Girardinichthys multiradiatus (darkedged splitfin): 124877470
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Entry
124877470 CDS
T08099
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124877470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124877470
Membrane trafficking [BR:
gmu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124877470
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
124877470
RAVE complex
124877470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
124877470
NCBI-ProteinID:
XP_047236646
LinkDB
All DBs
Position
12:23064016..23143672
Genome browser
AA seq
3089 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVSYVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVSCSQRGGQIAASYGSIVCVFEPVQLPDQKYTSSSKLSCQWQKTGQFVLESMVQNLAW
HPTGGTLLTSSSSLQLWSNADGKDESEDRGKQTKTTKRDSSSTWRCIWQSKTASSVSFMK
FSPDGQFFATAGQDDCLVKVWYSTNKWKSCVAQLFTPPDASVSVQGDLTFSFIYLAHPRS
VTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLISGYHSSYLSGPNGET
VHSADHSLKHTCNGKTSGMSSQEFSFQESWHSSSYRDIPQPSLTGCQPHHPNQHRNHRRS
SNSGTPHANALCHFHIAASINPATDIPLLPSISALSAADDEVPGGLFIVHWLNNKELHFT
LAMEVFLQQLGGRFDQRNESPNEDIDDEDNSDEEENRPSDSRGPEGGELPVAAVEHQVDV
LLEEWNKGADMLFSIHPLDGSLLVWHVDWLDEYQPGMFRQTQVSFVSRIPVAFPTGDAIS
LSHSVVMYACNKNVDLAIEHGRQRPPGSSLSQTKSALISYGGHGKAVPSSSLRLSIFTPN
VLMISKHDDGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTS
HHNAVRTPEADRILAPPEAYSTSEPFLSHGSRPVRVSLGGVSQDPNAIYSELILWRVDPV
GPLSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGQSLRLY
QAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDAITHFQGKETQLLHVF
EEDLILGSLKTEDTQDTPNSPSIAVFSGRFFLVVVELTPTGRSLLHMWHLHLAACPVTIE
ESSTQKEVNPFSPISGSQFIFDTPISPVQKSKPCTSNLQSACRLSLTTHMLCSQEMALPQ
GVEVISITPSAGHLSASCSLPSGRVPYLLATSCSDEKVRFWMCNVSKREPSSVDSLVYQW
EEWPLLVKETLPNSSIVSVPGQPIKVSCCHSGRIAVAYRQTTNPPLNSTPHLSTHRLLPS
PPALASSPFSSKTHLTQTLHPCQSLPLSPNPANSKEPAVHISTFQCESTGGSQWILEQTI
VLEGTDPATFCAASDGPPGHANIPNNTDFSAPNGNCPGSANRSLVHLDWVSQEDGSHILT
VGIGTKIYLYGRLSGKPPDLGLSSETNRDQSLSRLVLLRSVNLLSSVEGSLPIPVSLSWV
RDGILVVGMDCEMHVYSQWQPPVAPKPSVTVVQDTDISSSVSSILSAVRQCQEDVFTTGA
SNISLTLPKRSLTRSMMSLAQKLRGKKTLYDLPVEMEDCGLFEAAHQLFPTLPQYHPVQL
LELMDLGKVHRAKAILSHLVKCIAGEIVILKDNAAHPEKRVRSRTISVGGSTARDEKIFN
KSESSSPDYTEISSVPPLPLYALLAADEDTAHREKGGSLSGDSGHGSSQTDAYDELFHAH
NTPDLDPLNNEQEETGNKVIDLSHYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMA
LADTIATTSTDLKDNQDKSKGGETLDECGLKFLLAVRLHTFLLTSLPPVHRVQLLRQGLS
TCQYAWAFHSEAEEELLNMLPALQKGEPTWAELRAMGVGWWLRSTNKLRRCIEKVAKASF
QRDNDPLDAAIFYLAMKKKAVVWGLYRSQKNTKMTEFFHNNFSEDRWRKAALKNAFSLLG
KQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSSTYKKILQRHVL
GQDKQIPVHPDPFLRSIAHWVLEDYSRALDTLIEQPAICKGSGPSKSKCDNGSSAMSACN
PEVFNFYIYLRTHPLLLRRHFSSSDKAKVALTTEVRGADSISLDERRLFFTTAYAHLHAG
CPMLALDVLSKMPKVHKHSKVSHQGAKGIPHELSVGSRNGQASEPDWSPPSLNGYQSDGN
SNSRSDSVLSFDWSQPSMTLPDEPLELRWDSDKDEEDEDEENNQERAKKADNSVFQDRQD
SMLTIAETMKSEESEDSDDFIAPSEDIFLAHLKFTACLKIMSNELRTLSTGYELDGGKLR
YQLCQWLEREVVAHQRVCSYKPCLPEQSVPGDGPVSGLVEEEQPGSPCGDSQMSRRLWLQ
SNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSMKSVVPVNSQPTSIPLLM
ACTANVKTVVANPIVYLTNLTHDILQTINALDSPPHPDVVNNEIYVMHTLAASLSACIYQ
CLCDGHKYSHVNHFTGTVYQSVLLSQKQALKTIMDEAVHPNTSPGQWPGIASLIRVLSSA
GEETQPGLAVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNCNLWLTVFGGGARIP
LMDLASSPARTPPPTSPSGSDRKPLRFRLLSSRSGSREESGIEREGPSCPRIVVEQEATS
VFKEQFVPPEISIWDYFIAKPELPPSENRVDYDSEESQDSQEEDDEDNESEDVFETNSLL
REHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMVGYDLLDLPVASPLCHAVLKTLQRWEQV
LQKRLEIFGGPPSKYISIHHHDETPGPALLRHTALFEPSNTPFRNNHHSALPVKRLWQYL
VKQEEVQETFIRNIFTKKPGTNQSVEDHTDSMKYSGVEEAGNSQTESDLGYPGGKARIIH
KESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDEVESKSVGGDDFL
VVHARDDFASLHGTTPYTHSSPGTPINVPWLGGHQTGRGAAVMIKRNINNVRRMTSHPTL
PYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGGLSLWQT
NTSGNTPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPANSLVHA
FCCHESGATVLSMVQRRQLLLTGGRKGWVTILELPHRHQRQSFLAHDSPVKALAVDPTED
CFISGSAEGNIKVWSLATHCLLYTFPNEHARQSLFRNLGTGVMQIEVGPASHIFSCGADG
TMKMRTLPNRFAVAENNSSSPRSDVKFFI
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaagtccttacaggggctgtcaaccccggggacaattgcttctctgtt
gggagtgtcagctatgtgcctttcactgcctatgcgtcaggttgtgacgtggtgatttta
gggagtaattttgagcggctgcagatcatcccgggggccaaacacggtaatatccaggtc
ggctgcgtcagctgctcacagcgaggtggacagattgcagcttcctatggaagcattgtt
tgtgtgtttgagccagttcagctcccggatcaaaagtatacttcgtcctctaaactaagc
tgccagtggcagaagacgggtcagtttgttttagagtcaatggtacaaaacttggcttgg
caccccacaggtggtactctgctaactagctctagtagccttcagttgtggtccaatgct
gatggaaaagatgaaagcgaagacagaggaaagcaaacgaaaaccaccaaacgagactct
agttctacctggagatgtatctggcagagcaagactgcctcttcagtcagttttatgaag
ttctcacctgatggacagttctttgctactgctggacaggatgactgtctggtgaaggtc
tggtacagcacaaacaagtggaagtcatgtgtcgcgcagctatttactcctccagacgcc
agtgtgagtgttcagggagatctgaccttttccttcatctacttggcccatcctcgctcc
gttactgggttttcctggaggaagactagcaagtatatgccacgaggggcggtctgtaat
gttctgctcacctgctgtaaggacagcgtttgccggctgtgggcagaaaccctgttgcca
ggtgacagcctcatctctggttaccatagcagctatctttctggaccgaatggcgaaacg
gtccactctgctgaccactctttgaaacacacctgcaatgggaaaacatcaggaatgtca
tcacaggaattcagtttccaagaatcatggcattcctcgtcttatcgggatattcctcag
ccttctttgactggctgccagcctcaccatccgaaccaacaccgtaaccacaggaggagc
agcaacagtgggacgcctcatgctaacgctctgtgccacttccacattgcagccagcatt
aaccctgccacagacattcctttactgccttccatctctgctctgagtgcggcggatgat
gaggtacccggcggtctgtttattgtccactggctcaacaacaaagagcttcatttcact
ttagccatggaagtcttcctgcagcagctcggaggacgttttgatcaaaggaacgaatcc
cctaatgaagacattgatgatgaagataactcggatgaagaagagaacaggcctagtgac
tcccgaggtcctgaaggtggggagcttcctgtagcagccgtggagcatcaggtggatgtt
ttgttagaagagtggaataaaggggcggacatgctgttcagtatacatcccctggatggc
tctttgttagtctggcatgttgactggttagatgaataccaaccaggcatgttcaggcaa
actcaggtgtcgtttgtgtcccgtatccctgtagccttccctacaggtgatgcaatctcc
ctgagccacagtgtggttatgtacgcctgcaacaaaaatgtggatctggctattgaacac
ggcagacagcggccgcctgggagctcattgtctcaaaccaaatctgctttaataagctac
ggaggtcacggaaaagcagtacccagcagcagcctcagactgagcattttcaccccgaac
gtcctcatgatctccaaacacgacgacggatctctgaatcagtgggcagtcagttttgca
gaggactctgctttctccactgtgcttagtgtgtctcacaaatcacgctactgtggtcac
cgtttccacctcaatgacttggcctgtcactccctgcttcctcttctcctcaccacctca
caccacaacgccgtgaggacgccagaggcagaccgcatcctggctcctccagaggcctac
tccacaagtgagccgtttctctctcatgggtcacgacctgtccgtgtgtccctcggaggg
gtttcccaagatcccaatgccatctacagcgagctgattctgtggagggtggaccctgtc
gggcctctgtctttgtcgggcggggtctcagagctggctaggataaattcccttcatgca
tcagcgtttgctaatgtagcctggcttcccacactcattcccagcagctgtttaggtgtg
tactgtaactcccccagcgcttgctttgtggcgagtgacggccagtcactcaggctctat
caggctgttattgaggcgaagaaactcctgagtgagctctccaaccctgagatttctaaa
tatgttggggaggtgtttaacatcatcagtcagcagtccacagcaaaaccaggctgtatc
attgagctggatgccattacacactttcagggtaaggagacccagctcctgcacgtcttt
gaagaggatctgatccttggcagtctgaaaacagaagacacacaagatactcctaattct
ccttctattgcagtcttctcaggacgttttttcctggtggtggtagaattaacccctaca
ggtcgctctttgctccatatgtggcatctgcatttggcagcttgtcctgtcactatagag
gaatcttcaacacagaaagaagtcaacccattttctcctatatccgggtctcagttcatc
ttcgacacacccatctctccggtacagaagagtaaaccctgcacctccaatttacaaagc
gcctgtcgcctcagcctgacaacgcacatgctgtgcagccaagagatggctctgccgcaa
ggggtggaagttatcagcatcactccttcagcaggtcatctgagtgcatcgtgttcttta
ccatctggccgtgtgccttatcttcttgctacttcctgttctgatgaaaaggtgcgtttc
tggatgtgtaatgtatcgaaaagagaaccctctagtgtcgacagtttggtatatcagtgg
gaagagtggcctctactggtgaaggagactcttccgaatagcagcattgtgagcgtgcct
ggtcagcccatcaaggttagctgctgtcactctggaaggattgctgtcgcttacaggcag
acgacgaaccctccactgaactcaacacctcatttgagcacacaccgactgctaccctct
cctcctgccttggcatcctctcccttcagcagcaagacacacctgacccagactctacac
ccttgtcaaagtctgcctctaagtcccaacccagccaattcaaaagaaccagcagttcat
atcagcaccttccaatgtgagtctactggtgggtcacagtggatactggagcagactata
gtcctggaaggcacagatcccgcaacgttttgtgctgccagcgatggtccacccggacat
gccaatattcccaataacacagacttctctgcacctaatggtaactgtcctggttctgct
aataggagcctggttcacttggactgggtttctcaagaggatgggtcacacatattgact
gttggtattgggacaaagatttatttgtatggccgtctctctgggaagcccccagattta
ggcctgtcttctgaaactaatagagaccaaagtctgtctcgtctggtactccttcgctcc
gtcaacctgctttcctctgttgaaggctcgttacccatcccagtctccctgtcctgggtt
cgagatggaatcttggtagtgggcatggactgtgagatgcacgtttactcccagtggcaa
cccccagttgcccccaaacccagtgttacagtcgtccaagacactgatatcagcagcagc
gtctcctctatactctcagctgtcagacagtgccaagaggacgttttcaccaccggtgct
tccaatatttcactgaccctacccaaaagatccctaacaagatcaatgatgagcctggca
cagaaacttagagggaagaaaaccctttatgaccttcccgtggagatggaagactgtgga
ctttttgaagccgcccaccagctctttcctactctgccccaataccatccggtacaactg
ctggagctcatggacctggggaaggttcaccgtgccaaagcaatcctctcacacttagta
aaatgcattgctggggaaattgtgatacttaaggacaatgccgcccatccagagaaacgt
gtgcgctcccggactatcagtgtgggaggcagcacagccagggacgagaagatattcaac
aaatcagaaagttccagtcccgactacactgagatcagctccgtccctcccctgcctttg
tacgctctgctggcggccgatgaggatacagcacatcgtgagaaaggaggcagtttgagt
ggtgatagtggacatggctccagtcagacggatgcctatgatgagctctttcacgcccac
aacactccggatctggatcctctcaacaacgaacaagaagaaactgggaataaggtcata
gacctttcccactacagtccgacatactttggcccagaacatgctcaggttctgtccagc
catctcctccattccagcctacctgggttaactcgaatggagcagatgtctctcatggcg
ctggctgacaccattgccacaacgagcacagacctcaaggacaaccaggataagagcaaa
ggtggagaaaccttagatgagtgcgggttgaagtttttgctggctgtcagacttcatacc
ttcctccttacatcgctgcctcctgtccatcgagtccagctgctacggcaaggtctttcc
acgtgtcagtatgcctgggccttccactcggaagctgaggaggagctgctgaacatgctg
cccgccttgcagaagggagagcccacctgggctgagctgcgtgctatgggtgtaggctgg
tggctgcgcagtaccaacaaactgcgcaggtgtattgagaaggttgctaaggcttctttt
cagagagacaatgatcctctggatgcagctatattttatcttgcaatgaaaaagaaggca
gtggtttggggactgtacaggtcccagaagaatacaaaaatgacagagtttttccataac
aacttcagcgaggacaggtggaggaaggctgcattaaagaatgccttctctctgctggga
aaacagcgattccagcattctgcagccttttttcttctggctggttcccttaaagatgct
gtggaggtgtgtttagagaaaatgcaggacttgcagctggccctcgtgatctctaggctg
tatgaatctgagtttgagacatcttctacttataaaaagatcctccagagacatgttttg
ggacaagacaaacagattccagtccatccagatccgttcctgcgaagcatagctcactgg
gtcctggaagattacagtagagcactggacacgctaattgagcaacctgcaatctgcaaa
ggctctggaccctcaaagagcaaatgtgacaatggttcctctgccatgtctgcatgtaac
cctgaggttttcaacttttacatctacctccgcacgcacccgctgctccttcgccggcat
tttagctcttcagacaaagctaaagtggctctgactacagaagttcgcggagctgactca
atcagcctggatgaaaggagactcttttttaccactgcatacgcacatctgcacgccggg
tgcccgatgttagcacttgatgtcctttccaaaatgcccaaagtccacaagcactccaaa
gtttcccatcagggggctaaaggcattccacatgagctgagtgttgggagcaggaatgga
caagcatcagaacccgactggtctccgcctagcctgaacggctaccagtcggatggaaac
agcaacagccgatccgattcagtgttaagttttgattggagccagccgtcgatgaccctt
ccagatgaaccgctggagctgaggtgggacagtgacaaagacgaggaggatgaggatgaa
gagaacaatcaggaaagagctaagaaagcagacaacagcgtgtttcaggaccgtcaggac
tccatgttgacaatagcggaaacaatgaaaagtgaggaaagtgaagacagcgacgacttc
attgctccatctgaagacatatttttggcccatcttaagttcacagcttgcttgaagatt
atgagcaacgagcttcggactctgtcgacggggtacgaactggatggagggaaactgcgt
taccagctctgtcagtggttagaaagagaggtggtggctcaccagcgtgtttgcagctat
aagccttgcttgccagagcagtctgtcccaggtgatggccctgtttctggactggtggag
gaggaacagcctggcagcccctgtggtgacagccagatgagcaggagactctggctccag
agcaaccagcctttactgaggatgtttctgagctactgcagcttgcacggctcccatggt
ggaggactggcttctgtacgcatggagctcattttactgctccaagagtcacatcaggat
gactccatgaagtcagtggtaccagtgaactcccagcctacctctatccctctgctcatg
gcttgcacagccaatgtgaagaccgtggtcgccaaccccatcgtctatctgaccaatctg
acgcacgacatcctgcaaaccatcaatgcactcgactctcctccacatccggatgtcgtt
aacaacgagatctatgtgatgcacaccttggctgcttccttatctgcgtgtatttatcag
tgtctgtgtgacggacacaaatacagccatgtgaaccatttcaccgggaccgtgtatcag
agtgttttattgtctcagaagcaagcactgaaaaccatcatggatgaggctgttcatcca
aacacttctcctggtcagtggcctggtattgcctcccttattcgcgtgttgagctctgca
ggtgaggagacccagccaggcttggctgtgctgctctgtgagatcctgactgcagtcttc
ctcagtctgtttgttcacggcatggccacgcactccagcaacgagctttttcgcattgtg
gcacacccactgaactgcaacctttggttgacggtgtttggaggaggcgcccgcatccct
ctcatggatctagccagcagtccagcaagaacgccgcctccaacctccccaagtgggtca
gacaggaagccactgcgattcaggctcctgtcatcccgcagtggatccagggaagagtct
ggaattgaacgggaaggaccatcctgtcctaggattgttgtggaacaggaagctacctct
gtttttaaagagcagtttgtccctccagagatcagtatttgggattattttattgccaag
cctgagctgccaccatcagaaaacagagttgattatgactcagaagagagccaggacagc
caggaagaagatgatgaagacaatgaatctgaagatgtgtttgagaccaactctctgctg
agagagcattcaaaccataattcatacagctggtgtttgatgcgcctagccatggtgcag
ctggtgttggtcaacctcaagtccttttacccaatggtgggatacgatctgttagatttg
cctgtggcctctcctctgtgtcacgctgtgctgaaaacgctgcagcgctgggagcaggtg
ctgcagaaaaggctggagatcttcgggggccctccctctaagtatatctccattcaccac
catgatgaaacacctggccccgccctgctcagacacacagccctgtttgaaccatccaac
accccgttcagaaataaccaccactcagcactgcctgtgaagcgtttatggcagtatttg
gtcaaacaggaagaggtgcaggagactttcattaggaacatctttacaaagaaaccaggc
actaatcagtcggttgaggaccacactgacagtatgaaatattcaggagtggaagaggca
ggaaacagtcagactgagtcagatctgggctaccccggaggcaaagcacgcatcatccac
aaggaatctgacatcattacagcctttgccatcaacaaggcaaaccgtaattgtttagtc
atggcgtccacccatgacattcaggagctggacgtgtcgtccatcttggccacacagatc
ctgacgtggatcgatgatgatgaagtcgaatccaaaagtgttggtggtgatgacttcctg
gtggtccatgctcgtgatgactttgcttcgcttcacggcaccaccccatacactcacagt
agccccggcacacccatcaacgtgccgtggctcggaggccaccagacaggcaggggtgca
gctgtgatgataaagagaaatatcaacaatgtgagaagaatgacctcccatcctacactg
ccatactacctgacaggagctcaagacggtagcgtgaggatgtttgagtggggtcactcc
cagcagatcatctgcttcagaagtccaggtaactccagagtcaccaggatccgcttcaac
caccaaggaaacaagttcggtattgtagatgcagatggaggattaagtctctggcaaacc
aacaccagtggtaacacacccaaaccatacctgactttgcagtgccacaacaagacagct
catgactttgtttttgtgggctcttcttccctcatcgccactgcaggcctttcaacagac
aacaggaatgtctgtctctgggacacgctcgtcactcctgcaaacagcctcgtacatgct
ttctgctgccacgagtccggtgccaccgtgctctcgatggtgcagcggcggcagcttctc
ctcaccggcgggaggaaagggtgggtcaccatcttggagcttccacacagacaccagcgg
cagagcttcctggctcacgactcaccggttaaagcgttggccgttgatcccactgaggac
tgcttcatcagcgggtctgccgagggaaacattaaggtgtggagtctggccacgcactgc
ctcctctacacctttccgaacgaacacgcccgccagtcgctgttcaggaacctcggtacc
ggagtgatgcagatcgaggtggggccggccagccacatcttctcctgcggtgctgacgga
accatgaagatgaggacacttcccaaccgctttgccgtggcggaaaacaacagcagcagc
cccaggagcgatgtcaagttcttcatctag
DBGET
integrated database retrieval system
