Girardinichthys multiradiatus (darkedged splitfin): 124877319
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Entry
124877319 CDS
T08099
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124877319 (cacna1ba)
04020 Calcium signaling pathway
124877319 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124877319 (cacna1ba)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124877319 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
124877319
NCBI-ProteinID:
XP_047236377
LinkDB
All DBs
Position
12:complement(1722309..1873000)
Genome browser
AA seq
2339 aa
AA seq
DB search
MARFEDEASSRFRGSGPPGPARGANRQPGPPGGQRMYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPASDKTPLSE
RLDDTEPYFIGIFCFETGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYIGK
FHRTCFRIDTKEQVADFPCGLEPPARTCGNGTVCEEYWLGPNFGITNFDNILFAILTVFQ
CITMEGWVDILYNANDASGYMWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKHNPNSVLKR
TKKSKNDLINAEEGEDHFTDISSVGSPFARTSVKSKNDSSSYLRRKEKRIRFAIRHLVKS
QTFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLAEMTMKMYGLGPQNY
FHSSFNCFDFGVIIGSIFEVVWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVS
LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILT
GEDWNAVMYHGIESQGGVHGGMFSSIYFIILTLFGNYTLLNVFLAIAVDNLANAQELTKD
EEEQEEAISKKLALQKAKEVQEVSPMLAANISITTSYVCTPVHHYLSKELQRPVKTMSVW
EQKASQLRRHNQASCEALYDPEECVHLPSGLHIRPDTKTHLDRPLVVGHSDGPLVGGHQH
HHHNPSTPEEAETVTDPSSAPPHSHYPHRHHRHRDRGRAKVKEEPNDNGDNGKNGRQHVH
HSHSKNHEYSRRQEGKTDRSCSKDGGGEYHHHSSMDDSAGGGATREKEHRHHHSHRRSRG
GNGTVNSGERGERRLHHKYGRPSNKNGDRESKKRRHYTHGSRSQSRAEGEESNEREETHT
NRFGDSERESLVISQQLGSLGAPGQPEDSDNQKNVRRTGQTSIHIPPVTITSPGETTLIQ
MNITDNESIPINEKNFRKDQCHSGPRPILPYSSMFIFGQTNPVRRLCHYIVTLRYFEMSI
LVVIAMSSIALAAEDPVWTNAPRNNVLKYLDYAFTGVFTFEMVIKMVDLGLILHPGSYFR
DLWNILDFIVVSGALVAFAFSSFMGSQQGPTRGTKGKDISTIKSLRVLRVLRPLKTIKRL
PKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKALEKDCKGQ
FLDYDKDTVAAMPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPS
PGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAIN
AKPLTRYMPEDTQSFQYRMWKFVVSAPFEYSIMIMIALNTVVLMMKFHGAPDVYEAMLKY
LNIVFTILFSLECVLKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLS
FLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIE
LNEDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDERSGTSGKECGSDF
AYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGR
ISYMDMYNLLRVISPPLGLGKNCPNRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALE
IKLASGMVMQRLMDAELKKDISTVWPSLSQKTMDLLVTPHKSNELTVGKVYAALMIFDYY
KQNRARRLQLQQMTISGTQCKVEALFKPLLPLTHMQDSASVLQSQQNLESLHQVASSNSI
NNGGMLPGYDPRYKPIASSGMERPIKGVQAKPKRIISKGPSVDTPENVNQVSVELIQIKN
SVSSTVSVPGSGLENQGRAASMPRLNVELQQRHSPGMYLDSVPDASPMRRSASTVAPQRP
QEVNLRDYTLEKPRQERTHHHHRHCHRRRDRDKEKRQRSLDSPLGAQPPSSNGVPEEPAS
EPAASQERTQKRGRSHERKHHHSSTDKQRYYSCDRYCSREHCCPKSATATGSCREEQETS
KKQGSGSVKGSPDASRSSSSTPSRGRRQLPQVPHTPRPGVAYKTAYSSQVHFVSSQASQS
PGRLSRGLSEHNTLRHSDSHYFPCPVPRISSEPFLGHGHSEALGSPYSSLQNQLDVFQDV
ASLSPTPSAEQSPRTSLPRMMGALHPTLGVDPRVPNGYHLSLGGSTSEGTGSRALRYRR
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttttgaagacgaggcgtccagccgcttcagaggcagcgggcccccgggaccg
gccagaggggccaaccggcagccggggcctccaggggggcagaggatgtacaaacagacc
atggcccagagagccaggaccatggctatttacaaccccattccagtcaaacagaactgc
ctcaccgttaaccgctccctgtttatcttcagcgaggataatattatccggaaatatgcc
aaaaagatcaccgaatggcctccgtttgagtacatgatcctggctaccatcatagcaaac
tgcattgtgctggccttggagcaacacctgccagcttcggacaaaaccccattatcagaa
cgtttggacgacacagagccctactttattggaatattttgctttgagacaggcatcaaa
atcatcgccctgggctttgcatttcataaaggctcctacctacgtaatggctggaatgta
atggactttgtggtggtcctaacagggatcctggccactgtaggggctgattttgatctg
aggacactgagagcagtaagagtcttgcggcccctcaaacttgtctctggcattccaagt
cttcaagtggtgttgaagtccataatgaaagcgatggtaccactgctacagattggaatg
ctgcttttcttcgccatccttatgtttgccatcatcggcctggacttctacattggcaaa
tttcatcgaacatgctttaggattgacacaaaggagcaggtggcagatttcccttgtggg
cttgaacctccagcaaggacctgcggcaacgggactgtctgtgaagagtactggcttgga
cctaactttgggatcacaaactttgacaacatcctttttgccattctcactgttttccag
tgtatcaccatggaaggatgggtggacatcctctacaatgccaatgatgcctcagggtac
atgtggaactggctgtacttcatcccgctcatcatcattggatccttcttcatgctcaac
ctggtgttgggtgtactctcgggagagtttgcaaaggaaagggagcgtgtggagaagagg
caagagttcctgaagcttcgccgacagcagcagattgagagagagttaactggttatttg
gagtggatctgtaaagcagaggaggtgatgctggctgaggaggacaagaacgcagaagag
aaatctctggatggagcatggtacaaacggaaacacaatcccaactctgttctgaaaagg
acaaagaagagtaagaatgacctcatcaatgcagaggaaggagaggaccatttcactgac
atttcatctgttgggtcgccgtttgcgcgaactagtgtaaagagcaagaatgatagctcg
tcttacctgaggaggaaagagaagaggattcgcttcgccatccgccacctggtcaaatcc
cagacgttttactggactgtattatgtcttgttggcctcaacacgctgtgtgtagccata
gtacactacgaccagcctgagtggctaacttatgcattatacctggctgagtttgtgttt
ctgggcttgttcctggctgagatgaccatgaaaatgtatggcctcggaccccagaactat
ttccactcgtcttttaactgttttgattttggggtcattattgggagtatttttgaggtg
gtctgggctgcaatcaaacctggtgcctcatttgggatcagcgttctgagagcactaaga
ctactccggatcttcaaagtcaccaagtactggaactctttgaggaacctggtggtgtcc
ctgctcaactctatgaagtctatcatcagtctattgtttctgctcttccttttcattgtg
gtcttcgctctgctgggcatgcagctgtttggtggacagtttaactttgaagatgaaact
ccaacaaccaactttgacactttcccagcagctattctcacagtgtttcagattctaact
ggggaggactggaatgctgtgatgtaccatgggatagaatctcagggtggtgtgcatgga
ggaatgttctcctctatttatttcatcatcctcactctctttggaaactacacactcctc
aacgtgttcttggccatcgctgttgataaccttgcaaatgcccaggaactcacgaaggat
gaagaggagcaggaggaggccattagcaaaaagcttgctcttcagaaggctaaagaggta
caggaagtcagccccatgttggctgctaacatttccatcacaacgagttatgtctgcacc
ccagtccatcactacctgagcaaggagctgcagaggccggtgaaaacaatgtctgtctgg
gagcagaaagccagccagctaaggaggcacaatcaggcgagctgtgaagctttgtatgat
cccgaggagtgtgtccacctcccctcaggcctccacatccggccagacacgaagacccac
cttgaccggcctctggttgtcgggcattccgatgggccgttagtgggcggccaccagcat
caccatcacaatccgtccacaccagaagaagcagagactgttactgatccatcttccgct
ccacctcattctcattacccacaccgtcaccatcgccacagagacagaggtcgggcaaaa
gtgaaagaagagccaaatgacaacggtgacaatggcaaaaatgggaggcaacacgtccat
cacagccactccaaaaaccatgagtacagcaggagacaagaggggaagaccgacaggtca
tgcagcaaagatggggggggggagtatcaccatcatagttcaatggatgacagtgcaggt
gggggagccacaagagagaaagagcatcggcatcatcattcacatcgacgatccagaggg
gggaatgggacagtgaacagtggagagagaggggagcgcagactccaccacaaatatgga
cgaccatctaataagaatggggatagggagagcaagaagaggagacattacactcatggg
tcaaggagccagtccagggctgaaggagaggagtccaacgagagagaggagacccatact
aacaggtttggcgactcagagagagaatccttggtcatttcccagcagctgggctctctg
ggagcacctggtcagccagaagactcggacaaccagaagaatgtcagaagaacaggccag
acctccatccacattccccctgtgactatcacctcacctggagagaccactctcatacaa
atgaacattactgataacgaatcaatacccattaatgagaagaacttcaggaaggatcaa
tgtcactctggacccagacccatcctaccttacagttcaatgttcatctttggacagacc
aacccggtgaggcggttatgtcactacatcgtgaccctgcggtattttgagatgtccatc
ctggttgttatcgcaatgagcagcattgctctggcagctgaggacccagtctggacaaat
gcccctcgcaacaatgtgctcaaatacctggactatgcctttactggggttttcacgttt
gaaatggtgatcaaaatggtggatcttggactgattctccatcctggatcctacttcaga
gacctgtggaacattctggacttcatagtggtcagtggggcactggtggcatttgcattt
tcgagcttcatgggatcgcagcaaggtccgaccagggggactaaaggcaaagacatcagc
accatcaagtcactgagggtcctcagagttcttaggcctctcaagaccatcaaacgtctg
ccaaaactcaaggccgtgtttgactgtgtggtcaactctctgaagaatgtgctgaacatc
ctcattgtttacatcctcttcatgttcatttttgctgttattgcggttcagctcttcaag
ggaaaattcttctattgcactgatgagtccaaagccttggagaaagactgcaaaggacaa
tttctcgactatgacaaagacacagtggcagcaatgcccagagagtggaaaaaatatgaa
ttccattatgacaatgttctgtgggccttccttactctctttacagtctcaaccggggag
ggctggccaactgttctgaagcactccgttgatgccacctttgaagaccaaggtcccagc
cctggctaccgaatagaaatgtccattttctatgtggtctactttgtggtctttccattt
ttctttgtcaacatctttgttgctctaattatcatcacatttcaagagcagggagacaag
gctttgtctgaatgcagcttggaaaagaatgagagggcttgtattgactttgccataaac
gccaaacctttgacacgctacatgccagaggacacacagtccttccagtacagaatgtgg
aagtttgttgtctcagctccatttgagtactccattatgatcatgattgctctcaacact
gtggtactcatgatgaagtttcatggagctccagatgtttatgaagcgatgctgaagtac
ctcaacatagtgttcaccattcttttctctctggagtgcgtcctcaagatcattgccttt
ggtcccctgaactacctaaaagatgcctggaacgtatttgactttgtgacagttttgggg
agcatcactgacatcttggtgactgaaatcaatactacggacaggctgctgaatctgagc
ttcctgaggctctttagagccgctcggcttattaagctgctgaggcagggctacaccatc
cgcatcctgctgtggacctttgtccagtctttcaaggccctgccatatgtgtgcctgctt
attgccatgctgttcttcatttatgccatcattgggatgcaggtgtttgggaacattgaa
ctgaatgaagacacagctatcaaccaccataacaactttcgcactttcctccaagctctc
atgctactgttcaggagtgcaactggagaggcctggcatgagatcatgttgtcatgtctg
agtcatcgagcttgtgatgagcgctcagggaccagtgggaaagagtgtggcagtgatttt
gcctacttctactttgtctcctttatcttcctctgctctttcctgatgctgaacctcttt
gtggctgtcataatggataactttgagtacctcaccagagactcctctatcctggggcct
catcatcttgatgaattcattcgagtttgggccgagtatgacccagctgcttgcggacgg
atttcctatatggatatgtacaatttgttacgcgttatctcacccccccttggcttaggg
aagaactgccctaatagggtagcatacaagcgacttgtcaaaatgaacatgcccatcgct
gatgacaacacagtccactttacctccacactgatggctctgattcgtactgcactggag
atcaagctggcctcagggatggtgatgcagcgattaatggatgctgagttaaagaaagac
atatcgactgtttggcccagcctctctcagaagaccatggatctgttggtgacgccacac
aaatccaatgagctgacggtaggaaaggtttatgcagcgctgatgatcttcgactattat
aagcagaatcgagccaggaggttgcagttgcaacagatgaccatctctggcacccagtgc
aaggttgaggctctgtttaagccattgctgcctctgactcacatgcaggactcagccagt
gttcttcaatcccagcaaaacctagagtcactccatcaagtggccagctcaaactccatc
aacaacggaggcatgcttccaggttatgatcccagatataagcccatagcttcctccggg
atggagaggcccatcaagggggtccaagctaaaccaaagagaatcatatccaagggccca
tcagtggacacaccggagaatgtcaatcaggtgtcagtagagctgatacagataaagaac
agcgtcagtagcacagtttctgtccctggctcaggtctggagaaccagggaagagctgct
tcaatgcctcgactcaacgtggaactccagcagagacactctccagggatgtatctagat
tctgtccctgatgctagccctatgaggcgctcggcttctactgtagctccacagcggccc
caggaagttaacctgagggactacaccctggaaaaaccccgtcaggagagaacacaccac
caccaccgtcactgccaccgccgcagagaccgggacaaagagaaaagacagaggtctctg
gatagcccccttggtgctcaacctccaagctcaaatggtgtacccgaggagccggcatct
gaacctgctgcttcccaagagcgaacccagaaacgtgggcgctcccatgagaggaaacac
catcactcctccacagacaagcaacgctactattcatgtgaccgctactgcagccgggaa
cactgctgtcccaaatctgcaactgccaccggctcctgccgggaggagcaggaaaccagc
aaaaagcagggcagtggttcggttaaaggcagcccagatgcatcaaggtcaagttctagc
acaccaagccgtggacgccggcagcttccacaggtcccacacactccacgacctggggtg
gcatacaagactgcatactcctcacaagtgcactttgtatctagccaggcctctcagagc
cctggtcgactaagccgtggcctgtcggaacacaacactctccgtcatagcgattcccac
tacttcccctgccctgtccctcgtatcagctcagagccctttctgggccatggccacagt
gaggccctgggcagcccttacagcagcctccagaaccagctggatgtcttccaggatgtg
gcatcactgtcccctacccctagtgctgaacagtcaccccggacctcactgcctcgaatg
atgggagccctacatccaactcttggtgtagaccctcgtgtgcctaatgggtaccaccta
agtttagggggcagcaccagcgaaggcactggcagcagggcactgaggtacagaaggtag
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integrated database retrieval system
