Girardinichthys multiradiatus (darkedged splitfin): 124876699
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Entry
124876699 CDS
T08099
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124876699 (zc3h12b)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124876699 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
PRORP
UBA_N4BP1_C
PRD_Mga
Motif
Other DBs
NCBI-GeneID:
124876699
NCBI-ProteinID:
XP_047235624
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Position
11:32400696..32418592
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AA seq
850 aa
AA seq
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MTAWSMVEKLKMEKRPCREQNIDSREAQYATDDSEAGSSSESESEEQQWRQQQPYRAQLG
NNGCRRRDPLAVTKPHRQLCRSPCLDRPSFSQSSTLQDFREDDVGAMPGIKPTSGKEYQT
KMEFALKLGYSGDQVETVLNKLGAAALINDILAELVRLGNKAEHEAQPCSSTATSISRPP
CVNETASPEVSVEEESVDMYDNLRPIVIDGSNVAMSHGNKEVFSCRGMQLAVEWFREKKH
KDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKL
AYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFL
RKKPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEG
ALAKCGTGPAAVKGDISSEAKRVAPKRQSDPSIRSVACEPPEALSVARKSETNSVPSLVS
ALSVPTMQPAKSHAAGALNTRSASSPIPGSLQFAHNSLEHMSSVQYPPILVTNSHGASVT
YSDQFPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRNPSHCPESCLSH
SNSDSFSSYGDLYPSSVDSSLEESIKGQQQAPAQARMQAFSHGFRHEALTRVQSYGQEEP
KQGPRKQSGAHLAPHIQHAVVGARSSCPGDYPLTQNILPPLSSQPTRSLGMTRMDSISDS
RLYDSNPNRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKM
EQIWNLPWENPSAAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAA
VIVTKLRSCH
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggagcag
aacattgactcgagggaggcccagtatgccacagacgactccgaggctggaagcagctcc
gaaagcgaatcggaggagcagcagtggcggcagcagcagccctatagggctcagctgggc
aacaacggctgtaggaggagagatcccctggctgtcaccaaacctcaccgtcagctctgt
cgctctccgtgcctcgaccggcccagcttttcccaaagcagcaccctgcaagactttcgc
gaagatgatgtcggtgccatgccggggattaaacccaccagtggaaaggagtaccaaacc
aagatggagtttgctttaaagctgggctactctggagatcaggtggagacggtgctcaac
aagttgggggccgcagcgctcatcaacgacattcttgctgagttagttcggcttgggaat
aaagcagagcacgaagctcaaccctgcagcagcacggccacatccatatcacggcccccc
tgtgttaacgagaccgctagtcctgaagtttcagtcgaagaagaatctgtggatatgtat
gataaccttaggcccatcgtcattgatggttcaaacgtggcaatgagccacgggaacaaa
gaggttttctcttgtcgtggtatgcagcttgccgtcgagtggtttagggagaaaaaacac
aaagacatcactgtgtttgtccccgcctggagaaaggagcagtcgaggcctgacgcccta
atcacagatcaagaaatcttgcgcaaactggagaaagagaaaatcctggtttttacccca
tctcgaagagttcagggcaggagagtggtgtgctacgatgatcgcttcatagtgaagctg
gcttacgattctgatggaattattgtgtcaaatgacaactacagggacttgcaaaacgaa
aagccagagtggaaaaaatttatagaagagcgcctcttgatgtattcatttgtcaatgac
aagtttatgccacctgatgatccattgggaagacatgggccaagcttagaaaatttcctc
cgcaagaagcctgttgttccagagcacaaaaagcaaccttgcccctatgggaaaaagtgc
acatatggacataagtgcaaatactatcatccagagcgagtgaaccaaccacagcggtcc
gtggctgacgagctccgggcatttgctaaattatctgcagtaaaaacaatgagcgaaggg
gctttagctaaatgtggtacaggtccagcagccgttaagggggacattagctccgaagcc
aaacgcgtggcacccaaacgccagtccgatcccagcatccgctcagtggcctgtgaacct
ccggaggcgctctctgttgctcggaagtctgagacaaattccgtgccttccctggtgtct
gccctcagcgtgcccaccatgcagcctgccaagagccatgcagccggggccttgaacaca
cgatcagccagcagccccattccaggctctctgcagtttgcacacaactctctagagcac
atgtctagtgtacagtaccctccgatattagttaccaacagtcacggcgcctctgtaaca
tacagtgatcagttcccaaagtatgactctgttagtgatcatggatactattcactccac
agcgatttctccaacatgagcatgagcagcatgcacaacgttgacagtttctgtagcatg
gagcacgagcacgtgtatcagagaaatcccagccactgccccgagtcttgcctcagccac
tcaaacagtgactcgttttcctcctacggggacctgtacccaagctctgtggacagcagc
ttggaagagagcatcaaggggcaacagcaggctcctgcgcaggctagaatgcaggccttc
tcccatgggtttcgtcacgaagcactgaccagagttcagagttatggccaagaagagcct
aagcaaggtccccgcaagcagtctggggcacacctagcacctcacatccagcatgctgtg
gtgggagcccgctctagctgtcctggagactacccactcactcaaaacatcctcccacct
ttgtcctcgcagccaacacggtctctaggtatgacacgtatggacagcatatcagactct
aggctgtacgacagcaatccaaatagacagagacgaccgccgctgtgccgcgagcagcac
gcgagctgggacccgttgccttgtggcaacgagtcctacggatatcactcgtatccactc
agtaacagcctgatgccatgttgcgagcgggtgatggtccgtagcatgccagacaaaatg
gaacaaatttggaacttgccgtgggagaacccatctgcagccgagcaccaagagcggtac
gtcattccagatcaccagtatcaaacatacaggaacctttgtaacatctttcctgcatac
atagtccactcggtcatggaaaagaaccctcatttgacagatccacaacagctcgcagct
gtcattgttacaaaattgcggtcatgccactga
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