Girardinichthys multiradiatus (darkedged splitfin): 124877671
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Entry
124877671 CDS
T08099
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04137
Mitophagy - animal
gmu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124877671
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124877671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124877671
03009 Ribosome biogenesis [BR:
gmu03009
]
124877671
04131 Membrane trafficking [BR:
gmu04131
]
124877671
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124877671
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124877671
Ribosome biogenesis [BR:
gmu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124877671
Membrane trafficking [BR:
gmu04131
]
SNARE
SNARE associated proteins
Others
124877671
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124877671
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124877671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
124877671
NCBI-ProteinID:
XP_047237021
LinkDB
All DBs
Position
12:33540383..33551593
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLQTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTAGG
SGPSHSSGGTGTGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggggaatccaaaaatgatgatctacagactgcaattctgaagcaaaag
agcagacccaacagactgattgttgatgagtcgattaacgaagacaacagcgtggtctct
ctttctcaggctaagatggacgagctgcagctcttccgtggtgatacagttctgatgaag
gggaagaagaggcgggagactgtgtgcatcgtgctctcagatgacacctgctccgatgaa
aaagtccggatgaacagggttgtccgcaacaatctgagggtccgtcttggtgacgtcatc
agcattcagccatgtcctgatgtgaagtatggaaagaggattcatgtcctccccatagat
gacacagtggagggaattactggcaacctgtttgaagtctacctgaagccatactttctg
gaggcttacagaccaattcgcaaaggtgatattttcttggtcagaggaggcatgagagct
gtggagttcaaggtagtggagactgatccttccccctactgcatagttgctcctgacaca
gtcattcactgtgagggcgagccaatcagaagagaggatgaggaggagtcgctgaatgag
gtgggctatgacgacattggaggagttaggaagcagttagctcagattaaagagatggtg
gagctgcctctcagacatcctgcactgtttaaggccataggagtcaagcctccccgtgga
attcttctttatggaccacctggaactggaaaaaccttgattgccagggctgtggcgaac
gaaacaggagctttcttcttcctcattaacgggcctgagatcatgagtaagctggctgga
gagagtgagagtaacctgagaaaggcctttgaggaagctgagaagaatgctcctgccatc
atcttcatcgatgaacttgacgctattgctccaaagagagagaagactcatggagaggtg
gagaggcgcattgtttcccagctgctgacccttatggacggcctgaaacagagggctcac
gtcatcgtcatggctgccaccaacagacccaacagcattgatccagctcttaggagattt
ggacgttttgacagagaagtagacattgggatccctgacgcaaccggccggttggagatt
ctgcagattcacaccaaaaacatgaaactagctgatgatgttgacttggaacaggttgcc
aatgagacccacggccacgttggtgcagatctggcggctctctgctccgaggccgctctg
caagccattaggaagaagatggacctgatcgaccttgaggacgagactattgatgctgaa
gtcatgaactctcttgccgttaccatggacgactttaagtgggccctgagccagagcaac
ccatcagctctgagggagacggttgttgaggttcccaacatcacctgggatgatattgga
ggtctggaagatgtcaagagagagctgcaggagctggtgcagtaccctgtggagcaccca
gacaagttcctgaagtttggcatgaccccatctaagggtgtgcttttctatggtcctcct
ggttgtggtaagactctgctggccaaagccattgccaatgagtgccaggcaaatttcatc
tccatcaaaggacctgagctgctcaccatgtggtttggagagtcggaggctaatgtcaga
gagatcttcgacaaggcccgtcaggctgccccgtgcgtactcttctttgatgagttggac
tccatagctaaggctcgtggcggcaacgttggagatggcggcggagctgccgaccgtgtc
atcaaccagatcctaaccgagatggacggaatgtcgagcaagaagaatgtgttcatcatc
ggggccacaaacagaccagacatcatcgaccctgccatcctgagacctggccgtctcgac
cagctcatctacatccccctgccagacgagaagagcagaatcagcatcctgaaggccaac
ctgcgcaagagtcccatcagcaaggacgtggacctagacttcttggctaagatgaccaac
ggcttctccggtgctgatctcacagagatctgtcagcgggcatgtaagctcgctatccga
gaaagcatcgagaacgagatccgcagagagagggagaggcaaacaaacccatcagccatg
gaggtcgaggaggatgatcctgtgccagagatcaggaaggaccactttgaagaggcaatg
cgatttgctcgtcggtctgtcagcgacaacgacatccgcaaatacgagatgtttgctcag
acactgcagcaaagccgaggctttggcagcttcaggtttccctccagtactgcaggtggc
agcggtccaagtcacagctcaggtggaactggtactggtccagtgttcaacgaagataac
gatgatgatctttacggataa
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