Girardinichthys multiradiatus (darkedged splitfin): 124876611
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Entry
124876611 CDS
T08099
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124876611 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124876611 (ddx46)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124876611 (ddx46)
Spliceosome [BR:
gmu03041
]
Complex A
U2 snRNP components
U2 related factors
124876611 (ddx46)
Complex B
124876611 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
124876611
NCBI-ProteinID:
XP_047235489
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All DBs
Position
11:2049453..2063559
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AA seq
1062 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDNKRSKKDDRDRNRRDRSRSRDRRRSRSRDRKR
PRRSRSRERRRSRSRERKRSLSRSRTRRSRSGSPAKSKKTDEKAKGTEKESVEPVSEKKK
VKEEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKRELEEMKQGK
KWSLEDDDDDDEEGPALMEGDDEDDGDGKEEGKDKDAEEVKKEEGEDEKETPMEQQAEED
EVDPLDAYMEEVKQEVKKFNIGPMKGNDKKGATTVSNVVTVVKTKKQPLMHKKKGELMEN
DQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHAKIQYEPYRKNFYVEVPELAKMTT
EELNAYRLELEGIIVKGKGCPKPIKTWVQCGVSMKILNSLKRHGYEKPTPIQAQAIPAIM
SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEAEGPISVIMTPTRELALQITKECKK
FSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVV
LDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILGKPIEVQVGGRS
VVCSDVEQHVLVIDEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCL
SLHGGIDQYDRDSIINDFKTGVCRLMVATSVAARGLDVKQLILVINYNCPNHYEDYVHRA
GRTGRAGNKGYAYTFITEDQARYAGDILKALELSGSPVPPELEQLWASFKDQQKAEGKVI
KSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEEGALDIEEQIESMFNSKKRV
KDLSAPGAAGGPAGTVTAAAATPGGVAGVAPTSAGNNQKLEIAKKLALKINAQKNLGAEA
QDVMQQATNAILRGDPIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAETV
KRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLA
IESASELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcgagacactacagaaagcgttcagcgtcccggggacggtcgggcagc
cgatccaagagtcggtccccggacaacaagcgctcaaagaaagatgaccgagaccgaaac
aggagagataggtccaggagcagagaccgcagaaggtcccggtccagagacaggaaaaga
cccaggcggtccaggagcagagaaaggaggaggtccagaagccgggaaaggaagagatca
ctcagtcggagccgaactcgcaggtcccgatccggcagcccggcaaagagcaagaaaaca
gacgaaaaagccaaaggcacagagaaagagagcgttgagcctgtgtccgagaagaaaaag
gttaaagaggagaaagaagatgagaaggtcgaggaccaagactttgaccagaacaaactg
gaagaggaaatgagaaagaggaaggagcgggtggagaaatggagagaggagcagaggaag
aaggctattgaaaacattggagagataaagagagaactggaagaaatgaagcagggcaag
aaatggagccttgaggacgatgacgatgatgatgaggaaggtcctgctctcatggagggg
gatgatgaagatgacggggatggaaaggaggagggaaaagacaaggatgcagaggaagtt
aaaaaagaggagggtgaggatgagaaggagactcccatggagcagcaggccgaggaggac
gaagtggatcctctagatgcgtacatggaggaggtcaaacaggaggtgaagaaattcaac
ataggacccatgaaaggaaatgataagaaaggtgcaacgacagtatccaatgtggtgacg
gtagttaagaccaaaaaacaacccctcatgcacaagaagaagggtgagctgatggagaac
gaccaggatgccatggagtactcatcagaggaagaggaggtggacctgcagacggctctt
acaggctttcagaccaaacagaggaaggtcctggagcctgtggaccacgccaaaatccag
tatgagccataccgcaagaacttctacgtggaggtccctgagctggcgaagatgaccaca
gaggaactgaacgcatacaggctggaactggaaggtataattgtcaaagggaaaggctgt
cccaaacccatcaagacatgggtgcagtgtggggtgtcgatgaagatcctcaactccctg
aaaagacatggctacgagaagcccacaccaatccaagcacaggccatccctgccatcatg
tcgggtcgagatctcatcggcatcgctaagactggcagcgggaaaaccatcgccttcttg
cttcccatgttccgacacattatggaccagaggcctctggaggaggcagaggggcccatc
tctgtaatcatgactcctaccagagagttggctctgcagatcacaaaggagtgcaagaag
ttctccaaaccactgggactcagggtggtgtgtgtttatggagggacaggaatcagcgaa
cagattgcagagctgaaacgaggagcagagatcattgtgtgcacaccaggaagaatgatc
gatatgctgggggccaacagcggccgggtaaccaacctgcggagggtcacgtatgtggtg
ctggacgaagcagacaggatgtttgacatgggcttcgagccgcaggtgatgcgtattgta
gacaatgtgcgtcccgaccgacagacggtcatgttctcagccaccttccccagagccatg
gaggcgttggctcgcaggatccttggcaagcccatcgaggtgcaggtgggaggtcgcagt
gtggtctgctctgatgtggagcaacatgtgctggtgattgatgaggagaaaaagttccta
aagctgctggagattttgggtcactaccaggagaagggatctgtcatcatttttgtggac
aaacaggagcacgcagacggactgctgaaagatctgatgaaagcctcgtacccctgcttg
tctttacatggaggcatcgaccagtacgaccgagacagcatcatcaatgattttaagact
ggagtgtgtcgtctgatggtggccacgtctgtggcagccaggggtctggacgtcaagcag
ctcatcctggtgatcaactacaactgcccaaaccactatgaggactacgtccacagggcg
ggacgcacaggcagagcgggcaacaagggttacgcctacaccttcattacagaggatcag
gcacgctatgctggtgacatccttaaggccttggagctgtctggctctcctgtccctcca
gaactggagcagctttgggcctcctttaaagaccagcagaaggcggagggtaaggtcatt
aagagcagcagtggcttctcaggaaaagggttcaagttcgatgagacagaacacgccctg
gccaacgagaggaagaagctacagaaagccgcactcggattgcaggactctgatgatgag
gagggagccttggatatcgaggagcaaatagaaagcatgtttaactccaagaagagggtg
aaggacctgtctgctcccggtgcggctggcggtccggctggaaccgtgacggctgcagcc
gccacacccgggggggtggctggcgtcgctccgacatctgctggaaacaaccagaaactg
gagatagccaaaaagcttgctctcaagatcaacgctcagaagaacctaggtgccgaagct
caggatgtgatgcagcaggccaccaacgccatcctgcgcggcgaccccatcatgacacca
tccgtgtccgccaagaccatcgcggagcagctggcggagaagatcaacgccaaactgaac
tacacacctgtggagaagctggaggaggagcggcaggcggctgagcaggcggagactgtc
aagagatatgaagaagagctggagatcaacgacttccctcagacggccagatggaaggtg
acgtctaaagaggctttgcagaggattggtgaatactctgaagctgccatcaccatcaga
ggaacatatttccctccaggcaaagagcccaaggagggagaacgcaagatctatctggct
attgagagtgcaagtgaactggctgtgcagaaagccaaaactgagatcacgcggctaata
aaggaagagctcatcagattacaaaattcctaccagccaacaagcaaaggtcgttacaag
gtcttgtag
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integrated database retrieval system
