Girardinichthys multiradiatus (darkedged splitfin): 124876269
Help
Entry
124876269 CDS
T08099
Name
(RefSeq) roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124876269
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124876269
Cell adhesion molecules [BR:
gmu04515
]
Immunoglobulin superfamily
ROBO family
124876269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
124876269
NCBI-ProteinID:
XP_047234867
LinkDB
All DBs
Position
11:complement(31114875..31270273)
Genome browser
AA seq
1539 aa
AA seq
DB search
MPACFTGIYFLLTQLLICSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPSPT
VEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAIS
HNASLEVAILRDDFRQNPVDVMVAVGEPAVLECQPPRGHPEPTISWRRDGTNLDDRDERI
TIRSGKLMITNTRKSDVGKYICVATNMVGERESEIAVLTVLERPTFVKRPSNVVLLADES
VEFHCIVQGDPVPTVRWRKDDSDLPRGRFKILEDHTLIVRQVASSDEGSYTCMAENMVGK
SEASATLTVHVYTVPPTFAVRPRNQVVSVGRTVTFQCEATGNPQPAIFWQREGSESLLFS
YQPPQPFSRLSVSQMGSLTITDVQRPDVGFYICQALNIAGSVITKALLEVTDAGSDHPPP
VIRQGPVNQSVPVDSTVVLGCQTVGAPPPAVHWKKDGTVVSPVDSRVSLMETGSLKIHYA
KLGDTGFYTCVASSPSGEASWTAYLQVEEFGVVVQSGHPEDSNLIPGAPSKPDVSNVSRT
SVTLSWKSSPNPGGSLSSYLIEAFSYTLGNRWVTLAEHVKTEFYVLTNLKPGAVYLFMVR
AMNVYGLSDPSPISDSVRTQDSSSTMQGVDHRHIQRELGDVVIHLHMPTVLSSSTVKVQW
MVEQQSPYIQGYKVLYRVSVEHGQPESHWTILEVRALPEDGVVISQLKKGCIYEFKVRPF
FDEFQGADSEVKVVRTLEEAPRRAPQGVTVTKSDANGTAILVSWKPPQEAGEDGIIQEYK
IWCLGNESRYHVNQSVDSSTFSVLIPSLAPGIRYSVEVAASNGAGPGVKSDVAFFQLDSA
GQMMDVSDKRGTLSQISEVVKQPAFIAGIGATCWLILMIFSVWLYRHRKKRSGVSSTYTG
IRKVPSFTFTPTVAYQRGDSVCGAGRPVPLSMGEPLNQLWLPDNWPNASANHKDCSINCC
NNGNGTSDSNMTTYSQPADCIANYGSHPENKQGGQLGSETPIYSDVNLSNKLTEIKTFNN
SNFCYASPGGDSSGTYEPIPYATTQLIQANIKNKVAAGGCAAECLDIPCWKQPPNLPPIP
KEMAALMQHSTTKQNSNDLQGSEGMIHPKTIPYNRTRNHSTGGSHQSSDKGSNSTSGSQN
QKKGMRPQKIPKHNAVSWGDALSDPHPNVWDCDAYSLPMERSFDPEERINSCPTPPVRGA
ASSATEVPCLPATPSQEDLSNGQQDGAEHFTHTYCSILDTDGPEENEEQVDEETETELSE
NLYSRSQHHLKHKHQPYHISPHKLLLQGLEQTPASSTGDLDRSVTGSMVNSWGSASEDNI
SSGRSSVVSTSEGSFFTDGDFNQAVASSRDIVGLRMGRHSEVPGQRHQRASSPMSTDSNM
SPAVTHKRPRRHKPNQSGQQDYQSKDIFSDDSCMPLNFTSQTSHGDHKVRGATLPRMGSG
QGRCRRGSTGTHRVRDGALEQRESQEMDKIQQGAKGNNKNRQHSEFGDVLLYSRPSFLSG
QAQRESGCNSSNLQSCGGSRTKQEEQVTLTEQAEEFLKT
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttgttttacaggaatttactttctactgactcaactactcatttgttcaggg
tctcgtctccgccaggaagacttccctccccggattgtagaacacccctctgatttaatc
gtgtctaaaggggagccagccacactcaactgtaaggcggagggccgtccatccccgaca
gtggagtggtacaaagatggtgagcgcgttgagacggaccgagacaacccacgctcccat
cgtatgctgctgcccagtggatcccttttctttctacgcatcgtccatggacgacggagc
aagccagacgatggcagctacgtctgcgtggcccgaaactatctgggccaggcgatcagt
cataatgcatccctggaagtagctattttgcgggatgacttcagacagaaccctgttgac
gtcatggtagctgttggcgagcctgcggtgctggagtgccaaccccctcgtggacacccc
gaacccacgatttcctggaggagagatggcaccaacttggatgacagagatgaacgaatc
acaatccggagcggcaagcttatgatcaccaacaccaggaagagcgacgtgggaaagtac
atttgcgttgccactaacatggtgggggagagggagagtgagattgcagtcctcacggtg
ctggagcggccaacctttgtgaagcgccccagcaatgtggtgctattggcggacgagagt
gtggagttccactgcattgttcaaggagaccctgtccccaccgtccgctggaggaaagat
gattctgacctacctaggggcagattcaaaatcctggaggaccacactctgattgttcgc
caggttgcctcttcagatgagggctcctatacatgtatggcagaaaatatggttgggaag
tctgaagcatctgccaccctcactgtacacgtctacacggtgccccctaccttcgccgta
cgccccagaaaccaggtggtgtcagtgggcaggacagtcaccttccagtgtgaggccacc
ggcaacccgcagccggccatcttctggcagagggagggcagcgagagtcttctgttttcc
taccagccaccacagcccttcagccgtctgtctgtctcccaaatgggcagtttaaccatt
acagacgttcagcgccctgacgtcggcttctacatctgccaggctctcaacatagctggc
agtgtcattactaaagctctgctagaagttacagatgctggatcagaccacccccctcct
gtcatcaggcagggtcctgtcaatcagagtgttcctgtagacagcacagtagtactgggt
tgccaaactgttggcgctccgcctcccgctgtccactggaagaaggatggcacagtggtc
tctccagtggactctcgggtgtccctaatggaaacagggtcactgaaaattcactatgcc
aagctgggggatacaggattctacacatgtgttgcttctagtcccagtggagaggcttcc
tggactgcatatctgcaagtagaagaatttggtgttgtcgtccagtctggtcatcccgaa
gattctaacctgattcctggtgctccatctaaacctgacgtttctaacgtcagccgtaca
tctgtcacactgtcatggaagtccagccccaatcctggtggatcgctttcatcctactta
attgaagcattcagttatacattagggaacagatgggtgaccttagcagagcatgtgaag
acagagttctatgttctgaccaacctgaagcctggagctgtttatctcttcatggtcaga
gccatgaatgtttatggccttagtgatcctagtccaatctctgactcagtaagaacacaa
gacagctcctccaccatgcagggggtggaccaccgtcacatccagagagaactgggggat
gttgtgatccacctacacatgccaacagtcctgtcatcttcaactgtcaaggtgcagtgg
atggtcgaacagcagtccccttacatccagggttacaaggtgctttacagggtgtctgtt
gagcacgggcagccagaatcgcactggactattctggaggtgcgtgccctgccagaagac
ggggtggtgatcagtcagctaaagaagggatgcatctacgagttcaaagtgcgacctttc
tttgatgagttccaaggagctgacagtgaggtgaaggtggtcaggacattggaagaagcc
ccgagaagagccccccagggtgttacagtcacaaagagcgatgccaatgggactgccatc
cttgtttcctggaagccacctcaagaggcaggagaggacggaattattcaggaatacaag
atctggtgcctgggtaatgaaagccgctaccatgtgaatcagtcggtggatagctcaacc
ttctctgtgctcattcccagtctggctccaggaatacgctatagtgtagaagtagcggca
agcaatggtgctgggcccggagtcaagagtgacgtagccttctttcaattagattctgca
ggccagatgatggacgttagtgacaaaagaggcactttatcacagatctcagaggtggtg
aagcagccagcttttatcgcaggcattggcgccacttgctggctgatcctcatgattttc
agtgtgtggctctaccgtcaccgtaagaagaggagtggtgtcagcagcacatacacgggc
atccggaaggtcccatcttttacctttacacctacagtggcatatcaaagaggggattct
gtgtgcggcgctggcagacctgtccctctcagcatgggtgagcctctaaaccagctctgg
ctgccagacaactggccaaatgcaagtgccaatcataaagactgcagcatcaactgctgt
aataatggcaatggcacgagtgacagtaacatgacaacatacagccagccagctgactgc
atcgccaactatggaagccatcccgaaaacaaacaaggcggacagcttggttctgagacc
cccatatacagtgatgtgaacctttccaacaagctcactgagattaaaacattcaacaac
tccaacttttgctatgcaagcccaggaggagattcgtcaggcacatatgagcccatacca
tatgccaccacacagctcattcaggccaacattaagaacaaggtggctgctggtggctgt
gcagctgagtgtctggatataccctgctggaaacagccccccaacctgcctccgataccc
aaggagatggcagcattgatgcagcatagcacaactaagcagaactctaacgatctgcag
ggaagcgagggtatgatccacccgaaaaccataccatacaaccggacccgcaaccacagc
acaggaggctcccaccagagttcagacaaaggcagcaacagcacctcagggagtcaaaat
caaaagaaaggaatgcggccccaaaagattcccaaacacaatgctgtgagctggggggat
gctttgtctgatcctcatcctaatgtctgggactgtgatgcgtatagtctgcccatggag
aggagctttgatccagaggagagaatcaacagctgccccactccaccagtcagaggagca
gcttcatctgctactgaagtgccctgcttgcctgccactccatcacaggaagaccttagt
aacggccagcaggatggagctgaacacttcacccacacctactgctcaatactggacaca
gatggaccggaggagaatgaggagcaggttgacgaggagacagagactgaactgtcggaa
aatctctacagccgatcccagcaccacctgaagcacaaacatcagccgtaccacatctct
ccgcacaagctgctcctgcaaggtctggagcagaccccagcctccagcacgggggacctg
gacagatcggtcacggggtccatggttaacagctggggctctgcgtcggaggacaacatc
tcatcgggcaggtccagtgttgtcagcacctcagagggatccttcttcacggatggtgat
tttaaccaggcagttgcctcttcaagggatattgtaggcctgcgcatgggcaggcactca
gaggtgccaggtcagcggcaccagcgagcaagcagccccatgtcaacggacagcaacatg
agtcctgcagtaacacataaaaggcccagacgccataaaccaaaccagtctggacaacag
gactatcaatccaaagatatcttcagtgatgactcttgcatgcctctaaatttcacaagc
cagacgtcccatggtgaccacaaagtgaggggggcaactctgccacggatgggctctggg
cagggccggtgcagacgaggcagcaccgggactcacagggtcagagatggagcacttgag
cagagagagagtcaggaaatggacaagattcaacaaggggctaaaggaaacaacaaaaac
cgacagcattcagaatttggggacgtacttttgtacagtcgtccgtcttttctatcaggt
caggctcagagggagtcgggctgtaattcatcaaaccttcagtcatgtggaggctcaagg
accaaacaggaagagcaggtcaccctcacagaacaggcggaagagtttctaaaaacttaa
DBGET
integrated database retrieval system
