Girardinichthys multiradiatus (darkedged splitfin): 124876253
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Entry
124876253 CDS
T08099
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04142
Lysosome
gmu04144
Endocytosis
gmu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124876253 (cltca)
04142 Lysosome
124876253 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124876253 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124876253 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124876253 (cltca)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124876253 (cltca)
Exosome [BR:
gmu04147
]
Exosomal proteins
Proteins found in most exosomes
124876253 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
124876253
NCBI-ProteinID:
XP_047234827
LinkDB
All DBs
Position
11:complement(25747713..25784045)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDEKQKWLLLIGISAQQNRVVG
AMQLYSVERKVSQPIEGHAASFAQFKIEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFAKKAVDVFFPPEAQNDFPVAMQISAKHNVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHDATSGIIGVNRKGQVLSVCVEEENIIPYINNVLQNPDLALRLAVRNNLAG
AEELFARKFNNLFASGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSMECLRAMLSANIRQNLQICVQVASKYHEQLSTQALTELFESFKSFEGLFYFLGSIV
NFSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDAELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADNTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHISNLDRAYEFAERCNEPAVWSQLAKAQLQKELVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKAIQYYLEFKPLLLNDLLMVLSPRLDHSRAVNFF
TKVKQLPLVKPYLRSVQNHNNKPVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQ
ENKRECFAACLFSCYDLLRPDVVLETSWRHNIMDFSMPYFIQVMREYLSKVDKLETSESV
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYGQPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgccaattcgctttcaggagcacctgcagctccagaatttgggaatc
aatccagccaacataggcttcagcaccctgaccatggagtctgacaaattcatctgtgtg
cgggagaaagtaggggagcaggctcaagttgtgatcatcgacatggccgacccaaatact
ccgatccggagacccatctcggctgacagcgccatcatgaatcccgccagcaaggtcatt
gcacttaaagacgcggccaaaacccttcagatctttaacattgagatgaagagcaagatg
aaagcacacactatgacagacgacgtgactttctggaagtggatctctctgaacacagtt
gcacttgtgactgacaccgctgtgtaccactggagcatggagggggactctcaacctgtc
aaagtctttgaccgccactccagcctggcaggctgccagatcatcaattaccgcactgac
gagaaacagaaatggctccttctcatcggtatctctgctcagcaaaatcgagtggtggga
gccatgcagctctactctgttgaaagaaaagtttctcagcccatcgaaggccacgctgcc
agcttcgcccagttcaagatagaaggaaatgcagaagagtcaactctgttctgctttgct
gtcagaggccaggctggaggaaagctgcacatcattgaggtggggaccccaccgactggt
aatcagccgtttgccaagaaagcagtggatgtcttctttcctcctgaagcacagaatgac
tttcctgtggccatgcagataagtgctaagcacaatgtggttttccttattaccaaatat
ggctacatccacctgtatgacctggagacgggcacctgcatctacatgaaccgcatcagt
ggagagaccatctttgtcaccgctccacatgacgccacctcaggcatcattggggtcaac
cgaaagggacaggtgctgtctgtttgcgtggaagaagaaaatatcattccatacatcaac
aatgtgctgcagaatccagatcttgcgctccgcttagctgtccgcaacaacctggcagga
gctgaagagctctttgcaagaaagttcaacaacctgtttgcttctggcaactactctgaa
gctgccaaagttgctgctaatgcaccaaagggaatcctgcgcacaccagacaccattcgt
cgtttccagagcgttcccactcagccaggccagacctctcccttgctgcagtactttggt
atcctgctggaccagggccagctcaacaagtttgagtccctggagctttgcagacccgtc
ctccagcagggacgaaagcagcttctggagaagtggctgaaggaagacaagttggagtgt
tcagaggagctgggtgatctagtgaaggcagtggatcctaccttggccctcagtgtgtat
ctgcgggcaaatgtccccaacaaggtcattcagtgctttgcagagactggtcagttcccc
aaaatcgtcctgtacgccaagaaggtgggctacaccccagactggattttcctgctcagg
aacgtgatgcgcataaacccagaacaaggtctgcagtttgcacagatgctggtccaggat
gaagagccgctagcagacatcacacagattgtggatgtgttcatggagtacaacctgatc
cagcagtgcacctctttcctcctggatgctttgaagaacaacagaccttcagaagggcca
ctgcagactcgcctgttggagatgaatctcatgcatgctccacaggttgctgatgcaatc
ctgggtaaccagatgttcacacactatgaccgtgcccacatcgcccagctgtgtgagaag
gctggacttcttcaaagggcactggagcactacacagacctgtatgacatcaagcgtgct
gtggtgcacacacaccttctcaacccagagtggctggtgaacttctttggctcgctgtct
gtggaagattcaatggagtgcctcagggccatgctctcggctaacatccgccagaaccta
cagatctgcgtccaggtggcttcaaagtaccatgaacagctctccacacaggctctcact
gaactgttcgagtccttcaagagctttgaaggtttgttctacttcctgggctctattgtt
aacttcagtcaggatgctgaagtccacttcaagtacattcaagctgcctgcaagacaggc
cagattaaagaggtagagaggatctgtagagagagcaactgctacgaccctgagcgtgtc
aagaatttcctcaaggaagccaagctcaccgaccagctgcccctcatcattgtctgtgat
cgctttgattttgtccatgacctggtcctctacctgtacagaaataacctgcagaagtac
attgagatttatgttcagaaggtgaatcccagccgtctaccggtcgttgttggtggtctc
ctggatgtggactgctctgaggatgtcatcaagagtctgatcttggttgtcagaggacag
ttctccactgatgaactggttgctgaggtggaaaagaggaacagactgaagctgttgcta
ccctggctggagtcccgtatccacgaaggctgcgaagaacccgctacccataatgccctg
gcaaagatatacattgacagcaataacaaccctgaacgcttcctgcgggaaaacccttac
tatgacagccgtgtggtgggaaagtactgcgagaagagagaccctcacctggcctgtgtg
gcttatgagcgaggacagtgtgaccaggagttaatcaatgtttgcaatgagaactccctg
ttcaagagcttgtctcgatacctagtcagacgcagagatgctgagctgtgggccagcgtg
ttgcttgagagcaacccctacagacgaccacttattgaccaggtggtgcaaactgctctg
tcagaaacccaggaccctgaggaggtttcagtcactgtcaaagctttcatgactgctgac
ctgccgaatgagctcattgagctgctagagaaaattgtgttggacaactctgtcttcagt
gaacacagaaatctgcagaacctgctgatcctgactgcaatcaaagctgacaacacacgt
gtgatggaatacattagcaggctggacaactatgatgcccctgatattgcaaacatcgcc
atcagcaatgagctctttgaggaggcatttgccatctttaagaagtttgatgtcaacacc
tccgctgtgcaggtgctcattgagcatatcagcaacctggaccgggcctatgagtttgca
gaacgctgcaatgaacctgctgtgtggagccagctggccaaggctcagctgcagaaggag
cttgttaaagaagccattgactcctacatcaaggctgatgacccatctgcatacatggag
gtggtccaggcagctgataagagtggtaactgggaggaccttgtcaagttccttcagatg
gctcgcaagaaggctcgtgagtcctatgtggagaccgagctgatctttgccttggctaaa
accaaccgcttggctgaactggaagagttcatcaatggacccaataatgctcacattcag
caggttggtgaccgttgctatgacgagaaaatgtatgaagcagctaaactgctttacaac
aatgtctccaactttggtcgcctggcttccaccctggtgcatctgggagagtatcaagct
gctgtggatggagcccgcaaggccaacagcacccgcacctggaaggaggtctgctttgcc
tgcgtggacggccaggagttccgactggcccagatgtgtggcctccatatagtggtgcat
gctgatgaattggaggagctgatcaattattaccaagatcgtggctactttgaggagttg
atcactatgcttgaggctgccttgggcctggagcgtgctcacatgggcatgttcacagag
ctggccatcctttactcaaagttcaaaccccagaagatgagggagcatctggagctgttc
tggtccagagttaacatcccgaaggttctgagagcagctgagcaggctcatctgtgggca
gagctggtcttcctttatgacaagtatgaggagtttgacaatgccatcatcaccatgatg
aatcacccaacagatgcctggaaggaaggccagttcaaagatatcatcaccaaagtggcc
aatgtggagctgtactacaaagccatccagtactacctggagttcaagcctttgttactg
aatgatttgctgatggtgctttcccccagactggaccattcacgtgctgtcaacttcttc
actaaggtgaaacagctgcctctggtcaaaccttacctacgctcagtacagaaccacaac
aacaaacctgtcaacgaagcacttaacaacctcttcatcacagaggaggactatcaggcc
ctgaggacatcgatagatgcctacgacaactttgacaacatctcgctggcccagcgcctg
gagaagcacgagctgattgagttcagaagaatcgctgcctaccttttcaaaggcaacaac
cgctggaaacagagtgtggagctgtgcaagaaggacaagctatacaaggatgccatgcag
tatgcatcagagtccaaagacatagaactggcagaagagctgctgtcctggttcctacag
gagaacaagagggagtgtttcgctgcctgccttttctcgtgctacgacctgctgcggcct
gacgtggtgctggagacctcctggaggcacaacatcatggacttctcgatgccatacttc
attcaggtcatgagggagtacctctccaaggtagacaagcttgaaacctcagaatccgta
aggaaagaagaggagcaggcaacagagacgcaacccatcgtctacggaacacctcagctg
atgctgaccgcaggccccagcgtacctgtggctccacagcaagcttacggctatggctac
caggcgcctgcgggatacggtcaaccagcagctcagccaggctttggctacggcatgtga
DBGET
integrated database retrieval system
