Girardinichthys multiradiatus (darkedged splitfin): 124876264
Help
Entry
124876264 CDS
T08099
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124876264 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124876264 (nup98)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124876264 (nup98)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124876264 (nup98)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124876264 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
124876264
NCBI-ProteinID:
XP_047234854
LinkDB
All DBs
Position
11:complement(1246345..1265221)
Genome browser
AA seq
1822 aa
AA seq
DB search
MFNNSFGTPFGGGTGGFGSSSTFGQQNTGFGTTGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGPASGTSTSLFGNTGTGASSGLFSQQNNAFGANKPTSFG
SFGTSASSSGLFGSTNTTTNPFGGSSSLFGGSGFAANQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPIAPGTGGLFGGATPTSSAST
GLFGASAANTNFNFGANKSTFGATTGSFGTTTAGLFVQPNQQPANSLFKPFGAATTTQNA
GFTFGNTNTTGQPNTSNTGLFGSTAASQPASLFGTTPSGTTTGIGTGTGLFSLPNQTGFG
NVSTQLFGNKSNVFGPTTSAPSFGTATGIFGNKTTLTLGTGTNPSTFGFGGNQAGGGPFG
TKTATGGLGNNFGTVGTGATLFGNNQNKLGTTLGTMGPFGTTVPFNSGASGLGFGAPQQP
VALTDPNTSAAQQAMLQQQLNVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQKALT
TPTHYKLTPRPATKVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVLKNL
NSSQYSSSSLNKENDDLASPSDYPQNGHSQAEEEEIREVPAVSSRTDDDPEVTQFYVNPI
AKPIPQGRTQTSLQDTISDLNLHKQSRNGLELSSNDVSASFGEDSLHEDEEEEEQQQESK
QSPHPAGIILNRVGYYTIPSLDDLAEMVDGNGECIVENFTIGRKGYGSIFFPGEVNLTEL
NLDEIVHFRRKEVIVYPDDKKKPPEGEGLNRRAEVTLDGVWPNDKTTCTQIRSPERLVDM
NYEGRLEKASRKQGARFLEYRPETGSWVFEVTHFSKYGLQDSDEDDEVPPKTDPKKQKTT
MSLPASRLQQLLAPTQQQVALQAQSTVVDLASGVAELDSDMADITQSVLPESMLGAEDED
GELPPADVDTMKLGGVVFPDHELTGSSHIPSSLGINPHTLQIMKASLFTEDEEDGDMFQN
HRTVKVSTDVSSPRLVLPGAPGRPSVGGLLQARFTSGPFPQYSDPSGPARPLSRGSPAVA
DPARPLQWKSPGPASFLLPPHIPEPAIRKVGVRRLGGPVPLKESVTQGKGGLLMDTGLFA
TRSFRVGWGPGWTLAHCGSRISSQTSKQLEYQELGTKTDFSFLPKPSRSKPLTESPYQVV
LEHLVGLEPPQGTTSEEEDSHAMLQRPLEICLKHSAVGVPEGVSCPLVEPQTGVAALHEY
AEWITELNDRQGDLEPILGHWAEVWTLCEALWGQLGPSDQEPGTDPLSEYEQQLQRRRAF
SAWLSHGASCRVEKEVALVGKGRHTEAIFSYLTSSRISEACRLAQKEGDHRLSLLLSQAA
GSRFCRDLLALQLADWNQMQTDHYLTEERLRIFVLLAGKSVWQSSESVVNVCSELDWKRC
VAVHLWYMLPPTASVADALAKYEAAFQGSTEAGRYACAPLPPYQEEELPEEGEESTQPLY
DLCFHLLKLYSDRHYSLQPLLDPLTVTWQRLDYRLSWHLWGVLQALHYTHLSSSRQGLVH
AGYAAQLESAGLWHMAIFILLHIPDHNQRERAVREMLTLHCPLQETEESVRRERFLTERL
LIPERWIHEAKATRAHRDGDRHQQAMHLYRAGYWNQCHRLLIQHLASDCIINDNHDYLLD
FLEGLAVPEHSASIQDWDTSGRVYLDYIRVIKSLQDIQQMENAGYELERLHTDVTSLCSR
IELLPCRTARDRLAQSEMAKRVANILRVVLSLQQGDAAADPLSIPLAQLAPHISRLPMPE
DYTLEELRSLTQSYLRQLIVSQ
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaattcctttggaactcccttcggtggggggactgggggctttggttcctcg
tcaacctttggtcagcaaaacacaggttttgggacaacaggaggttttggaacatctgcg
ttcggggcgaccaccaacactggaggattgtttggctccacacagaacaagcctggcggt
ttgtttggatccagtacatttagccaaccagcgacttcctccaccagtaccggctttggt
tttggtccggccagcggaacgtccaccagcctgtttggaaacacgggaaccggcgccagc
agtggacttttctcccagcagaataatgcgtttggtgccaacaaaccaacttcttttgga
agctttgggacaagtgccagcagcagtggcctgtttgggtccaccaacaccaccaccaac
ccttttggtggctccagttccctgtttggaggctctgggtttgcggcgaatcagcagcca
ggaacaacagtgaaattcaatcctccaacaggaagtgacacgatggtgaaagcaggcgtg
accacaagcatcaacaccaaacatcaatgcatcacagccatgaaggagtatgagaacaag
tctctggaggagctgaggctggaggactaccaggcgggcagaaagggtccgaccaacccc
atcgctccagggacgggcggtctgttcggtggagccacacccacgtccagcgcttcaacg
ggcctgttcggcgcctccgcagccaacaccaactttaactttggggcaaataagtccacg
tttggtgctaccacgggctccttcggaaccaccacagcaggtctgtttgttcaaccgaac
cagcagccagccaatagcctctttaagccctttggagccgccaccaccacccagaatgcg
ggcttcaccttcggcaacaccaacaccacgggtcagcccaacaccagcaacacggggttg
tttggaagcacggcggcttctcaaccggccagcttgttcggaaccaccccgagcggcacc
accactggtattgggacgggcactgggctgttttctctaccaaaccaaactggttttgga
aatgttagcacacagttgtttgggaataaatccaatgtttttggacccaccaccagtgct
ccatctttcggcactgcgaccgggatctttgggaacaagaccactctgactctgggaacc
ggaaccaacccctccacctttggttttggtggcaaccaggctggaggaggaccttttggc
accaagacggccactggtggactgggaaacaactttggaaccgtcggcaccggggcaact
ctgtttggaaacaaccagaacaaactgggcaccacgttgggaacaatgggacctttcgga
accactgttccatttaacagtggagcgagcggtctgggtttcggagcgccgcagcaacct
gtcgctctcactgatccgaacaccagcgccgcccagcaggccatgctgcagcagcagctg
aacgtcctggcctactctccatacggagactcaccgctgttcaggaacccgctgtccgac
ccaaagaagaaggaggagcgtctgaaaccgaccaatccaacggcccagaaggctctgacc
acgcccactcactacaagctgacccctcgacccgccactaaggttcgacccaaagcgctc
acctcctctggagcctctaagtcacagctgtttgacggtctggacgatgacgaaccgtcg
ctcaccaacggagccttcgtgcccaggaagagcatcaagaaactggtgctgaagaacctg
aacagcagtcagtacagcagcagcagtctgaacaaggagaacgacgacctggcctcgcca
tcggactatcctcagaacggacacagccaagcagaggaggaggagatacgggaggttcca
gctgtgagcagccggaccgacgatgaccccgaggtcacccagttctacgtgaaccccatc
gccaagccgattccacaaggccggacccagaccagcctgcaggacaccatcagtgacctg
aacctgcacaagcagtcgaggaacggcctggagctgagcagcaacgacgtgtcggcgtcc
tttggggaggattctctgcatgaagacgaggaggaagaggagcagcagcaggagtctaaa
cagtctcctcatcctgcaggcatcattctgaaccgtgtgggttactacaccatcccctcc
ctggacgatctggctgagatggtggatggaaacggggagtgcatcgtggaaaacttcacc
atcggcaggaaaggttacggttccatcttcttccctggtgaggtgaacttgacagaactg
aacctcgatgagatcgtccacttcaggcgcaaagaggtcatcgtttacccggatgacaag
aagaagccgccggagggggaggggcttaacaggcgggccgaagtgactctggacggcgtc
tggcccaacgataagaccacctgcactcagatccggagccccgagcgcctggttgacatg
aactacgagggccggctggagaaagcttccaggaagcagggagcccgtttcctggagtac
cgacctgagaccggatcctgggtctttgaggtgacccatttctccaaatatgggcttcag
gactctgatgaagatgatgaggttccgcctaaaacggaccccaagaagcagaagacgacg
atgtcacttcctgcttccagactgcagcagctgcttgctcccacccagcagcaggtggcg
ctacaggctcagtccaccgttgtggatttggcgagcggcgtggcggagctggacagcgac
atggctgacatcactcagagcgtcctgccagagagcatgctgggagcagaggacgaggat
ggcgagctgccgccggctgacgtggacacgatgaagctcgggggtgtggtttttccggac
cacgagctcactgggtccagccacatcccgtcctcgctgggcatcaacccacacaccctc
cagatcatgaaggcgtctctcttcactgaggatgaggaagacggcgacatgttccagaac
cacagaaccgtgaaggtgtccactgacgtctcgtcccctcggctcgttctgcccggagcg
ccgggtcgaccctctgttgggggtcttcttcaggctcgcttcacttccggccccttccct
cagtactcggacccttctggtcctgctcgtcctctgtcccgcggctctccagcggtggcc
gaccccgctcgacccctgcagtggaagagtccgggccccgcctctttcctgctgccgccc
cacattccagaaccagcgatccgaaaggtgggagtccggcgcctgggcgggcccgtcccc
cttaaggagtccgtcactcaggggaaggggggtctgttgatggacacgggcctgttcgcc
actcggtccttcagagtgggttggggtcctggctggaccctggctcactgcggcagccgg
atcagctcacagacgtccaaacagctcgagtaccaagaactcggcaccaagacggacttc
agcttcctgcccaaaccgtcccggagcaaaccactcactgagagcccctaccaggtggtt
ctggagcacctggtaggactggaacctccacaggggacgaccagtgaggaagaggacagc
catgcgatgctgcagcgccccctggagatctgcttgaaacacagcgctgtcggcgtccca
gagggagtctcctgtcctctggtggagccgcagaccggcgtggcggcgctgcacgagtac
gccgagtggatcactgagctgaacgacaggcagggagatttggagcccatcctgggtcat
tgggccgaggtctggactctgtgtgaggccctttggggccagttgggtccttcagatcag
gagccaggcacagatccgctcagcgagtacgagcagcagctacagagacggcgcgccttc
tcagcctggctgtcccacggtgcctcctgcagggtggaaaaggaggtggcgctggtgggg
aagggccgtcacacggaggccatcttcagctacctgactagcagccgcatcagcgaggca
tgtcgactcgctcagaaggaaggagaccaccgtctgtccctgctcctgtctcaggctgcc
ggctctcgcttctgccgcgatctgctcgccctgcagctcgccgactggaaccagatgcag
accgaccactacttgaccgaggagagacttcggatcttcgttctgcttgctgggaaatct
gtttggcagtcgtcggagtcggtggtgaacgtgtgctccgagcttgactggaagcgctgc
gtggccgtgcacctttggtacatgttgcccccgacggcatctgtggccgacgccctcgct
aaatatgaagctgctttccagggctccacggaagctgggaggtacgcctgtgcccccctg
ccgccttaccaggaggaggagctaccggaggagggggaggagtctacgcagccgctgtat
gacctgtgtttccacctgctgaaactctacagcgacagacactacagcctgcagccgctg
ctcgacccgctcacagtcacctggcagcgcctggattaccgcctcagctggcacctgtgg
ggcgtcctgcaggcgctgcattacacccacctgagcagctcccgtcagggactcgtccac
gccggctacgccgcccagctggagagcgccggcctctggcacatggccatcttcatcctg
ctgcacatccccgaccacaatcagcgagagcgagccgtcagggagatgctgacgctgcac
tgccccctgcaggagacggaagaatctgtccgcagggagcgctttctgacggagaggctg
ctgatcccggagaggtggatccatgaggccaaggccacgcgggcccacagagatggtgac
cggcaccagcaggccatgcacctgtaccgagccggatactggaaccagtgccaccggctg
ctgatccaacacctggcctcagactgcatcatcaacgacaaccacgactacctgctggac
ttcctggaaggcctggcggtaccagaacacagcgccagcatccaggactgggacacatca
ggaagagtgtacctggactacatccgagtcatcaagtctctgcaggacatccagcagatg
gagaacgccgggtacgagttggagcgtctccacaccgacgtgacgtctctctgcagccgg
atcgagctgttaccctgcaggacggctagagaccgcctcgcccaatcagaaatggcgaag
cgcgtggcgaacatcctgcgggtggtgctgagcctgcagcagggcgacgccgccgccgac
ccgctcagcatcccgctggcccaattggcgccgcacatcagccgcctgccgatgcccgaa
gactacacactggaggagctgcggagcctcacccagtcgtacctgcggcagctcatcgtc
agccaatga
DBGET
integrated database retrieval system
