Girardinichthys multiradiatus (darkedged splitfin): 124876582
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Entry
124876582 CDS
T08099
Symbol
scaf4a
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124876582 (scaf4a)
03041 Spliceosome [BR:
gmu03041
]
124876582 (scaf4a)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124876582 (scaf4a)
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
124876582 (scaf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124876582
NCBI-ProteinID:
XP_047235440
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All DBs
Position
11:22829841..22846743
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AA seq
1180 aa
AA seq
DB search
MEAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNITGTFENLCLCPVEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSGSGAASITNAEEPGSSPSPAKEPVNVVTANCTPTPAPPLDNS
DAFAAVAQLFQSSQGQQLQQMLQNFQQQAVKPETNAQPPLPTAQTPVQSVPTGLAAVAPQ
PPLPSPQPPPPTQTAQQKSAFDTKLLDRFDYDDEPDVGEEAKKDETSSQQPFMQQPPAFP
QHMEHFNTQMMNISQDLTQQVPVPPNGQLQAGVVLPGQSFPVAMPTMGHSLPGQTLPGSA
GHSGFPGAYPSQNAAHQHQDSSVDMDHSSMRDSRHGRRSHSGSRSPKRRRSRSGSRSRRS
RHRRSRSRDRRHHSPRSRSQERREREKERERRQKGLPPPKSEALSICSTTLWVGQLDKRT
QQQDVASLLEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGSFKVNQKAIKIAW
ALNKGIKPDFKQYWDVELGVTYIPWSKVREDQLEELKEGGMLDMDTLSPDWTSLRKTLDH
PEEATHNGRSEQQQPEEKQVIPMAVAAAPPVQIPSLQQPMVGMGSLQPPVFPGPIGMPPP
GFTPGIPPPPFIRPGFNPLQMPPGFPPSVPMPLGPPPLSKGGVDDPPQDPAGLGAKKNDE
VLEGQNLFNNQMGHLAGPPGGFPGGHLTNSTGGPPVGLLVGHPGGPPVGHPGGPPVGHPG
GLPVGHPGGPPVGHPGGPPVGHPGGPPVGHPGGPPAGPPGPGGHPGNIQAPSGGLLGARP
GMIPLQRPQVPPLSQMQRFPPPHGPRPPHPNMPPGPPQMIPRGPHPPMMRHKPPQAKGGF
GMPPQHNMRGPFPRGHGPSPQGPAPFIRPGGPRSFEGQEEMDDRQLRGDRPGFRDREQER
DRDWDRDRERDRGFGGGRRFVDAGRGGGSDKMDGRDRLGGWQEDIGSPRGGGWERDRDRD
RDRDRRDWRERRGSLDRERERGRGDDGERDRGRAEGGERSRGEAGSRDKARAPEGKGDKP
RRAERRERTSRWDKDDRLAELENMDKFRSSNSTEQSGVTPSVTVETRKEPNEEPTKKKDE
SEHLPAEATPAAENPPPSEPKEPAQSEPSETKEAAAAASS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaacgcctttaaccaggagttattctccttgatggactctaagcctcct
atatctcgagctaagatgatctccatcaccaaatcagccataaaagctatgaaactctac
aaacacgtggtccagattgtggaaaagtttatcaaaaagtgtaagcctgagtataaagtc
gcgggcctgtatgtggtggattccattgtcaggcagtccagacaccaatttggtccagat
aaagacgtttttggtccgaggttcaccaaaaatatcactggaacgttcgagaacctttgt
ctctgccccgtagaggaccggagcaagattgtgcgggttttgaacctttggcagaagaac
ggagtgtttaagatcgaggttatccagccgctcttggacatggctgctggctctggcagt
ggtgctgcttccatcacaaacgcagaagagccaggttcctcgccatctccagccaaagag
cctgttaatgtagtaacagccaactgcaccccaacacctgcccctccgctggacaactct
gacgcctttgctgctgtagcgcagctcttccagtcctcgcagggtcagcagcttcagcag
atgcttcagaactttcagcagcaggcggtgaagcctgaaaccaatgctcagcctcctctg
ccgaccgctcaaacaccggtccaaagtgtgcctacaggcctggctgcagttgctcctcaa
cctcctcttccctcgccacagcctccgccacctacccagactgcccagcaaaaatcagct
tttgacacgaaactgctggaccgttttgattacgatgatgaaccagacgttggagaagaa
gctaaaaaggatgaaacatcctcacagcaaccttttatgcaacaacctccagcctttcct
cagcacatggagcactttaatacacagatgatgaacatctcacaagacctcacacaacag
gttcctgtgccccctaacggccagctgcaggccggtgttgttctgccgggacaaagcttc
cctgttgccatgccgacgatgggtcattctcttccagggcagacccttcctggttcagct
gggcattcaggcttcccaggggcatacccttctcaaaatgctgcccaccaacatcaggac
tcctcagtggatatggaccattcatccatgagagatagccgacatggtcgacgctcccac
tcaggctcgagatctccaaagaggagacggtctcggtccggttcccgctcacggcggtcc
aggcacaggcgatctcgctctcgagatcggcgtcaccactcacctcgctctcgctcacag
gagcgccgggagagggagaaagaaagagagcgtcggcagaaaggcctcccgccacccaag
agcgaggctctgagcatttgtagtacaacactgtgggtgggtcagctggacaagagaact
cagcagcaagatgtcgcctcattgcttgaagagtttggacagattgaatctattaatatg
attcccccacgtggctgtgcttacattgttatgatacataggcaagatgctttcagagcg
ctgcagaagctcagtagaggatcgtttaaggtgaaccagaaagcaattaagattgcttgg
gctttgaacaagggtataaagcctgattttaaacagtactgggatgtggagctgggtgtc
acctacataccgtggtctaaagtcagagaggaccagttggaggagctgaaagagggagga
atgctggatatggacaccttatcaccagactggactagtctgagaaagaccttggaccac
cctgaggaagccacacacaacggccgttctgagcaacagcagccggaggagaaacaagtg
ataccgatggctgtcgccgctgctcctcctgtacaaatcccttcattgcagcagccaatg
gttggcatgggttctctccaacctccggtctttcctggtcccattgggatgcctccgcct
ggctttactccaggcattcctcctcctcctttcatcagacccggcttcaacccgttgcaa
atgcccccaggttttcctccctcagtacctatgccccttggtcccccacctctttccaaa
ggtggagttgatgacccacctcaagacccagcaggtctgggcgccaagaaaaatgatgag
gtccttgagggtcaaaacttatttaacaaccaaatgggccatttggcaggacctccagga
ggttttccaggtggacatctaactaattctactggtggtcctccggttggtcttctagtc
ggacacccaggaggtcctccagtcgggcatcccggtggtcctccagtcgggcatcccggt
ggtcttccagtcgggcatcccggtggtcctccagtcgggcatcccggtggtcccccagtc
gggcatcccggtggtcccccagttgggcatcccggtggtcctccagctggacctccaggt
cctggtggacaccctggaaacattcaggccccctctggtggtctgctcggtgctaggcct
ggtatgatcccacttcagcgcccccaggttccaccactatcacaaatgcagcgtttccct
ccaccgcatggaccaagaccacctcaccccaacatgccccctggccctccacagatgata
cccagggggccacaccctccaatgatgcggcacaagccaccacaagctaaaggaggattt
gggatgccgcctcaacataatatgagaggtcccttccctcgtggacatggtccatctcct
caaggtcctgctccgtttataagaccaggtggtcctagaagcttcgaagggcaggaggaa
atggatgaccgacaactcaggggagacaggcctggattcagggatcgagaacaagagagg
gacagagactgggatcgagacagagagagggacagagggtttggaggtggaaggcgtttt
gttgatgcagggagaggaggtggtagtgacaaaatggatgggagggacaggctcggaggt
tggcaagaggatataggaagtccccgtgggggagggtgggagagagacagagaccgtgat
cgggacagagatagacgggactggagggagaggcgaggcagccttgatcgagaaagagaa
cgagggcgtggtgatgatggggagagggatcgagggagagcggagggaggagaaagaagc
aggggagaagcagggagccgggacaaagccagagcacccgaaggcaaaggagacaaaccg
aggcgggcagaacgacgagagaggacgtcacggtgggataaggatgatcgactggccgaa
ctggaaaacatggacaagttccggagctctaacagcacagagcaatctggtgtcactcct
tcggttacggtggaaaccaggaaagagccaaatgaggaacccactaaaaagaaagatgaa
tcagaacatttacctgcagaggcgactccagctgctgaaaatccaccaccctctgagcct
aaagagccggctcaaagtgagccctcagaaacaaaagaagcagcagcagcagcatcatcg
tag
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integrated database retrieval system
