Girardinichthys multiradiatus (darkedged splitfin): 124877618
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Entry
124877618 CDS
T08099
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124877618 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124877618 (smarca2)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124877618 (smarca2)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124877618 (smarca2)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124877618 (smarca2)
Chromatin remodeling factors
BAF complex
124877618 (smarca2)
PBAF complex
124877618 (smarca2)
GBAF(ncBAF) complex
124877618 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
124877618
NCBI-ProteinID:
XP_047236920
LinkDB
All DBs
Position
12:46421408..46491177
Genome browser
AA seq
1598 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGTGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGL
QAQGQSDYSQDSMYPMHKPMEAAMNDKTMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQH
SQGYMSPHPSPMGIHEHASSPMSGGGGGPTPPHMPPSQSGPMMSMDPQGGMPNMSGMGQQ
GRGPSTFSPVQLQQLRAQILAYKILARGQPLPENLQLAVQGKRSLPTMQQQQQAPPPQQQ
QQQLQQQQPPQLQQASGASPYRPSGMAMAPMSGPQSSPCPTPAMQGPNQSTKPWTDVQGV
DNQANAQKHLTLVPSGRPSPAPPQAPAGPSGPVPGGSAATHPPGQQVSPMPQMQQKQNRI
TPIQKPQGLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNF
QRQLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKQEQEKKRRQKH
QEYLNSILQHAKDFKEYHRSVTGKIQKLTRSVANWHTNTEREQKKETERIEKERMRRLMA
EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKKKKKKVEE
DGECTSDIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEV
APRSDSEESGSEFEEEDEEEMGKAETEEKKKIDPNEVEETKHDAKNVIESAKQDVDDEYS
CPTGQTSSQSYYGVAHAVIERVEKQSSLLINGMLKHYQIQGLEWMVSLYNNNLNGILADE
MGLGKTIQTIALITYLMELKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPAL
RRGLVPQLRSGKFNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDG
SEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIINGHELYRASGK
FELLDRILPKLHATSHRVLLFCQMTSLMTIMEDYFSYRNFQYLRLDGTTKSEDRAALLKK
FNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRV
LRLCSVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEED
EVPDDETLNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEV
ERLTYEEEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKRRKRKRR
QDKDSSSRDDGGMKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYREGSGRQLSEVF
VQLPSRKELPEYYELIRKPVDFKKIKERVRNHKYRSLGDLEKDVMLLCQNAQTFNLEGSQ
IYEDSIVLQSVFKSARQKIAKDEDSEDDSDEEDDDDYDSEAEAKSVRVRIKLGREGRSHD
KGKKRQSRAKAKPVVSDDDSDEDQDDNDQSDKSKSDDD
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccgtcagacacgtcaggtggcatgtcccatcctggcccatccccagggaca
ggcctgtccccagggcccatcttggggcctagccctggaccagacccctcaccaggttct
gttcacagcatgatggggcccagtcctggaccaggaacacccaacgccccacatggcctg
caggcccaggggcaaagtgattactctcaggacagcatgtatcctatgcataagcccatg
gaggcggcaatgaatgacaagacgatggctgaggcgatgcatttcggtcacatgaaaggt
gtgggcatgagatcccttcatagcggcatgggacctcctcagagtcccatggaccaacac
agccaaggttacatgtctccacatccatccccaatgggaatccatgagcatgcttccagt
cccatgtcaggaggtggaggtggacctacaccaccccacatgcccccatcccagtcaggc
cctatgatgtccatggatcctcaaggaggcatgcccaacatgtccggtatgggccaacag
ggacgtggaccctctactttcagcccagtccagctccagcagctcagagctcagattctc
gcctataagattctggcccgcgggcagccgctgccggaaaacctccagctggctgttcag
ggcaaaaggagcctgcccacaatgcagcagcaacagcaggcgccgcctccacagcagcaa
caacaacagctgcagcagcagcagccaccgcagctacagcaggcatccggtgctagccca
tacaggccatcaggtatggcgatggcacctatgagcggtccccagtcaagcccctgccca
acaccagccatgcaaggacccaatcaaagcaccaagccctggactgatgttcaaggtgtt
gacaatcaggcaaatgcacaaaagcacctcactctggttcctagtggccgtccgtctcct
gcaccccctcaggctcctgcaggaccttctggacccgtgccgggaggttcagcagctact
caccctccaggccagcaggtgtcccccatgccccaaatgcagcagaagcagaaccgaatt
acgccaatccagaagcctcaaggtttggacccagtgggaatcctacaggagagagagtac
agactgcaggcccggatcgcacatcgaatccaggaactggagagtctacccggctctttg
cccccggaccttagaactaaagctacagtggagctcaaggcgctgcgtctgctcaacttc
cagcgtcagctgaggcaggatgtggtggcatgtatgaggcgagacacgaccctggagaca
gccctcaactcgaaggcctacaggcgcagcaagcgacagacgctgagggaggcccgcatg
acggagaagctggagaagcagcagaaacaggagcaggagaagaaacgtagacagaaacat
caggaatatctcaacagtattctccaacatgccaaggactttaaggaataccaccgctca
gttactgggaaaatccagaaactcaccagatccgtcgccaactggcacacaaacaccgag
cgggaacagaagaaggagacggagcgaattgagaaggagaggatgaggagactgatggca
gaggatgaggaaggctatcgaaaactcattgaccagaagaaggacaaacgtctggcctat
ttactgcaacagacggatgaatacgtggccaaccttacgactctggtgtatgaacacaaa
gctgctcaggcagccaaggagaagaagaggaggaagaagaaaaagaagaaggtggaggaa
gatggtgaatgcaccagcgacattggacctgatggagagcccatggatgagagcagccaa
atgagcgagctgccagtcaaagtgattcagacggagactgggaaggttttgcaggggacg
gatgcccccaagtccagccagctggaggcttggctcgagatgaaccctgggtatgaagtt
gccccacgttcagacagcgaggaaagcggctcagagttcgaggaggaggatgaagaggaa
atgggcaaagcggaaacagaggagaagaagaaaattgatcccaatgaagtcgaagagact
aagcatgatgccaagaacgtcattgagtcagccaaacaagatgtagacgatgagtacagc
tgtcctactgggcaaacaagctcccagtcttattacggtgtggcccacgctgtcattgag
agggtggagaagcagtcgtctctgctgataaacggcatgctcaagcattatcagatccaa
ggtcttgagtggatggtgtccctctacaacaacaacctcaacggcatcctggctgatgaa
atgggcctcggtaaaaccatccagaccatcgccctcatcacatacctgatggagctcaag
aggctcaacggcccctatctcatcatcgttcctctctcaactttgtctaactgggtttat
gaactcgacaaatgggctccttctgtggtcaaaattgcttacaagggcactcctgctctg
cgtcgtggtctcgtgcctcagctccgcagcggcaagtttaatgttcttctgaccacctac
gaatacatcatcaaagacaagcaaatactggctaagattcgctggaagtacatgatcgtg
gatgagggccatcgtatgaagaaccaccactgtaagctgacgcaggtgttgaacacccac
tacgtggctcctcgccgccttctcctcaccgggacaccgctgcagaacaagctgcccgag
ctgtgggctctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaatgcaccttttgctatgactggagagagggttgaccttaatgaggaggag
accatcctgatcatccggcgtttgcataaggtgctccgcccatttttgctccgtagactg
aagaaggaggtggaatctcagctgccagagaaagtggaatatgtcattaagtgtgacatg
tctgcgatccaaaaggttctctaccgccacatgcagaaaggcatcctgctaaccgacggc
tcggagaaagacaagaagggcaaaggaggcgctaagaccctaatgaacaccatcatgcag
ttgaagaagatctgcaaccatccatacatgtttcaacacatagaggagtcttttgctgag
catctgggctacccaaatggcatcatcaatgggcatgagctgtacagagcttctgggaag
tttgagcttcttgatcggatcctgcccaagctccatgccactagccacagggtcctgctg
ttctgccagatgacctctctgatgacaatcatggaggactacttcagttatcgcaacttc
cagtatttacgtcttgatggaaccacaaaatcagaggaccgggctgcactcctgaagaaa
tttaatgaggaaggatctcagtacttcatcttcctcctcagtaccagagctgggggcctt
ggccttaacctgcaggctgcggacacggttgtcatctttgacagtgactggaacccacac
caggaccttcaggcccaggatcgggctcaccgcatcgggcagcaaaacgaggtccgtgtg
cttcgtctctgttctgtcaacagcgtggaagaaaaaatcctggctgctgccaaatacaaa
ctgaatgtggatcagaaggtcatccaggcaggcatgtttgaccaaaaatcctccagccac
gagcgccgagccttccttcaggccattttagagcatgaggagcagaatgaggaggaagac
gaggtccctgatgatgaaacccttaaccagatgatagctcgcaatgaagatgaatttgag
cttttcatgcggatggacatggaccgtcgtcgagaggacgccaggaacccaaaacgtaag
cctcgtctgatggaagaagatgaactgccctcctggatcatcaaggatgatgctgaggtg
gagagactcacctatgaggaagaagaagagaagatgtttggccgaggatcacgttgtcgt
cgggatgtagactacagcgacaccctgactgaaaaacagtggctgcgagccatcgaagac
ggaaacttggaggagatggaggaggaaatccgcctgaaaaggcgcaaacgcaaacgacgt
caggacaaagactcgtcgagcagagatgatggaggcatgaaggccaagaagaggcgaggg
cggccaccagcagagaaactctcgcccaatccgcccaaacttaccaagcagatgaacacc
atcatcgacacagtaatcaactacagagaggggtcaggaaggcaactgagtgaggtgttt
gtgcagcttccatccaggaaggaacttccagagtattacgagctgattagaaaacctgtg
gacttcaagaagatcaaggagcgtgtgagaaaccacaaatacagaagtttgggagacctg
gagaaggacgtgatgcttctctgtcagaatgcacaaactttcaacctggagggatcccag
atatacgaagactccattgttctacagtctgttttcaagagtgccagacagaagattgcc
aaggacgaagacagtgaggatgacagcgatgaggaagatgatgacgactatgactcagag
gctgaggctaagtctgtccgggtgaggatcaagctgggcagggagggacgcagccatgac
aaaggcaagaagaggcaaagccgtgcgaaggccaagccggtggtcagtgatgacgacagt
gacgaggaccaggatgataatgatcagtcagacaagagcaaaagtgacgacgactga
DBGET
integrated database retrieval system
