Girardinichthys multiradiatus (darkedged splitfin): 124876880
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Entry
124876880 CDS
T08099
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124876880 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124876880 (taf6)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124876880 (taf6)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124876880 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
124876880 (taf6)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124876880 (taf6)
STAGA complex
124876880 (taf6)
TFTC complex
124876880 (taf6)
SAGA complex
124876880 (taf6)
SLIK complex
124876880 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
124876880
NCBI-ProteinID:
XP_047235863
LinkDB
All DBs
Position
11:complement(34447983..34455325)
Genome browser
AA seq
637 aa
AA seq
DB search
MAEERRQKQCSVSLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVEPSIPENPPPASKEQQKAESTEPLKVVKPGQEEKGAIQG
KGQSTPAPDNKGKEKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTLTKSLLDDKT
QWTTRYGSIAGLAELGPDVIKTLILPRLAVEGARIKAVMEGPVVSNIDKIGAEHVQSLLL
KHCASVIAKIRPQPDNVEQYRTDYGYLGPMLCSHVMKARTQAALQAQQVNRTTLTITQPR
STLSVSQSGLSGSGGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPATKYIVMGTSAGAAST
QQVITLSSSHSASPVTSTVPSATSTLQSLVKLEPGSGPGLTASRPLQKYIVVSLPSSASS
LEGKSSVLPTSISSATVDGGIKLERSDSPAASTQSPH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgtcggcagaagcaatgttcggtcagcctgcccacagagtccatgaag
gctatggcagagtcggtaggagtggggcagttacaagaggaaagctgtgtggcccttagt
gaagaggtcagctacagaatcaaagaaattgcacaggatgctcttaaattcatgcatcac
gggaagagacgtaaactaaccaccagtgacatagacaatgctctgaaacttaaaaatgta
gagcccttgtatgggtttcagtcgcaggagtttatccctttccgctttgcaagtggtggg
ggaagagagcttcatttctacgaggaaaaggaggtcgacctcagcgacattataaacaca
cctcttccaagggttcctttagatgtttctctcaaagcacactggttaagcattgaagga
gttgagccgtcaattccagaaaacccaccaccagcatctaaagagcaacagaaggctgaa
tcgactgaacccctcaaagtggtcaagcctggtcaggaggagaaaggtgctattcaagga
aaaggtcaaagcacaccggctcctgataacaaaggaaaggagaagggtctaatcaggttg
aaaccacgcagcacccatgagctttctgtagaacagcaactttactataaggaaatcacg
gaagcatgtgttggctcctgtgaagctaaacgagctgaagcgttacagagtattgctaca
gatcccgggctgtatcagatgcttccaagattcagcaccttcatttctgaaggagtccgt
gtaaatgtggtgcaaaacaacttggctctgctgatttatctcatgcggatggtcaaagct
ctaatggacaaccccactctgtatttggaaaaatatttgcatgagctgatcccagcggtg
gtcacctgcattgtgagtaagcagctctgtttacggccagatgtcgacaaccactgggct
ttacgggactttgcagctcgcctgatggcccaaagttgtaaaacattcagcacaaccacc
aataatatccagtcccgtattaccaaaactctcaccaagagtttgttggatgacaaaacc
cagtggacgacccgatacggctccatcgcagggctcgctgaactgggacctgatgtaata
aagacgctgatccttcctcggctcgctgtagagggtgctcgcatcaaagccgtgatggaa
gggcctgtagtctccaatatcgataagataggagctgaacatgttcaaagcctcctgctg
aaacattgtgctagtgttattgccaagatacgacctcagccagacaacgtggagcaatat
cggacggactatggctacctcgggcccatgctgtgttcacatgtaatgaaggccagaact
caagcagcactgcaagctcagcaagtcaaccggactaccttaacaatcacacagcctcgt
tccaccctttccgtctcacagagtgggttaagtggatcaggagggcctcgcactcccagc
atcattaaggtcccaagctccctcaccctcatgtccccgagacccggtactccgtcacaa
ccatcgccaccggcgacaaaatatattgtaatgggaaccagtgcaggagctgcctcaacc
cagcaggtcatcacccttagctcttcccactcagcctcaccagtaaccagcaccgttccc
agtgcgacttcaacactgcagtccttggtaaaactggagcctggcagcggtcccggactc
acggcttcacggccattgcagaagtatatagttgtatctcttccctcgtctgcctcctct
ttagaaggcaagagctctgtgctaccgacctcaatttcctcagccacagtcgacggaggt
ataaagctggagcgctccgattcccctgcagcaagcacacagtccccacactga
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integrated database retrieval system
