctgcgtgtgtttgacagcggtgttatggtggtccagctggagtctcacagtgaa
gaagaaatgatagcctcagcgctggacaatgtgactgaaaaaggctccctgacagcagag
gagtttgcaaagctcttgggtctttctgttcttctgtccaaggagcggttgttgcttgct
gagaagatgggccacctttgtagggatgactctgttgagggtttaagattttacgcaaac
tgtttttga
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