Girardinichthys multiradiatus (darkedged splitfin): 124876351
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Entry
124876351 CDS
T08099
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124876351 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124876351 (pds5b)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124876351 (pds5b)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
124876351 (pds5b)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
124876351 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
TPR_Vitellogenin
PI-TkoII_IV
INTS7_N
HEAT_EF3_N
EnP1_C
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
124876351
NCBI-ProteinID:
XP_047234978
LinkDB
All DBs
Position
11:21342844..21379192
Genome browser
AA seq
1407 aa
AA seq
DB search
MAHSKARATDGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNIVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPFNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNMLRNHVKDLLDLIKKPKSEASSKAVFAKVMVITRNLPDPG
KAQDFVKKLAQVLEDDERIRDQLETLVSPTCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTDEAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGNKMEESFPHIKSVLLPVLQAKAKR
GPPRQAKYAIHCINAMFSNRDTHFAQIFEPLHKSLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVSDDEVSPETMAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFAQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHARQ
CLVKNVNIRREYLKQHAAISDKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENIKQTKDAQAPNDPKTNEKLYTVCDVAMHIIMSKS
TTYSLESPKDPVLPSCFFTKPDKNFSNTKNYLPQEMKAFFTPGKPKSANVLGAVNKPLSS
AGKQLQSKASRMETTSNHDSSPNPSSPQRSKTRHDSTEMDHSENEDFSLKISDSVDKEIE
KPRGRKRGVASSDDQESKPKRGRKRTSANTTTAAESEDQWDEDNRPEDEQNSPPKKGRRG
RPPKSATSNQETPAKGRRGRKKAAPPPEEDDEENEEEEEEERVDEEDEDDGDDKSSENME
VKPKGGRQVRTPRRTQGSESAESTPQKRRGRPPKSAQPAAKKPTRGGRSKAVAAKDDSEE
EEEEEEEEEQDDEPAPRGRKKTAGRRR
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccacagatgggaaggtgacctaccccccgggggtcaaa
gagatttctgacaaaatatccaaagaggaaatggtccgcaggctcaagatggttgtgaag
accttcatggacatggaccaagactctgaggaagaaaaggagctttatctgaacttggcc
cttcacctggcctcggacttctttctcaaacacccagacaaagatgtgcggctgctggtg
gcgtgctgtcttgcagatatattcaggatttatgctccagaagcaccctacacctctcca
gataagctcaaggacatttttatgttcataacacgacaactcaaaggactggaggacacg
aaaagcgctcagttcaacagatacttctacttgctggagaacatagcttgggtgaaatct
tacaacatttgcttcgagcttgaagacagcaatgaaatattcacccagctttacagaaca
ctcttccaggtcataaacaacgggcacaaccagaaagtgcacatgcacatggtggacctg
atgagttccatcatctgcgagggcgatacggtatcacaggagctgttggataccgttttg
gtcaacctggtgccggcgcacaagaatttaaataaacaggcctatgacctggccaaagct
ctgctgaagaggaccgctcaagccattgaaccttacatcaccaatttcttcaaccaggtt
ctgatgctgggaaagacctcggtcagtgatctgtctgaacacgtgtttgatctcatcttg
gaactttacaacatagacagccatcttcttctctctgtgctgcctcagctagagtttaaa
ctcaagagtaatgacaacgatgagagactgcaggtggtgaagctgcttgcaaagatgttt
ggagccaaggactcggagctggcggcacaaaacaaaccgctctggcagtgttacctgggc
aggtttaatgacatccacgttcctatcagactggagtgtgtgaagtttgcgagtcactgt
ctcatgaaccacccagacctggccaaagacctcacagaatatttgagggtcagatcacat
gaccccgaggaggccatccgccatgacgtcatcgtctctatagtaactgcggctaagaaa
gacctgtcccttgtcaatgatgcgttattaaatattgtaaaggagagaaccttggacaag
agatggcgtgttcgtaaggaagccatgatgggcctagcatctatttacaggaagtactcg
ctacaaggagagggtgggcgggaagcctctaagcagatatcctggattaaagacaaactg
ctccatatctactaccagaacagcattgatgacaggttgctggtggaacgggtttttgcc
cagtatatggttcctttcaacctggaaaccactgagagaatgaagtgtctctactacctt
tatgctacattagacaccaatgctgtcaaagctttaaatgagatgtggaagtgccagaac
atgctaagaaatcatgtcaaagacttgctggacctgatcaaaaagcccaagtcggaagca
tccagtaaggctgtatttgccaaagtcatggtgatcacaagaaaccttccagacccgggc
aaagcgcaggactttgtgaagaagctggctcaggtcctggaggatgacgagcggataagg
gatcagttggaaaccttggtcagccccacctgctcctgcaagcaggctgaagtctgtgtg
cgagacatcactaaaaagcttggtagccccaagcaacccagcaatccgttcctggaaatg
gtgaaattcctgttggagcggattgctccggtacacatcgacacggagtccatcagtgct
ttaataaaacaggtgaacaaatctatagatgggacggctgacgacgaggaggagggtgtt
cctactgacgaggccattagggccggactggagctgctgaaggtgttgtccttcacacac
ccagtgtcattccactctgcagagacgttcgagtctttgttgggctgtctgaagatggat
gatgaaaaagtggcagaagctgccctgcagatcttcaagaacacaggcaacaaaatggaa
gagagtttccctcacatcaaatctgttttgctgccggtactgcaagccaaagctaagagg
ggcccccctcgccaggccaagtatgccatccattgcatcaatgcgatgttcagcaacagg
gacacacactttgcccaaatttttgagcctctgcacaaaagtctggaccctgctaacctg
gagcagctcatcactcctttgaccactctgggtcatctggcccagctggccccagaacaa
tttgctgcaccgctaaaatctctagtagctaacttcattgtgaaggatctgctcatgaac
gacaggatcccaggcaagaaaacaaccaaactttgggtttctgatgacgaagtgtcccca
gagacgatggctaagatccagggcataaagctgatggtgagatggctactgggagtgaag
aacaaccagagcaaatcaggcaactccaccctgaggatgctgacagctattctgcacagc
gatggagatctaactgagcagggtaggatgggtaaaccagacatgtcgcggctgcggctg
gcggcagcgtgtgctctgctgaaactggcacaggagccctgctatcacgaaatcatcacc
ctggagcagtatcagctctgtgctctcgttatcaatgacgagtgctaccaggtgcgacag
tgttttgcccagaagcttcatcggggcctctgtcgcctccgtctgcctctggagtacatg
gccgtgttcgctttgtgtgccaaggaccccgtcaaggagaggagagctcacgctcgccag
tgcctggtgaaaaatgtcaacataagacgagagtatctgaaacagcacgcggccatcagt
gacaagttgttgtctcttctacctgagtatgtggtgccctacaccatccaccttctggcc
catgacccagattatgtgaaagtgcaggacatcgagcagctgaaagaaatcaaagaagct
ttgtggttcgtccttgaaattatcatggccaagaatgagaacaacagccacgcattcatc
aggaaaatggtggaaaatatcaagcaaacaaaagacgcccaagcccctaatgatcctaaa
actaatgagaaactctacaccgtctgtgacgtagccatgcacatcatcatgtcaaagagc
accacctacagcctggagtctcccaaagaccctgtgctgccttcatgcttcttcaccaaa
ccagacaagaattttagcaacactaaaaattaccttcctcaagagatgaaagcattcttc
acaccaggaaaacccaagtcggcgaatgttttgggtgcagtaaacaagccgctctcatcg
gcgggtaaacagctccagagcaaagcctctcgtatggaaacgaccagcaaccacgactcc
tcgcccaatccgagctccccgcagcgcagcaaaaccaggcatgacagcacagaaatggat
catagtgaaaacgaagacttcagcctgaagatatcagacagtgttgacaaggaaatagag
aagccccgcggccgtaaacgcggtgtggcatccagtgacgaccaggagagcaagccaaag
cgcggacgcaagaggacgtctgccaacaccaccacagcagctgagtcagaggaccagtgg
gatgaggacaaccggccagaggacgaacagaacagcccacctaaaaaaggacgcaggggg
cgaccccctaagtccgccacttccaaccaggaaacgcctgcaaaggggaggcggggccga
aaaaaggcagcacctccgccagaggaagatgacgaagagaacgaggaggaggaagaagag
gagagggtggatgaggaggacgaggatgatggggatgacaagagtagtgaaaacatggaa
gtgaaacctaagggaggaaggcaagtcaggacgccacgaaggacacaaggctcagagtct
gcagagtccacgccacagaagaggagaggacgtccgcctaaatcagctcagccagcagca
aagaaaccaacgcgtggagggcgatcgaaagctgtcgctgctaaagatgactccgaggaa
gaagaggaggaggaggaggaggaagagcaggacgatgagccagcaccaaggggtcgcaaa
aaaacagctgggcgaagaagatga
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