Girardinichthys multiradiatus (darkedged splitfin): 124876034
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Entry
124876034 CDS
T08099
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04514
Cell adhesion molecule (CAM) interaction
gmu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124876034
04517 IgSF CAM signaling
124876034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124876034
04090 CD molecules [BR:
gmu04090
]
124876034
04091 Lectins [BR:
gmu04091
]
124876034
Cell adhesion molecules [BR:
gmu04515
]
Immunoglobulin superfamily
L1 family
124876034
CD molecules [BR:
gmu04090
]
Proteins
124876034
Lectins [BR:
gmu04091
]
I-type lectins (Siglecs)
124876034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
C2-set_2
Ig_4
Ig_5
C2-set_3
VEGFR1-3_N_Ig-like
Izumo-Ig
V-set_CD47
Fn3_VIN3
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
124876034
NCBI-ProteinID:
XP_047234466
LinkDB
All DBs
Position
1:complement(46315999..46388182)
Genome browser
AA seq
1299 aa
AA seq
DB search
MFVSQRPWIGCRGPYSPVLPLILLPLSFLLAQGAISIPEHYNIPRLQTPPSLTVVPAAVT
AFSREDIILTCEASGNPTPHIRWVKDGAQFGREQKGSGKVNASEYGKEAPLESFAGFYQC
FASNDLGTAMTQTVKVIVEPHPFIPKENELTKTAFVGQSIILTCNPPKRSTPPRIYWMGT
GMVHIPQNERVMIGLDGNLYFSNLVMDDSREDYNCYAQYTSARTIIHPTAVKLTVQSSND
VSQEKGPHFLQPQDSHNVVPALRGQTVTLECIPKGLPTPKVEWQKTDGVLKTTSASLNNS
ARWLHFKSITEDDDGEYKCRAHNIHGNATRSFTITVKAAPYWTKQSPDLKYAPGETVRLD
CLAKGNPDPTITWRINGEPLTGGTAVDEDSRRTVTSSALILRDVVLSDTAVYQCEATNVH
GSILQNINLFVVELPPQILSSDGMVYKVFEDEDINMDCESFGAPRPHISWERDDMVPLLS
DPRVSLFTNGTIEIVNVTHEDQGVYTCSVDNTNISITANLEVFDKTEILKGPQDIYVHRG
EAVFLDCHFYKDPRLHGSKVHWKKDNLNLRMLDKYTFFKNNTLKVTKVQSDDTGNYTCEV
ETEPLGHVKATGSIIVEAPPGPPGSVSLSGVEDHSVNLSWIPGPSHNSPITVFIVEGHEQ
PHSEGRNSAWQTWTTVPGNFSHVVLRLKPFCNYRFRVTAVNKIGQSNPSKPSNEHRSPPA
APGLNPTNVRTNSTDPGTLLITWDEMEKHLHNGQDFKYQVYWREANNKNTNWNTASVKSP
PFIVNNTGTFTPFEIKVQAVNAVGSGPAPVTMTGHSGEDKPEEAPTGVSTTVMNSTVRVT
WNQVRNVRGHLLGYRIYIRRLGPSSRRDRRSLGKHHHMGERDKHEHHKRTNRDSWMVEVR
GPKTSAEVTGLRLFSQYELRLTAFNSKGESPPSTPVHLNTPEGAPGPPASLRFESPTETS
LILHWTPPHEINGKLLGYVVQYQQDGESHGNLVKFEMISDQVNHFELNDLDPSSYYIFKV
IALTAAGQGPYIEGRVATLLEGVPPSNITVVSSNTSFNLSWVPGDRHRNHGFHIHYLRWK
SGKELEKGLGSAAGVRWERSELINSTQGFYSLTGLQPGTKYSLMILHDNNSHWQQDFRTM
GPEPSEMPGRFATQGWLIGLISAILLLILILLILCLIKRSRGGKYAVKDKEKKEIDFDLQ
NKDETFGEYRSLESDGDEKRSDSQRSLCDHSKLGSEDSLAEYGDSVDIQFNEDGSFIGQY
SGRAAAPHGNESSGPASPVNPVPPPPIAPSMSSVLNRPS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgtcacagcgtccgtggattggctgtagggggccatactcccctgttctcccc
ctgatcctcctgcctttgtccttcctgcttgctcagggagctatcagcattccggaacac
tataacataccccgcttgcaaacgcctcccagtctgacagtggtgccagcagcggtgacg
gcgttttctcgagaagatataattctgacctgtgaggcctctggcaaccccacaccccac
atccgctgggtgaaggatggcgcccagtttggcagggaacagaaagggtccggaaaagtt
aacgcctcagaatacggaaaagaggcgccgctggaatccttcgccggcttctaccaatgt
tttgcctccaatgacctggggactgccatgacacaaactgtaaaggttatagttgagcct
catccatttataccaaaagaaaacgaattgaccaagacagcatttgtaggccagagcata
atcctgacctgtaaccctccaaaaaggtctactcctcctcggatctactggatgggcacc
gggatggttcacattccacagaatgaaagagtaatgattggcctggatggaaacttgtac
ttttcaaatcttgtgatggacgacagcagagaggactacaactgctatgctcagtacaca
tcagccaggactattatccatccgactgctgtaaaactcactgtccagtcaagtaacgat
gtcagtcaggaaaaaggaccacatttcctccaaccccaagactcccacaatgtagtgcca
gccctcaggggtcaaactgtcacccttgaatgtatccccaaaggcctgcctactcccaag
gtggaatggcagaagacagatggggttctgaagaccacaagtgcctcgctaaacaacagt
gcccgctggcttcacttcaagagcatcaccgaggatgatgacggagagtacaaatgtagg
gcgcacaacattcatgggaatgcgacacgttcctttacaattactgtaaaagcggctccc
tactggacgaagcagtccccagacctgaagtatgcaccaggggaaactgtaagactggat
tgtctggccaaagggaatcctgaccccaccatcacctggagaatcaatggcgaaccactg
acaggtgggacagccgtggatgaggattcccgtcggaccgtaaccagcagcgcactgata
ctgagggatgtggtactttctgacacagccgtctatcagtgtgaagccaccaacgtacac
ggctccatcctccagaatatcaacctgtttgttgttgagcttcctcctcagatcttgtct
tctgatgggatggtgtacaaggtctttgaagatgaagacatcaacatggactgtgaatct
tttggtgctcctcgaccacatatatcatgggagcgtgacgacatggttcctctgctgtca
gatcctcgtgtttccctgtttaccaatggaacaattgagatagttaatgtcacccatgaa
gaccagggagtgtacacctgctctgttgataacaccaacatctccattactgctaacctg
gaagtttttgataaaactgaaatactcaaaggtccccaggacatctacgtccacagagga
gaagctgttttcctggactgtcacttctacaaggatcctcgactgcatggctccaaggtc
cattggaagaaagacaacctgaacttgaggatgcttgacaagtacacttttttcaagaat
aacacactaaaagtgacaaaggtccagtcagatgacacaggaaattacacttgtgaggtc
gaaactgaaccactgggccatgtgaaagccactggctccatcattgtagaagctccacca
gggcctccgggttctgtatccctgtccggtgttgaggaccacagcgtcaatctcagctgg
atcccaggaccctcacacaacagccccataacagtgttcatcgtggaaggccatgagcag
ccccactcagagggtaggaactcagcatggcagacgtggaccacggtacccgggaacttc
agtcacgtcgtgctccgcctgaagcccttctgcaactaccgcttcagagttaccgctgtt
aataaaattggccagagcaaccccagcaagccctccaatgagcacaggtcaccaccagca
gctccaggattgaaccccactaatgtgcgcactaattcaacagatccagggactctgcta
atcacatgggatgagatggaaaagcacctccataacggccaggacttcaagtaccaggtg
tactggcgggaggctaacaataaaaacacaaactggaacactgcctctgtgaagtctcca
ccgtttatagtaaataacacaggaaccttcacaccatttgagatcaaagtccaggcggtc
aatgcagtcggatcaggaccagcacctgtgacaatgacgggacattccggggaggacaag
ccagaggaggcccccactggagtttcaaccactgtgatgaacagcacggtcagagtgacg
tggaaccaagtgcggaacgtccgtggtcatctgctgggttacaggatatacatcaggagg
ctaggtccttccagcagacgagacaggaggtctcttggcaaacatcaccacatgggggaa
agagacaaacatgagcaccataaacggacgaacagggacagctggatggttgaggtccgt
ggtccaaagacttcagctgaggtcactggtttacgcctcttctcccagtatgagctcagg
ctcacagccttcaacagcaaaggggagagccctccttccacgccggtacatttaaacacc
ccagagggagctcctggtcctcctgcatctttgaggtttgaaagccccacagagacctca
ctgattcttcactggactcctccacatgaaatcaatggcaaacttctgggatatgtggtg
cagtaccaacaagatggggagagtcatggcaacctggtgaagttcgagatgatcagcgat
caagtaaaccattttgagctgaatgatctggaccctagcagttattacatctttaaggtt
atcgcactaactgctgcaggacagggtccttacattgaagggagggttgccaccctgctg
gaaggagttcctccatcaaacatcactgtagtttccagcaacacgtcgttcaacctgagc
tgggtgcctggagaccgccacagaaaccacggtttccacatccactacctcaggtggaaa
agtggaaaagaactggaaaaaggattgggaagcgcagctggcgttaggtgggaaaggtca
gaactgatcaactccacacagggtttctattcgctcacaggcctccaaccaggaacaaaa
tacagcctaatgatcctgcatgataacaactctcactggcagcaggatttccggaccatg
ggaccagagccctcagaaatgccgggcaggtttgccacccagggctggttgataggactt
atcagcgccattctgcttctgatcttgatcctcctcatcctctgtctaattaaacgcagc
aggggtggaaaatatgcagtgaaagacaaagaaaagaaggagattgactttgaccttcag
aacaaagatgagacctttggagagtacagatccctggagagcgatggagacgagaagcgt
tctgacagccagcggtctctctgcgaccacagcaagctggggagcgaggactccctggct
gaatacggagacagtgtggacatccagttcaacgaggacggctccttcatcggccagtac
agcggccgtgcagccgctccccatggcaacgagagctctggtccggcctccccagtcaat
ccggtccctccgcctcctattgccccgtctatgtcgagcgtcctcaaccggccgagctag
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integrated database retrieval system
